RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
DDB1-203ENST00000451943 MAGI1Q96QZ7 1491 aaPredicted RBP13.38□□□□□ -0.27
DDB1-203ENST00000451943 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
DDB1-203ENST00000451943 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
DDB1-203ENST00000451943 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
DDB1-203ENST00000451943 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
DDB1-203ENST00000451943 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
DDB1-203ENST00000451943 CLASP1Q7Z460 1538 aa13.33□□□□□ -0.28
DDB1-203ENST00000451943 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
DDB1-203ENST00000451943 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
DDB1-203ENST00000451943 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
DDB1-203ENST00000451943 PPARGC1BQ86YN6 1023 aaKnown RBP13.26□□□□□ -0.29
DDB1-203ENST00000451943 CUL7Q14999 1698 aa13.25□□□□□ -0.29
DDB1-203ENST00000451943 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
DDB1-203ENST00000451943 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
DDB1-203ENST00000451943 ARHGAP35Q9NRY4 1499 aa13.23□□□□□ -0.29
DDB1-203ENST00000451943 GRIN2AQ12879 1464 aa13.22□□□□□ -0.29
DDB1-203ENST00000451943 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
DDB1-203ENST00000451943 NUP160Q12769 1436 aa13.19□□□□□ -0.3
DDB1-203ENST00000451943 APLP2Q06481 763 aa13.18□□□□□ -0.3
DDB1-203ENST00000451943 ADAMTS12P58397 1594 aa13.18□□□□□ -0.3
DDB1-203ENST00000451943 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
DDB1-203ENST00000451943 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
DDB1-203ENST00000451943 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
DDB1-203ENST00000451943 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
DDB1-203ENST00000451943 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
DDB1-203ENST00000451943 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
DDB1-203ENST00000451943 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
DDB1-203ENST00000451943 CTTNBP2Q8WZ74 1663 aa13.1□□□□□ -0.31
DDB1-203ENST00000451943 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.32
DDB1-203ENST00000451943 PRG4Q92954 1404 aaPredicted RBP13.06□□□□□ -0.32
DDB1-203ENST00000451943 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
DDB1-203ENST00000451943 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
DDB1-203ENST00000451943 RRBP1Q9P2E9 1410 aaKnown RBP13.03□□□□□ -0.32
DDB1-203ENST00000451943 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
DDB1-203ENST00000451943 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
DDB1-203ENST00000451943 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
DDB1-203ENST00000451943 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
DDB1-203ENST00000451943 FMN1Q68DA7 1419 aa13□□□□□ -0.33
DDB1-203ENST00000451943 FHOD3Q2V2M9 1422 aa12.99□□□□□ -0.33
DDB1-203ENST00000451943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
DDB1-203ENST00000451943 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
DDB1-203ENST00000451943 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
DDB1-203ENST00000451943 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
DDB1-203ENST00000451943 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
DDB1-203ENST00000451943 CCER1Q8TC90 406 aaPredicted RBP12.98□□□□□ -0.33
DDB1-203ENST00000451943 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
DDB1-203ENST00000451943 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
DDB1-203ENST00000451943 CCNB3Q8WWL7 1395 aa12.93□□□□□ -0.34
DDB1-203ENST00000451943 NPM1P06748 294 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDB1-203ENST00000451943 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
DDB1-203ENST00000451943 UGGT2Q9NYU1 1516 aa12.92□□□□□ -0.34
DDB1-203ENST00000451943 KIF13AQ9H1H9 1805 aa12.91□□□□□ -0.34
DDB1-203ENST00000451943 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
DDB1-203ENST00000451943 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
DDB1-203ENST00000451943 PTPRGP23470 1445 aa12.88□□□□□ -0.35
DDB1-203ENST00000451943 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
DDB1-203ENST00000451943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
DDB1-203ENST00000451943 PHLDB1Q86UU1 1377 aa12.86□□□□□ -0.35
DDB1-203ENST00000451943 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
DDB1-203ENST00000451943 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
DDB1-203ENST00000451943 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
DDB1-203ENST00000451943 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
DDB1-203ENST00000451943 HECW1Q76N89 1606 aa12.81□□□□□ -0.36
DDB1-203ENST00000451943 LRRIQ1Q96JM4 1722 aa12.81□□□□□ -0.36
DDB1-203ENST00000451943 EHBP1L1Q8N3D4 1523 aa12.81□□□□□ -0.36
DDB1-203ENST00000451943 DISP1Q96F81 1524 aa12.81□□□□□ -0.36
DDB1-203ENST00000451943 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
DDB1-203ENST00000451943 DIP2BQ9P265 1576 aa12.8□□□□□ -0.36
DDB1-203ENST00000451943 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
DDB1-203ENST00000451943 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
DDB1-203ENST00000451943 DHX57Q6P158 1386 aaKnown RBP12.78□□□□□ -0.36
DDB1-203ENST00000451943 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
DDB1-203ENST00000451943 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.37
DDB1-203ENST00000451943 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
DDB1-203ENST00000451943 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.37
DDB1-203ENST00000451943 EPRSP07814 1512 aaKnown RBP12.77□□□□□ -0.37
DDB1-203ENST00000451943 NCOA2Q15596 1464 aa12.75□□□□□ -0.37
DDB1-203ENST00000451943 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
DDB1-203ENST00000451943 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
DDB1-203ENST00000451943 ASXL2Q76L83 1435 aa12.74□□□□□ -0.37
DDB1-203ENST00000451943 SENP3Q9H4L4 574 aaPredicted RBP12.74□□□□□ -0.37
DDB1-203ENST00000451943 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
DDB1-203ENST00000451943 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
DDB1-203ENST00000451943 MYOM3Q5VTT5 1437 aa12.73□□□□□ -0.37
DDB1-203ENST00000451943 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
DDB1-203ENST00000451943 RAB3GAP2Q9H2M9 1393 aa12.71□□□□□ -0.37
DDB1-203ENST00000451943 KDM5BQ9UGL1 1544 aa12.71□□□□□ -0.38
DDB1-203ENST00000451943 RAPGEF6Q8TEU7 1601 aa12.7□□□□□ -0.38
DDB1-203ENST00000451943 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
DDB1-203ENST00000451943 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
DDB1-203ENST00000451943 GLI2P10070 1586 aa12.69□□□□□ -0.38
DDB1-203ENST00000451943 NUP153P49790 1475 aaKnown RBP12.69□□□□□ -0.38
DDB1-203ENST00000451943 MIA2Q96PC5 1412 aa12.69□□□□□ -0.38
DDB1-203ENST00000451943 CDK13Q14004 1512 aaKnown RBP12.67□□□□□ -0.38
DDB1-203ENST00000451943 ITGAEP38570 1179 aa12.67□□□□□ -0.38
DDB1-203ENST00000451943 KDM6BO15054 1643 aa12.66□□□□□ -0.38
DDB1-203ENST00000451943 PTPN23Q9H3S7 1636 aa12.66□□□□□ -0.38
DDB1-203ENST00000451943 PPRC1Q5VV67 1664 aaKnown RBP12.65□□□□□ -0.38
DDB1-203ENST00000451943 ZCCHC11Q5TAX3 1644 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms