RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 CFTRP13569 1480 aa29.07■■■□□ 2.24
SMARCD2-203ENST00000448276 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
SMARCD2-203ENST00000448276 PPP1R15AO75807 674 aaPredicted RBP29.04■■■□□ 2.24
SMARCD2-203ENST00000448276 NEFLP07196 543 aa29.04■■■□□ 2.24
SMARCD2-203ENST00000448276 CUX1P39880 1505 aa29.04■■■□□ 2.24
SMARCD2-203ENST00000448276 FAM50AQ14320 339 aaKnown RBP29■■■□□ 2.23
SMARCD2-203ENST00000448276 SETD5Q9C0A6 1442 aa28.98■■■□□ 2.23
SMARCD2-203ENST00000448276 KIF27Q86VH2 1401 aa28.97■■■□□ 2.23
SMARCD2-203ENST00000448276 PHLDB1Q86UU1 1377 aa28.9■■■□□ 2.22
SMARCD2-203ENST00000448276 ANP32CO43423 234 aa28.89■■■□□ 2.21
SMARCD2-203ENST00000448276 MSH5O43196 834 aa28.87■■■□□ 2.21
SMARCD2-203ENST00000448276 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
SMARCD2-203ENST00000448276 CC2D2AQ9P2K1 1620 aa28.85■■■□□ 2.21
SMARCD2-203ENST00000448276 ATP1B4Q9UN42 357 aaPredicted RBP28.85■■■□□ 2.21
SMARCD2-203ENST00000448276 IRX6P78412 446 aaPredicted RBP28.82■■■□□ 2.2
SMARCD2-203ENST00000448276 P3H3Q8IVL6 736 aa28.82■■■□□ 2.2
SMARCD2-203ENST00000448276 CCER2I3L3R5 266 aa28.81■■■□□ 2.2
SMARCD2-203ENST00000448276 TIAM1Q13009 1591 aa28.81■■■□□ 2.2
SMARCD2-203ENST00000448276 LRRC9Q6ZRR7 1453 aa28.76■■■□□ 2.2
SMARCD2-203ENST00000448276 IGF1RP08069 1367 aa28.69■■■□□ 2.18
SMARCD2-203ENST00000448276 HNRNPUQ00839 825 aaKnown RBP eCLIP28.65■■■□□ 2.18
SMARCD2-203ENST00000448276 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
SMARCD2-203ENST00000448276 TIMELESSQ9UNS1 1208 aa28.64■■■□□ 2.18
SMARCD2-203ENST00000448276 FGD5Q6ZNL6 1462 aa28.61■■■□□ 2.17
SMARCD2-203ENST00000448276 MAP3K1Q13233 1512 aa28.6■■■□□ 2.17
SMARCD2-203ENST00000448276 TONSLQ96HA7 1378 aa28.59■■■□□ 2.17
SMARCD2-203ENST00000448276 CARMIL1Q5VZK9 1371 aa28.58■■■□□ 2.17
SMARCD2-203ENST00000448276 FANCD2Q9BXW9 1451 aa28.58■■■□□ 2.17
SMARCD2-203ENST00000448276 CDK11AQ9UQ88 783 aaPredicted RBP28.55■■■□□ 2.16
SMARCD2-203ENST00000448276 NESP48681 1621 aa28.52■■■□□ 2.16
SMARCD2-203ENST00000448276 PCF11O94913 1555 aaKnown RBP28.51■■■□□ 2.15
SMARCD2-203ENST00000448276 ERICH6Q7L0X2 663 aa28.5■■■□□ 2.15
SMARCD2-203ENST00000448276 FANCIQ9NVI1 1328 aa28.48■■■□□ 2.15
SMARCD2-203ENST00000448276 FHOD3Q2V2M9 1422 aa28.47■■■□□ 2.15
SMARCD2-203ENST00000448276 FHAD1B1AJZ9 1412 aa28.45■■■□□ 2.15
SMARCD2-203ENST00000448276 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
SMARCD2-203ENST00000448276 CCDC184Q52MB2 194 aa28.42■■■□□ 2.14
SMARCD2-203ENST00000448276 CFAP43Q8NDM7 1665 aa28.41■■■□□ 2.14
SMARCD2-203ENST00000448276 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
SMARCD2-203ENST00000448276 CCDC18Q5T9S5 1454 aa28.38■■■□□ 2.13
SMARCD2-203ENST00000448276 PTPRKQ15262 1439 aa28.38■■■□□ 2.13
SMARCD2-203ENST00000448276 WASHC2AQ641Q2 1341 aa28.35■■■□□ 2.13
SMARCD2-203ENST00000448276 HSPA5P11021 654 aaKnown RBP28.33■■■□□ 2.13
SMARCD2-203ENST00000448276 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
SMARCD2-203ENST00000448276 B4GALNT3Q6L9W6 998 aa28.32■■■□□ 2.12
SMARCD2-203ENST00000448276 FGD6Q6ZV73 1430 aa28.31■■■□□ 2.12
SMARCD2-203ENST00000448276 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.123e-8■■■■□ 23.4
SMARCD2-203ENST00000448276 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
SMARCD2-203ENST00000448276 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
SMARCD2-203ENST00000448276 FAM9BQ8IZU0 186 aa28.28■■■□□ 2.12
SMARCD2-203ENST00000448276 PPP4R2Q9NY27 417 aa28.28■■■□□ 2.12
SMARCD2-203ENST00000448276 UACAQ9BZF9 1416 aa28.28■■■□□ 2.12
SMARCD2-203ENST00000448276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.25■■■□□ 2.119e-6■□□□□ 9.6
SMARCD2-203ENST00000448276 KDM5BQ9UGL1 1544 aa28.24■■■□□ 2.11
SMARCD2-203ENST00000448276 FYCO1Q9BQS8 1478 aa28.23■■■□□ 2.11
SMARCD2-203ENST00000448276 HFM1A2PYH4 1435 aa28.22■■■□□ 2.11
SMARCD2-203ENST00000448276 CASKIN1Q8WXD9 1431 aa28.22■■■□□ 2.11
SMARCD2-203ENST00000448276 ABCA10Q8WWZ4 1543 aa28.22■■■□□ 2.11
SMARCD2-203ENST00000448276 PTPN23Q9H3S7 1636 aa28.21■■■□□ 2.11
SMARCD2-203ENST00000448276 MTUS2Q5JR59 1369 aa28.2■■■□□ 2.11
SMARCD2-203ENST00000448276 RRP7BPQ9NSQ0 103 aa28.2■■■□□ 2.1
SMARCD2-203ENST00000448276 NAIPQ13075 1403 aa28.19■■■□□ 2.1
SMARCD2-203ENST00000448276 CHIC2Q9UKJ5 165 aa28.19■■■□□ 2.1
SMARCD2-203ENST00000448276 C11orf95C9JLR9 678 aaPredicted RBP28.19■■■□□ 2.1
SMARCD2-203ENST00000448276 DEKP35659 375 aaKnown RBP28.16■■■□□ 2.1
SMARCD2-203ENST00000448276 URB2Q14146 1524 aaKnown RBP28.16■■■□□ 2.1
SMARCD2-203ENST00000448276 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
SMARCD2-203ENST00000448276 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
SMARCD2-203ENST00000448276 MRS2Q9HD23 443 aa28.13■■■□□ 2.09
SMARCD2-203ENST00000448276 EIF4G2P78344 907 aaKnown RBP eCLIP28.12■■■□□ 2.09
SMARCD2-203ENST00000448276 NBR1Q14596 966 aa28.11■■■□□ 2.09
SMARCD2-203ENST00000448276 ERICH6BQ5W0A0 696 aa28.11■■■□□ 2.09
SMARCD2-203ENST00000448276 CNGB1Q14028 1251 aaPredicted RBP28.1■■■□□ 2.09
SMARCD2-203ENST00000448276 FOXD1Q16676 465 aa28.1■■■□□ 2.09
SMARCD2-203ENST00000448276 PRKRIP1Q9H875 184 aaPredicted RBP28.1■■■□□ 2.09
SMARCD2-203ENST00000448276 PDS5BQ9NTI5 1447 aa28.08■■■□□ 2.09
SMARCD2-203ENST00000448276 PAK3O75914 559 aaPredicted RBP28.08■■■□□ 2.09
SMARCD2-203ENST00000448276 CNTLNQ9NXG0 1405 aa28.07■■■□□ 2.08
SMARCD2-203ENST00000448276 SENP3-EIF4A1A0A087X0R7 540 aa28.06■■■□□ 2.08
SMARCD2-203ENST00000448276 FMN1Q68DA7 1419 aa28.05■■■□□ 2.08
SMARCD2-203ENST00000448276 NCOA2Q15596 1464 aa28.04■■■□□ 2.08
SMARCD2-203ENST00000448276 L3MBTL2Q969R5 705 aa28.03■■■□□ 2.08
SMARCD2-203ENST00000448276 EFCAB5A4FU69 1503 aa28.02■■■□□ 2.08
SMARCD2-203ENST00000448276 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
SMARCD2-203ENST00000448276 MYOM3Q5VTT5 1437 aa28.01■■■□□ 2.07
SMARCD2-203ENST00000448276 DENND4BO75064 1496 aaPredicted RBP28.01■■■□□ 2.07
SMARCD2-203ENST00000448276 NOP58Q9Y2X3 529 aaKnown RBP28.01■■■□□ 2.07
SMARCD2-203ENST00000448276 ZBED9Q6R2W3 1325 aa28■■■□□ 2.07
SMARCD2-203ENST00000448276 CCDC7Q96M83 1385 aa27.98■■■□□ 2.07
SMARCD2-203ENST00000448276 CUL7Q14999 1698 aa27.95■■■□□ 2.07
SMARCD2-203ENST00000448276 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.06
SMARCD2-203ENST00000448276 NBPF8Q3BBV2 869 aa27.93■■■□□ 2.06
SMARCD2-203ENST00000448276 MPHOSPH9Q99550 1183 aa27.93■■■□□ 2.06
SMARCD2-203ENST00000448276 AKNAQ7Z591 1439 aa27.93■■■□□ 2.06
SMARCD2-203ENST00000448276 LRRIQ1Q96JM4 1722 aa27.93■■■□□ 2.06
SMARCD2-203ENST00000448276 KDM6BO15054 1643 aa27.92■■■□□ 2.06
SMARCD2-203ENST00000448276 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
SMARCD2-203ENST00000448276 NCOA1Q15788 1441 aa27.91■■■□□ 2.06
SMARCD2-203ENST00000448276 MYT1LQ9UL68 1186 aa27.9■■■□□ 2.06
SMARCD2-203ENST00000448276 KIF7Q2M1P5 1343 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms