RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
CHL1-208ENST00000453040 HRCP23327 699 aa18.98■□□□□ 0.63
CHL1-208ENST00000453040 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
CHL1-208ENST00000453040 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
CHL1-208ENST00000453040 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
CHL1-208ENST00000453040 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.57
CHL1-208ENST00000453040 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
CHL1-208ENST00000453040 MYT1Q01538 1121 aa18.27■□□□□ 0.52
CHL1-208ENST00000453040 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
CHL1-208ENST00000453040 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
CHL1-208ENST00000453040 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
CHL1-208ENST00000453040 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
CHL1-208ENST00000453040 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
CHL1-208ENST00000453040 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
CHL1-208ENST00000453040 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
CHL1-208ENST00000453040 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
CHL1-208ENST00000453040 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
CHL1-208ENST00000453040 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
CHL1-208ENST00000453040 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
CHL1-208ENST00000453040 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.41
CHL1-208ENST00000453040 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
CHL1-208ENST00000453040 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
CHL1-208ENST00000453040 ABCC9O60706 1549 aa17.49■□□□□ 0.39
CHL1-208ENST00000453040 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
CHL1-208ENST00000453040 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
CHL1-208ENST00000453040 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
CHL1-208ENST00000453040 RB1CC1Q8TDY2 1594 aa17.18■□□□□ 0.34
CHL1-208ENST00000453040 APLP2Q06481 763 aa17.18■□□□□ 0.34
CHL1-208ENST00000453040 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
CHL1-208ENST00000453040 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
CHL1-208ENST00000453040 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
CHL1-208ENST00000453040 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
CHL1-208ENST00000453040 ANP32EQ9BTT0 268 aa16.97■□□□□ 0.31
CHL1-208ENST00000453040 CENPBP07199 599 aaPredicted RBP16.96■□□□□ 0.3
CHL1-208ENST00000453040 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
CHL1-208ENST00000453040 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
CHL1-208ENST00000453040 TSHZ2Q9NRE2 1034 aa16.76■□□□□ 0.27
CHL1-208ENST00000453040 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
CHL1-208ENST00000453040 WIZO95785 1651 aa16.75■□□□□ 0.27
CHL1-208ENST00000453040 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
CHL1-208ENST00000453040 CECR2Q9BXF3 1484 aa16.71■□□□□ 0.27
CHL1-208ENST00000453040 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
CHL1-208ENST00000453040 NACADO15069 1562 aa16.7■□□□□ 0.26
CHL1-208ENST00000453040 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
CHL1-208ENST00000453040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
CHL1-208ENST00000453040 ANO8Q9HCE9 1232 aaPredicted RBP16.54■□□□□ 0.24
CHL1-208ENST00000453040 ERICH6Q7L0X2 663 aa16.53■□□□□ 0.24
CHL1-208ENST00000453040 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
CHL1-208ENST00000453040 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
CHL1-208ENST00000453040 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
CHL1-208ENST00000453040 MSH5O43196 834 aa16.45■□□□□ 0.22
CHL1-208ENST00000453040 CEP162Q5TB80 1403 aa16.44■□□□□ 0.22
CHL1-208ENST00000453040 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
CHL1-208ENST00000453040 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
CHL1-208ENST00000453040 MIER1Q8N108 512 aa16.4■□□□□ 0.22
CHL1-208ENST00000453040 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
CHL1-208ENST00000453040 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
CHL1-208ENST00000453040 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
CHL1-208ENST00000453040 SOGA1O94964 1423 aa16.34■□□□□ 0.21
CHL1-208ENST00000453040 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
CHL1-208ENST00000453040 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
CHL1-208ENST00000453040 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
CHL1-208ENST00000453040 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
CHL1-208ENST00000453040 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
CHL1-208ENST00000453040 KIF21BO75037 1637 aa16.27■□□□□ 0.2
CHL1-208ENST00000453040 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
CHL1-208ENST00000453040 UBE2Q2Q8WVN8 375 aa16.22■□□□□ 0.19
CHL1-208ENST00000453040 EEA1Q15075 1411 aa16.21■□□□□ 0.19
CHL1-208ENST00000453040 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
CHL1-208ENST00000453040 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
CHL1-208ENST00000453040 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
CHL1-208ENST00000453040 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
CHL1-208ENST00000453040 CLIP1P30622 1438 aa16.07■□□□□ 0.16
CHL1-208ENST00000453040 CUX2O14529 1486 aa16.06■□□□□ 0.16
CHL1-208ENST00000453040 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
CHL1-208ENST00000453040 CCDC136Q96JN2 1154 aa16.04■□□□□ 0.16
CHL1-208ENST00000453040 CLSPNQ9HAW4 1339 aa16.03■□□□□ 0.16
CHL1-208ENST00000453040 VPS8Q8N3P4 1428 aa16.03■□□□□ 0.16
CHL1-208ENST00000453040 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
CHL1-208ENST00000453040 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
CHL1-208ENST00000453040 RAPGEF2Q9Y4G8 1499 aa15.93■□□□□ 0.14
CHL1-208ENST00000453040 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
CHL1-208ENST00000453040 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
CHL1-208ENST00000453040 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
CHL1-208ENST00000453040 RRBP1Q9P2E9 1410 aaKnown RBP15.89■□□□□ 0.13
CHL1-208ENST00000453040 MAPKBP1O60336 1514 aa15.89■□□□□ 0.13
CHL1-208ENST00000453040 DEKP35659 375 aaKnown RBP15.89■□□□□ 0.13
CHL1-208ENST00000453040 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
CHL1-208ENST00000453040 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
CHL1-208ENST00000453040 FANCIQ9NVI1 1328 aa15.86■□□□□ 0.13
CHL1-208ENST00000453040 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
CHL1-208ENST00000453040 KCNH8Q96L42 1107 aa15.83■□□□□ 0.12
CHL1-208ENST00000453040 PRXQ9BXM0 1461 aa15.82■□□□□ 0.12
CHL1-208ENST00000453040 IL27Q8NEV9 243 aa15.8■□□□□ 0.12
CHL1-208ENST00000453040 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.11
CHL1-208ENST00000453040 ERICH6BQ5W0A0 696 aa15.74■□□□□ 0.11
CHL1-208ENST00000453040 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.71■□□□□ 0.11
CHL1-208ENST00000453040 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
CHL1-208ENST00000453040 UBTFP17480 764 aaKnown RBP15.69■□□□□ 0.1
CHL1-208ENST00000453040 SLC24A1O60721 1099 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms