RNA–Protein interactions for RNA: ENST00000449739.6

COX18-203, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

TSL 1 (best)

Gene COX18, Length 3,027 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-203ENST00000449739 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.81
COX18-203ENST00000449739 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
COX18-203ENST00000449739 FHOD3Q2V2M9 1422 aa20.04■□□□□ 0.8
COX18-203ENST00000449739 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
COX18-203ENST00000449739 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
COX18-203ENST00000449739 HIRIP3Q9BW71 556 aaPredicted RBP20.02■□□□□ 0.79
COX18-203ENST00000449739 RAB3GAP2Q9H2M9 1393 aa20■□□□□ 0.79
COX18-203ENST00000449739 PHLDB1Q86UU1 1377 aa19.98■□□□□ 0.79
COX18-203ENST00000449739 BCANQ96GW7 911 aa19.98■□□□□ 0.79
COX18-203ENST00000449739 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
COX18-203ENST00000449739 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
COX18-203ENST00000449739 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.77
COX18-203ENST00000449739 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
COX18-203ENST00000449739 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
COX18-203ENST00000449739 TSHZ2Q9NRE2 1034 aa19.87■□□□□ 0.77
COX18-203ENST00000449739 TIAM1Q13009 1591 aa19.85■□□□□ 0.77
COX18-203ENST00000449739 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
COX18-203ENST00000449739 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
COX18-203ENST00000449739 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.76
COX18-203ENST00000449739 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.76
COX18-203ENST00000449739 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
COX18-203ENST00000449739 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
COX18-203ENST00000449739 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
COX18-203ENST00000449739 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
COX18-203ENST00000449739 FKBP8Q14318 412 aa19.76■□□□□ 0.75
COX18-203ENST00000449739 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
COX18-203ENST00000449739 ABCA10Q8WWZ4 1543 aa19.75■□□□□ 0.75
COX18-203ENST00000449739 RRP7BPQ9NSQ0 103 aa19.74■□□□□ 0.75
COX18-203ENST00000449739 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
COX18-203ENST00000449739 GAPVD1Q14C86 1478 aa19.69■□□□□ 0.74
COX18-203ENST00000449739 MAPKBP1O60336 1514 aa19.69■□□□□ 0.74
COX18-203ENST00000449739 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
COX18-203ENST00000449739 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
COX18-203ENST00000449739 CASKIN1Q8WXD9 1431 aa19.65■□□□□ 0.74
COX18-203ENST00000449739 FBLN2P98095 1184 aa19.65■□□□□ 0.74
COX18-203ENST00000449739 FMN1Q68DA7 1419 aa19.64■□□□□ 0.73
COX18-203ENST00000449739 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
COX18-203ENST00000449739 FYCO1Q9BQS8 1478 aa19.61■□□□□ 0.73
COX18-203ENST00000449739 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
COX18-203ENST00000449739 ANP32EQ9BTT0 268 aa19.6■□□□□ 0.73
COX18-203ENST00000449739 FGD6Q6ZV73 1430 aa19.6■□□□□ 0.73
COX18-203ENST00000449739 FOXD1Q16676 465 aa19.6■□□□□ 0.73
COX18-203ENST00000449739 MAP3K1Q13233 1512 aa19.58■□□□□ 0.73
COX18-203ENST00000449739 PTPRKQ15262 1439 aa19.58■□□□□ 0.73
COX18-203ENST00000449739 PPP1R15AO75807 674 aaPredicted RBP19.57■□□□□ 0.72
COX18-203ENST00000449739 CNGB1Q14028 1251 aaPredicted RBP19.54■□□□□ 0.72
COX18-203ENST00000449739 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
COX18-203ENST00000449739 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
COX18-203ENST00000449739 NCOA2Q15596 1464 aa19.52■□□□□ 0.72
COX18-203ENST00000449739 CCDC18Q5T9S5 1454 aa19.51■□□□□ 0.71
COX18-203ENST00000449739 CUL7Q14999 1698 aa19.51■□□□□ 0.71
COX18-203ENST00000449739 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
COX18-203ENST00000449739 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
COX18-203ENST00000449739 NEFLP07196 543 aa19.49■□□□□ 0.71
COX18-203ENST00000449739 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
COX18-203ENST00000449739 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
COX18-203ENST00000449739 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
COX18-203ENST00000449739 CTTNBP2Q8WZ74 1663 aa19.48■□□□□ 0.71
COX18-203ENST00000449739 ANP32CO43423 234 aa19.47■□□□□ 0.71
COX18-203ENST00000449739 RBM19Q9Y4C8 960 aaKnown RBP19.46■□□□□ 0.71
COX18-203ENST00000449739 ZNF644Q9H582 1327 aaPredicted RBP19.46■□□□□ 0.71
COX18-203ENST00000449739 MYOM3Q5VTT5 1437 aa19.46■□□□□ 0.71
COX18-203ENST00000449739 CDK13Q14004 1512 aaKnown RBP19.43■□□□□ 0.7
COX18-203ENST00000449739 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
COX18-203ENST00000449739 ABCA5Q8WWZ7 1642 aa19.41■□□□□ 0.7
COX18-203ENST00000449739 NAIPQ13075 1403 aa19.41■□□□□ 0.7
COX18-203ENST00000449739 GRIN2BQ13224 1484 aa19.39■□□□□ 0.7
COX18-203ENST00000449739 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
COX18-203ENST00000449739 MAGI3Q5TCQ9 1506 aa19.38■□□□□ 0.69
COX18-203ENST00000449739 HFM1A2PYH4 1435 aa19.38■□□□□ 0.69
COX18-203ENST00000449739 ZNF326Q5BKZ1 582 aaKnown RBP19.38■□□□□ 0.69
COX18-203ENST00000449739 POLR3GLQ9BT43 218 aa19.38■□□□□ 0.69
COX18-203ENST00000449739 UACAQ9BZF9 1416 aa19.37■□□□□ 0.69
COX18-203ENST00000449739 MPHOSPH9Q99550 1183 aa19.35■□□□□ 0.69
COX18-203ENST00000449739 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
COX18-203ENST00000449739 LRRIQ1Q96JM4 1722 aa19.33■□□□□ 0.69
COX18-203ENST00000449739 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.69
COX18-203ENST00000449739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.33■□□□□ 0.69
COX18-203ENST00000449739 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
COX18-203ENST00000449739 HSPA5P11021 654 aaKnown RBP19.32■□□□□ 0.68
COX18-203ENST00000449739 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
COX18-203ENST00000449739 PTPN23Q9H3S7 1636 aa19.31■□□□□ 0.68
COX18-203ENST00000449739 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
COX18-203ENST00000449739 EPRSP07814 1512 aaKnown RBP19.31■□□□□ 0.68
COX18-203ENST00000449739 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
COX18-203ENST00000449739 CCER2I3L3R5 266 aa19.3■□□□□ 0.68
COX18-203ENST00000449739 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
COX18-203ENST00000449739 SUPT6HQ7KZ85 1726 aaKnown RBP19.29■□□□□ 0.68
COX18-203ENST00000449739 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
COX18-203ENST00000449739 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
COX18-203ENST00000449739 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
COX18-203ENST00000449739 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
COX18-203ENST00000449739 MSH5O43196 834 aa19.28■□□□□ 0.68
COX18-203ENST00000449739 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
COX18-203ENST00000449739 CFDP1Q9UEE9 299 aaPredicted RBP19.27■□□□□ 0.67
COX18-203ENST00000449739 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
COX18-203ENST00000449739 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
COX18-203ENST00000449739 UGGT2Q9NYU1 1516 aa19.24■□□□□ 0.67
COX18-203ENST00000449739 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
COX18-203ENST00000449739 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms