RNA–Protein interactions for RNA: ENST00000452879.1

TRIM60P19-201, Transcript of tripartite motif containing 60 pseudogene 19, humanhuman

BASIC

Gene TRIM60P19, Length 1,462 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60P19-201ENST00000452879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM60P19-201ENST00000452879 NEFLP07196 543 aa12.36□□□□□ -0.43
TRIM60P19-201ENST00000452879 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
TRIM60P19-201ENST00000452879 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
TRIM60P19-201ENST00000452879 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
TRIM60P19-201ENST00000452879 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
TRIM60P19-201ENST00000452879 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
TRIM60P19-201ENST00000452879 RAPGEF2Q9Y4G8 1499 aa12.29□□□□□ -0.44
TRIM60P19-201ENST00000452879 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
TRIM60P19-201ENST00000452879 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
TRIM60P19-201ENST00000452879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRIM60P19-201ENST00000452879 BIVM-ERCC5R4GMW8 1640 aa12.25□□□□□ -0.45
TRIM60P19-201ENST00000452879 ARAP1Q96P48 1450 aa12.24□□□□□ -0.45
TRIM60P19-201ENST00000452879 FKBP8Q14318 412 aa12.23□□□□□ -0.45
TRIM60P19-201ENST00000452879 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.45
TRIM60P19-201ENST00000452879 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
TRIM60P19-201ENST00000452879 ANP32CO43423 234 aa12.19□□□□□ -0.46
TRIM60P19-201ENST00000452879 CDK11AQ9UQ88 783 aaPredicted RBP12.18□□□□□ -0.46
TRIM60P19-201ENST00000452879 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
TRIM60P19-201ENST00000452879 RAB3GAP2Q9H2M9 1393 aa12.16□□□□□ -0.46
TRIM60P19-201ENST00000452879 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
TRIM60P19-201ENST00000452879 ERICH6Q7L0X2 663 aa12.14□□□□□ -0.47
TRIM60P19-201ENST00000452879 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
TRIM60P19-201ENST00000452879 UNC13AQ9UPW8 1703 aa12.13□□□□□ -0.47
TRIM60P19-201ENST00000452879 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
TRIM60P19-201ENST00000452879 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
TRIM60P19-201ENST00000452879 TIAM1Q13009 1591 aa12.08□□□□□ -0.47
TRIM60P19-201ENST00000452879 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.48
TRIM60P19-201ENST00000452879 PPP4R2Q9NY27 417 aa12.08□□□□□ -0.48
TRIM60P19-201ENST00000452879 DSG3P32926 999 aa12.07□□□□□ -0.48
TRIM60P19-201ENST00000452879 DDX10Q13206 875 aaKnown RBP12.07□□□□□ -0.48
TRIM60P19-201ENST00000452879 WDR97A6NE52 1622 aa12.06□□□□□ -0.48
TRIM60P19-201ENST00000452879 LRRC9Q6ZRR7 1453 aa12.05□□□□□ -0.48
TRIM60P19-201ENST00000452879 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
TRIM60P19-201ENST00000452879 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.48
TRIM60P19-201ENST00000452879 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
TRIM60P19-201ENST00000452879 CAPN15O75808 1086 aa12.01□□□□□ -0.49
TRIM60P19-201ENST00000452879 BCANQ96GW7 911 aa12.01□□□□□ -0.49
TRIM60P19-201ENST00000452879 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
TRIM60P19-201ENST00000452879 HMGXB3Q12766 1538 aa12□□□□□ -0.49
TRIM60P19-201ENST00000452879 CFAP43Q8NDM7 1665 aa11.98□□□□□ -0.49
TRIM60P19-201ENST00000452879 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
TRIM60P19-201ENST00000452879 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
TRIM60P19-201ENST00000452879 TONSLQ96HA7 1378 aa11.96□□□□□ -0.5
TRIM60P19-201ENST00000452879 NCAPD3P42695 1498 aa11.96□□□□□ -0.5
TRIM60P19-201ENST00000452879 EFCAB5A4FU69 1503 aa11.95□□□□□ -0.5
TRIM60P19-201ENST00000452879 FYCO1Q9BQS8 1478 aa11.94□□□□□ -0.5
TRIM60P19-201ENST00000452879 CUX1P39880 1505 aa11.94□□□□□ -0.5
TRIM60P19-201ENST00000452879 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
TRIM60P19-201ENST00000452879 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
TRIM60P19-201ENST00000452879 CFTRP13569 1480 aa11.93□□□□□ -0.5
TRIM60P19-201ENST00000452879 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
TRIM60P19-201ENST00000452879 ZBED9Q6R2W3 1325 aa11.93□□□□□ -0.5
TRIM60P19-201ENST00000452879 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
TRIM60P19-201ENST00000452879 CCDC18Q5T9S5 1454 aa11.93□□□□□ -0.5
TRIM60P19-201ENST00000452879 DEKP35659 375 aaKnown RBP11.92□□□□□ -0.5
TRIM60P19-201ENST00000452879 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
TRIM60P19-201ENST00000452879 PHLDB1Q86UU1 1377 aa11.92□□□□□ -0.5
TRIM60P19-201ENST00000452879 NOP58Q9Y2X3 529 aaKnown RBP11.91□□□□□ -0.5
TRIM60P19-201ENST00000452879 IGF1RP08069 1367 aa11.91□□□□□ -0.5
TRIM60P19-201ENST00000452879 CASKIN1Q8WXD9 1431 aa11.9□□□□□ -0.5
TRIM60P19-201ENST00000452879 AKNAQ7Z591 1439 aa11.9□□□□□ -0.51
TRIM60P19-201ENST00000452879 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM60P19-201ENST00000452879 SIN3AQ96ST3 1273 aa11.89□□□□□ -0.51
TRIM60P19-201ENST00000452879 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
TRIM60P19-201ENST00000452879 CARMIL1Q5VZK9 1371 aa11.87□□□□□ -0.51
TRIM60P19-201ENST00000452879 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
TRIM60P19-201ENST00000452879 ITGAEP38570 1179 aa11.87□□□□□ -0.51
TRIM60P19-201ENST00000452879 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
TRIM60P19-201ENST00000452879 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
TRIM60P19-201ENST00000452879 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
TRIM60P19-201ENST00000452879 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
TRIM60P19-201ENST00000452879 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
TRIM60P19-201ENST00000452879 FGD6Q6ZV73 1430 aa11.84□□□□□ -0.51
TRIM60P19-201ENST00000452879 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
TRIM60P19-201ENST00000452879 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
TRIM60P19-201ENST00000452879 ARID4BQ4LE39 1312 aaPredicted RBP11.84□□□□□ -0.51
TRIM60P19-201ENST00000452879 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIM60P19-201ENST00000452879 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
TRIM60P19-201ENST00000452879 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
TRIM60P19-201ENST00000452879 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
TRIM60P19-201ENST00000452879 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
TRIM60P19-201ENST00000452879 NCOA1Q15788 1441 aa11.8□□□□□ -0.52
TRIM60P19-201ENST00000452879 KDM5BQ9UGL1 1544 aa11.8□□□□□ -0.52
TRIM60P19-201ENST00000452879 ABCA5Q8WWZ7 1642 aa11.8□□□□□ -0.52
TRIM60P19-201ENST00000452879 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
TRIM60P19-201ENST00000452879 RANGAP1P46060 587 aaPredicted RBP11.8□□□□□ -0.52
TRIM60P19-201ENST00000452879 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
TRIM60P19-201ENST00000452879 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
TRIM60P19-201ENST00000452879 NAIPQ13075 1403 aa11.79□□□□□ -0.52
TRIM60P19-201ENST00000452879 WASHC2AQ641Q2 1341 aa11.79□□□□□ -0.52
TRIM60P19-201ENST00000452879 PCF11O94913 1555 aaKnown RBP11.78□□□□□ -0.52
TRIM60P19-201ENST00000452879 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
TRIM60P19-201ENST00000452879 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
TRIM60P19-201ENST00000452879 MS4A1P11836 297 aa11.76□□□□□ -0.53
TRIM60P19-201ENST00000452879 CC2D2AQ9P2K1 1620 aa11.76□□□□□ -0.53
TRIM60P19-201ENST00000452879 MYOM3Q5VTT5 1437 aa11.76□□□□□ -0.53
TRIM60P19-201ENST00000452879 HECW1Q76N89 1606 aa11.75□□□□□ -0.53
TRIM60P19-201ENST00000452879 CCDC7Q96M83 1385 aa11.75□□□□□ -0.53
TRIM60P19-201ENST00000452879 TCERG1O14776 1098 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms