RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PHLDB1Q86UU1 1377 aa20.31■□□□□ 0.84
ERCC3-203ENST00000445889 MAPKBP1O60336 1514 aa20.28■□□□□ 0.84
ERCC3-203ENST00000445889 SETD5Q9C0A6 1442 aa20.26■□□□□ 0.83
ERCC3-203ENST00000445889 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
ERCC3-203ENST00000445889 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
ERCC3-203ENST00000445889 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
ERCC3-203ENST00000445889 CFTRP13569 1480 aa20.21■□□□□ 0.83
ERCC3-203ENST00000445889 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
ERCC3-203ENST00000445889 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
ERCC3-203ENST00000445889 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
ERCC3-203ENST00000445889 ANP32EQ9BTT0 268 aa20.13■□□□□ 0.81
ERCC3-203ENST00000445889 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
ERCC3-203ENST00000445889 ANP32CO43423 234 aa20.12■□□□□ 0.81
ERCC3-203ENST00000445889 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
ERCC3-203ENST00000445889 NEFLP07196 543 aa20.08■□□□□ 0.81
ERCC3-203ENST00000445889 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.81
ERCC3-203ENST00000445889 HMGXB3Q12766 1538 aa20.08■□□□□ 0.8
ERCC3-203ENST00000445889 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
ERCC3-203ENST00000445889 TONSLQ96HA7 1378 aa20.02■□□□□ 0.79
ERCC3-203ENST00000445889 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.79
ERCC3-203ENST00000445889 RBM19Q9Y4C8 960 aaKnown RBP20.01■□□□□ 0.79
ERCC3-203ENST00000445889 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
ERCC3-203ENST00000445889 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
ERCC3-203ENST00000445889 PCF11O94913 1555 aaKnown RBP19.98■□□□□ 0.79
ERCC3-203ENST00000445889 ARID3CA6NKF2 412 aa19.97■□□□□ 0.79
ERCC3-203ENST00000445889 HNRNPUQ00839 825 aaKnown RBP eCLIP19.96■□□□□ 0.79
ERCC3-203ENST00000445889 RRP7BPQ9NSQ0 103 aa19.96■□□□□ 0.79
ERCC3-203ENST00000445889 CCER2I3L3R5 266 aa19.94■□□□□ 0.78
ERCC3-203ENST00000445889 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
ERCC3-203ENST00000445889 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
ERCC3-203ENST00000445889 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
ERCC3-203ENST00000445889 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
ERCC3-203ENST00000445889 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
ERCC3-203ENST00000445889 FOXD1Q16676 465 aa19.89■□□□□ 0.77
ERCC3-203ENST00000445889 CCDC184Q52MB2 194 aa19.87■□□□□ 0.77
ERCC3-203ENST00000445889 FGD6Q6ZV73 1430 aa19.86■□□□□ 0.77
ERCC3-203ENST00000445889 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
ERCC3-203ENST00000445889 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.773e-7■■■■■ 38
ERCC3-203ENST00000445889 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
ERCC3-203ENST00000445889 TDRD9Q8NDG6 1382 aaKnown RBP19.84■□□□□ 0.77
ERCC3-203ENST00000445889 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.77
ERCC3-203ENST00000445889 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
ERCC3-203ENST00000445889 NESP48681 1621 aa19.81■□□□□ 0.76
ERCC3-203ENST00000445889 SENP3-EIF4A1A0A087X0R7 540 aa19.81■□□□□ 0.76
ERCC3-203ENST00000445889 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
ERCC3-203ENST00000445889 MSH5O43196 834 aa19.8■□□□□ 0.76
ERCC3-203ENST00000445889 FAM9BQ8IZU0 186 aa19.79■□□□□ 0.76
ERCC3-203ENST00000445889 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
ERCC3-203ENST00000445889 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
ERCC3-203ENST00000445889 CFAP43Q8NDM7 1665 aa19.77■□□□□ 0.75
ERCC3-203ENST00000445889 C11orf95C9JLR9 678 aaPredicted RBP19.76■□□□□ 0.75
ERCC3-203ENST00000445889 BCL11AQ9H165 835 aa19.76■□□□□ 0.75
ERCC3-203ENST00000445889 UACAQ9BZF9 1416 aa19.76■□□□□ 0.75
ERCC3-203ENST00000445889 NAIPQ13075 1403 aa19.76■□□□□ 0.75
ERCC3-203ENST00000445889 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
ERCC3-203ENST00000445889 FMN1Q68DA7 1419 aa19.72■□□□□ 0.75
ERCC3-203ENST00000445889 NCOA2Q15596 1464 aa19.72■□□□□ 0.75
ERCC3-203ENST00000445889 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
ERCC3-203ENST00000445889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.71■□□□□ 0.75
ERCC3-203ENST00000445889 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
ERCC3-203ENST00000445889 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
ERCC3-203ENST00000445889 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
ERCC3-203ENST00000445889 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
ERCC3-203ENST00000445889 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
ERCC3-203ENST00000445889 SNAPC4Q5SXM2 1469 aa19.68■□□□□ 0.74
ERCC3-203ENST00000445889 ABCA10Q8WWZ4 1543 aa19.68■□□□□ 0.74
ERCC3-203ENST00000445889 B4GALNT3Q6L9W6 998 aa19.68■□□□□ 0.74
ERCC3-203ENST00000445889 MYOM3Q5VTT5 1437 aa19.67■□□□□ 0.74
ERCC3-203ENST00000445889 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
ERCC3-203ENST00000445889 MPHOSPH9Q99550 1183 aa19.67■□□□□ 0.74
ERCC3-203ENST00000445889 MRS2Q9HD23 443 aa19.65■□□□□ 0.74
ERCC3-203ENST00000445889 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
ERCC3-203ENST00000445889 EFCAB5A4FU69 1503 aa19.63■□□□□ 0.73
ERCC3-203ENST00000445889 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
ERCC3-203ENST00000445889 NBPF8Q3BBV2 869 aa19.62■□□□□ 0.73
ERCC3-203ENST00000445889 KDM5BQ9UGL1 1544 aa19.61■□□□□ 0.73
ERCC3-203ENST00000445889 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
ERCC3-203ENST00000445889 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
ERCC3-203ENST00000445889 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
ERCC3-203ENST00000445889 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
ERCC3-203ENST00000445889 ZNF644Q9H582 1327 aaPredicted RBP19.58■□□□□ 0.73
ERCC3-203ENST00000445889 DENND4BO75064 1496 aaPredicted RBP19.58■□□□□ 0.73
ERCC3-203ENST00000445889 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
ERCC3-203ENST00000445889 KDM6BO15054 1643 aa19.55■□□□□ 0.72
ERCC3-203ENST00000445889 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
ERCC3-203ENST00000445889 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
ERCC3-203ENST00000445889 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
ERCC3-203ENST00000445889 PPP4R2Q9NY27 417 aa19.53■□□□□ 0.72
ERCC3-203ENST00000445889 LRRIQ1Q96JM4 1722 aa19.53■□□□□ 0.72
ERCC3-203ENST00000445889 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
ERCC3-203ENST00000445889 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
ERCC3-203ENST00000445889 CTTNBP2Q8WZ74 1663 aa19.5■□□□□ 0.71
ERCC3-203ENST00000445889 FANCIQ9NVI1 1328 aa19.5■□□□□ 0.71
ERCC3-203ENST00000445889 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
ERCC3-203ENST00000445889 KIF7Q2M1P5 1343 aa19.49■□□□□ 0.71
ERCC3-203ENST00000445889 CUL7Q14999 1698 aa19.47■□□□□ 0.71
ERCC3-203ENST00000445889 CDK13Q14004 1512 aaKnown RBP19.47■□□□□ 0.71
ERCC3-203ENST00000445889 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
ERCC3-203ENST00000445889 SUPT6HQ7KZ85 1726 aaKnown RBP19.45■□□□□ 0.7
ERCC3-203ENST00000445889 UGGT2Q9NYU1 1516 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms