RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 ITGAEP38570 1179 aa24.32■■□□□ 1.48
SCUBE2-202ENST00000450649 PRDM2Q13029 1718 aa24.31■■□□□ 1.48
SCUBE2-202ENST00000450649 TIAM1Q13009 1591 aa24.3■■□□□ 1.48
SCUBE2-202ENST00000450649 MAPKBP1O60336 1514 aa24.29■■□□□ 1.48
SCUBE2-202ENST00000450649 RAB3GAP2Q9H2M9 1393 aa24.28■■□□□ 1.48
SCUBE2-202ENST00000450649 MSH5O43196 834 aa24.27■■□□□ 1.48
SCUBE2-202ENST00000450649 TRIM52Q96A61 297 aa24.24■■□□□ 1.47
SCUBE2-202ENST00000450649 PPP1R15AO75807 674 aaPredicted RBP24.23■■□□□ 1.47
SCUBE2-202ENST00000450649 CARMIL1Q5VZK9 1371 aa24.23■■□□□ 1.47
SCUBE2-202ENST00000450649 LRRC9Q6ZRR7 1453 aa24.21■■□□□ 1.47
SCUBE2-202ENST00000450649 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
SCUBE2-202ENST00000450649 SETD5Q9C0A6 1442 aa24.19■■□□□ 1.46
SCUBE2-202ENST00000450649 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
SCUBE2-202ENST00000450649 CCER2I3L3R5 266 aa24.18■■□□□ 1.46
SCUBE2-202ENST00000450649 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
SCUBE2-202ENST00000450649 FHAD1B1AJZ9 1412 aa24.15■■□□□ 1.46
SCUBE2-202ENST00000450649 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.45
SCUBE2-202ENST00000450649 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
SCUBE2-202ENST00000450649 ANP32CO43423 234 aa24.12■■□□□ 1.45
SCUBE2-202ENST00000450649 FANCIQ9NVI1 1328 aa24.11■■□□□ 1.45
SCUBE2-202ENST00000450649 HIRIP3Q9BW71 556 aaPredicted RBP24.09■■□□□ 1.45
SCUBE2-202ENST00000450649 CFAP43Q8NDM7 1665 aa24.09■■□□□ 1.45
SCUBE2-202ENST00000450649 TIMELESSQ9UNS1 1208 aa24.04■■□□□ 1.44
SCUBE2-202ENST00000450649 ERICH6Q7L0X2 663 aa24.04■■□□□ 1.44
SCUBE2-202ENST00000450649 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
SCUBE2-202ENST00000450649 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
SCUBE2-202ENST00000450649 CDK11AQ9UQ88 783 aaPredicted RBP24.01■■□□□ 1.43
SCUBE2-202ENST00000450649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.43
SCUBE2-202ENST00000450649 FYCO1Q9BQS8 1478 aa23.97■■□□□ 1.43
SCUBE2-202ENST00000450649 EFCAB5A4FU69 1503 aa23.96■■□□□ 1.43
SCUBE2-202ENST00000450649 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.42
SCUBE2-202ENST00000450649 CASKIN1Q8WXD9 1431 aa23.94■■□□□ 1.42
SCUBE2-202ENST00000450649 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
SCUBE2-202ENST00000450649 IRX6P78412 446 aaPredicted RBP23.94■■□□□ 1.42
SCUBE2-202ENST00000450649 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
SCUBE2-202ENST00000450649 FHOD3Q2V2M9 1422 aa23.93■■□□□ 1.42
SCUBE2-202ENST00000450649 ABCA10Q8WWZ4 1543 aa23.92■■□□□ 1.42
SCUBE2-202ENST00000450649 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.42
SCUBE2-202ENST00000450649 ATP1B4Q9UN42 357 aaPredicted RBP23.88■■□□□ 1.41
SCUBE2-202ENST00000450649 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.41
SCUBE2-202ENST00000450649 CC2D2AQ9P2K1 1620 aa23.87■■□□□ 1.41
SCUBE2-202ENST00000450649 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
SCUBE2-202ENST00000450649 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
SCUBE2-202ENST00000450649 CUL7Q14999 1698 aa23.84■■□□□ 1.41
SCUBE2-202ENST00000450649 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
SCUBE2-202ENST00000450649 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
SCUBE2-202ENST00000450649 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
SCUBE2-202ENST00000450649 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
SCUBE2-202ENST00000450649 CTTNBP2Q8WZ74 1663 aa23.8■■□□□ 1.4
SCUBE2-202ENST00000450649 DEKP35659 375 aaKnown RBP23.8■■□□□ 1.4
SCUBE2-202ENST00000450649 ERICH6BQ5W0A0 696 aa23.77■■□□□ 1.4
SCUBE2-202ENST00000450649 PPP4R2Q9NY27 417 aa23.76■■□□□ 1.39
SCUBE2-202ENST00000450649 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
SCUBE2-202ENST00000450649 TONSLQ96HA7 1378 aa23.76■■□□□ 1.39
SCUBE2-202ENST00000450649 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
SCUBE2-202ENST00000450649 CCDC18Q5T9S5 1454 aa23.73■■□□□ 1.39
SCUBE2-202ENST00000450649 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
SCUBE2-202ENST00000450649 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
SCUBE2-202ENST00000450649 PTPRKQ15262 1439 aa23.68■■□□□ 1.38
SCUBE2-202ENST00000450649 PTPN23Q9H3S7 1636 aa23.67■■□□□ 1.38
SCUBE2-202ENST00000450649 SAMD9Q5K651 1589 aa23.66■■□□□ 1.38
SCUBE2-202ENST00000450649 PRKCSHP14314 528 aaPredicted RBP23.64■■□□□ 1.37
SCUBE2-202ENST00000450649 NAIPQ13075 1403 aa23.63■■□□□ 1.37
SCUBE2-202ENST00000450649 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
SCUBE2-202ENST00000450649 B4GALNT3Q6L9W6 998 aa23.63■■□□□ 1.37
SCUBE2-202ENST00000450649 NESP48681 1621 aa23.63■■□□□ 1.37
SCUBE2-202ENST00000450649 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
SCUBE2-202ENST00000450649 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
SCUBE2-202ENST00000450649 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
SCUBE2-202ENST00000450649 NOP58Q9Y2X3 529 aaKnown RBP23.6■■□□□ 1.37
SCUBE2-202ENST00000450649 LRRIQ1Q96JM4 1722 aa23.58■■□□□ 1.37
SCUBE2-202ENST00000450649 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
SCUBE2-202ENST00000450649 NBR1Q14596 966 aa23.57■■□□□ 1.36
SCUBE2-202ENST00000450649 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
SCUBE2-202ENST00000450649 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
SCUBE2-202ENST00000450649 EHBP1L1Q8N3D4 1523 aa23.56■■□□□ 1.36
SCUBE2-202ENST00000450649 WASHC2AQ641Q2 1341 aa23.56■■□□□ 1.36
SCUBE2-202ENST00000450649 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
SCUBE2-202ENST00000450649 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
SCUBE2-202ENST00000450649 PAK3O75914 559 aaPredicted RBP23.54■■□□□ 1.36
SCUBE2-202ENST00000450649 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
SCUBE2-202ENST00000450649 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
SCUBE2-202ENST00000450649 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
SCUBE2-202ENST00000450649 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
SCUBE2-202ENST00000450649 UGGT2Q9NYU1 1516 aa23.51■■□□□ 1.35
SCUBE2-202ENST00000450649 HSPA5P11021 654 aaKnown RBP23.5■■□□□ 1.35
SCUBE2-202ENST00000450649 FAM9BQ8IZU0 186 aa23.47■■□□□ 1.35
SCUBE2-202ENST00000450649 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
SCUBE2-202ENST00000450649 TCOF1Q13428 1488 aaKnown RBP23.46■■□□□ 1.35
SCUBE2-202ENST00000450649 ZBED9Q6R2W3 1325 aa23.46■■□□□ 1.35
SCUBE2-202ENST00000450649 CNTLNQ9NXG0 1405 aa23.44■■□□□ 1.34
SCUBE2-202ENST00000450649 AKNAQ7Z591 1439 aa23.44■■□□□ 1.34
SCUBE2-202ENST00000450649 MAGI3Q5TCQ9 1506 aa23.43■■□□□ 1.34
SCUBE2-202ENST00000450649 PRKRIP1Q9H875 184 aaPredicted RBP23.41■■□□□ 1.34
SCUBE2-202ENST00000450649 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
SCUBE2-202ENST00000450649 MRS2Q9HD23 443 aa23.41■■□□□ 1.34
SCUBE2-202ENST00000450649 HECW1Q76N89 1606 aa23.4■■□□□ 1.34
SCUBE2-202ENST00000450649 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.34
SCUBE2-202ENST00000450649 DENND4BO75064 1496 aaPredicted RBP23.39■■□□□ 1.34
SCUBE2-202ENST00000450649 RRP7BPQ9NSQ0 103 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms