RNA–Protein interactions for RNA: ENST00000449739.6

COX18-203, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

TSL 1 (best)

Gene COX18, Length 3,027 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-203ENST00000449739 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
COX18-203ENST00000449739 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
COX18-203ENST00000449739 DCAF8L2P0C7V8 631 aa24.38■■□□□ 1.49
COX18-203ENST00000449739 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
COX18-203ENST00000449739 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
COX18-203ENST00000449739 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
COX18-203ENST00000449739 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
COX18-203ENST00000449739 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
COX18-203ENST00000449739 PCGF6Q9BYE7 350 aa23.01■■□□□ 1.27
COX18-203ENST00000449739 HRCP23327 699 aa22.99■■□□□ 1.27
COX18-203ENST00000449739 PPARGC1BQ86YN6 1023 aaKnown RBP22.87■■□□□ 1.25
COX18-203ENST00000449739 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
COX18-203ENST00000449739 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
COX18-203ENST00000449739 ABCC9O60706 1549 aa22.7■■□□□ 1.22
COX18-203ENST00000449739 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
COX18-203ENST00000449739 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
COX18-203ENST00000449739 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
COX18-203ENST00000449739 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
COX18-203ENST00000449739 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
COX18-203ENST00000449739 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
COX18-203ENST00000449739 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
COX18-203ENST00000449739 TRIM26Q12899 539 aaPredicted RBP22.14■■□□□ 1.13
COX18-203ENST00000449739 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
COX18-203ENST00000449739 NACADO15069 1562 aa22■■□□□ 1.11
COX18-203ENST00000449739 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
COX18-203ENST00000449739 WIZO95785 1651 aa21.88■■□□□ 1.09
COX18-203ENST00000449739 TTBK1Q5TCY1 1321 aaPredicted RBP21.86■■□□□ 1.09
COX18-203ENST00000449739 ZEB1P37275 1124 aaPredicted RBP21.64■■□□□ 1.05
COX18-203ENST00000449739 SCAF1Q9H7N4 1312 aaKnown RBP21.62■■□□□ 1.05
COX18-203ENST00000449739 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
COX18-203ENST00000449739 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
COX18-203ENST00000449739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
COX18-203ENST00000449739 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
COX18-203ENST00000449739 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
COX18-203ENST00000449739 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
COX18-203ENST00000449739 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
COX18-203ENST00000449739 SOGA1O94964 1423 aa21.38■■□□□ 1.01
COX18-203ENST00000449739 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
COX18-203ENST00000449739 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
COX18-203ENST00000449739 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
COX18-203ENST00000449739 SMARCA2P51531 1590 aa21.28■■□□□ 1
COX18-203ENST00000449739 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
COX18-203ENST00000449739 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
COX18-203ENST00000449739 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
COX18-203ENST00000449739 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
COX18-203ENST00000449739 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
COX18-203ENST00000449739 CEP162Q5TB80 1403 aa21.16■□□□□ 0.98
COX18-203ENST00000449739 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
COX18-203ENST00000449739 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
COX18-203ENST00000449739 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
COX18-203ENST00000449739 WRNQ14191 1432 aaPredicted RBP eCLIP21.1■□□□□ 0.97
COX18-203ENST00000449739 GTF3C3Q9Y5Q9 886 aa21.07■□□□□ 0.96
COX18-203ENST00000449739 HNRNPUL2Q1KMD3 747 aaKnown RBP21.04■□□□□ 0.96
COX18-203ENST00000449739 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
COX18-203ENST00000449739 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
COX18-203ENST00000449739 TNIKQ9UKE5 1360 aa20.99■□□□□ 0.95
COX18-203ENST00000449739 YTHDC1Q96MU7 727 aaKnown RBP20.95■□□□□ 0.94
COX18-203ENST00000449739 APLP2Q06481 763 aa20.92■□□□□ 0.94
COX18-203ENST00000449739 GOLGA3Q08378 1498 aa20.89■□□□□ 0.94
COX18-203ENST00000449739 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
COX18-203ENST00000449739 CENPBP07199 599 aaPredicted RBP20.87■□□□□ 0.93
COX18-203ENST00000449739 EEA1Q15075 1411 aa20.85■□□□□ 0.93
COX18-203ENST00000449739 CLIP1P30622 1438 aa20.81■□□□□ 0.92
COX18-203ENST00000449739 RAPGEF2Q9Y4G8 1499 aa20.78■□□□□ 0.92
COX18-203ENST00000449739 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
COX18-203ENST00000449739 ZNF316A6NFI3 1004 aaPredicted RBP20.73■□□□□ 0.91
COX18-203ENST00000449739 PEG3Q9GZU2 1588 aa20.73■□□□□ 0.91
COX18-203ENST00000449739 MIER1Q8N108 512 aa20.67■□□□□ 0.9
COX18-203ENST00000449739 ITGAEP38570 1179 aa20.66■□□□□ 0.9
COX18-203ENST00000449739 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
COX18-203ENST00000449739 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
COX18-203ENST00000449739 KANK4Q5T7N3 995 aaPredicted RBP20.56■□□□□ 0.88
COX18-203ENST00000449739 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
COX18-203ENST00000449739 KIF21BO75037 1637 aa20.51■□□□□ 0.87
COX18-203ENST00000449739 TOP2BQ02880 1626 aa20.47■□□□□ 0.87
COX18-203ENST00000449739 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
COX18-203ENST00000449739 CUX1P39880 1505 aa20.45■□□□□ 0.86
COX18-203ENST00000449739 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
COX18-203ENST00000449739 CUX2O14529 1486 aa20.36■□□□□ 0.85
COX18-203ENST00000449739 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
COX18-203ENST00000449739 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
COX18-203ENST00000449739 CFTRP13569 1480 aa20.34■□□□□ 0.85
COX18-203ENST00000449739 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
COX18-203ENST00000449739 BIVM-ERCC5R4GMW8 1640 aa20.28■□□□□ 0.84
COX18-203ENST00000449739 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
COX18-203ENST00000449739 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
COX18-203ENST00000449739 IGF1RP08069 1367 aa20.25■□□□□ 0.83
COX18-203ENST00000449739 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
COX18-203ENST00000449739 ARHGAP35Q9NRY4 1499 aa20.2■□□□□ 0.82
COX18-203ENST00000449739 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
COX18-203ENST00000449739 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
COX18-203ENST00000449739 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
COX18-203ENST00000449739 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
COX18-203ENST00000449739 NESP48681 1621 aa20.15■□□□□ 0.82
COX18-203ENST00000449739 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.82
COX18-203ENST00000449739 CCNB3Q8WWL7 1395 aa20.13■□□□□ 0.81
COX18-203ENST00000449739 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
COX18-203ENST00000449739 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
COX18-203ENST00000449739 MYT1Q01538 1121 aa20.09■□□□□ 0.81
COX18-203ENST00000449739 KCNH8Q96L42 1107 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms