RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
LINC02549-201ENST00000445346 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
LINC02549-201ENST00000445346 PRDM2Q13029 1718 aa14.74□□□□□ -0.05
LINC02549-201ENST00000445346 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
LINC02549-201ENST00000445346 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
LINC02549-201ENST00000445346 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
LINC02549-201ENST00000445346 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
LINC02549-201ENST00000445346 FBLN2P98095 1184 aa14.71□□□□□ -0.05
LINC02549-201ENST00000445346 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
LINC02549-201ENST00000445346 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC02549-201ENST00000445346 DNMBPQ6XZF7 1577 aa14.65□□□□□ -0.06
LINC02549-201ENST00000445346 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
LINC02549-201ENST00000445346 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
LINC02549-201ENST00000445346 CHD1O14646 1710 aa14.57□□□□□ -0.08
LINC02549-201ENST00000445346 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
LINC02549-201ENST00000445346 SOGA1O94964 1423 aa14.57□□□□□ -0.08
LINC02549-201ENST00000445346 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
LINC02549-201ENST00000445346 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
LINC02549-201ENST00000445346 CHMP7Q8WUX9 453 aaPredicted RBP14.54□□□□□ -0.08
LINC02549-201ENST00000445346 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
LINC02549-201ENST00000445346 SNAPC4Q5SXM2 1469 aa14.49□□□□□ -0.09
LINC02549-201ENST00000445346 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
LINC02549-201ENST00000445346 FGD5Q6ZNL6 1462 aa14.47□□□□□ -0.09
LINC02549-201ENST00000445346 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
LINC02549-201ENST00000445346 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
LINC02549-201ENST00000445346 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.09
LINC02549-201ENST00000445346 SYNJ1O43426 1573 aa14.43□□□□□ -0.1
LINC02549-201ENST00000445346 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
LINC02549-201ENST00000445346 MAGI1Q96QZ7 1491 aaPredicted RBP14.43□□□□□ -0.1
LINC02549-201ENST00000445346 WDR97A6NE52 1622 aa14.42□□□□□ -0.1
LINC02549-201ENST00000445346 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
LINC02549-201ENST00000445346 CLASP1Q7Z460 1538 aa14.41□□□□□ -0.1
LINC02549-201ENST00000445346 ZNF692Q9BU19 519 aaPredicted RBP14.4□□□□□ -0.1
LINC02549-201ENST00000445346 CUX1P39880 1505 aa14.4□□□□□ -0.1
LINC02549-201ENST00000445346 SYNJ2O15056 1496 aa14.39□□□□□ -0.11
LINC02549-201ENST00000445346 REM2Q8IYK8 340 aaPredicted RBP14.38□□□□□ -0.11
LINC02549-201ENST00000445346 GAPVD1Q14C86 1478 aa14.36□□□□□ -0.11
LINC02549-201ENST00000445346 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
LINC02549-201ENST00000445346 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
LINC02549-201ENST00000445346 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
LINC02549-201ENST00000445346 ABCA10Q8WWZ4 1543 aa14.28□□□□□ -0.12
LINC02549-201ENST00000445346 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
LINC02549-201ENST00000445346 FKBP8Q14318 412 aa14.24□□□□□ -0.13
LINC02549-201ENST00000445346 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
LINC02549-201ENST00000445346 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
LINC02549-201ENST00000445346 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
LINC02549-201ENST00000445346 PROM2Q8N271 834 aa14.22□□□□□ -0.13
LINC02549-201ENST00000445346 ERCC6L2Q5T890 1561 aa14.18□□□□□ -0.14
LINC02549-201ENST00000445346 FHAD1B1AJZ9 1412 aa14.17□□□□□ -0.14
LINC02549-201ENST00000445346 NUP160Q12769 1436 aa14.17□□□□□ -0.14
LINC02549-201ENST00000445346 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
LINC02549-201ENST00000445346 CEP170Q5SW79 1584 aa14.16□□□□□ -0.14
LINC02549-201ENST00000445346 ADAMTS12P58397 1594 aa14.15□□□□□ -0.14
LINC02549-201ENST00000445346 JPH4Q96JJ6 628 aa14.12□□□□□ -0.15
LINC02549-201ENST00000445346 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
LINC02549-201ENST00000445346 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
LINC02549-201ENST00000445346 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
LINC02549-201ENST00000445346 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
LINC02549-201ENST00000445346 SHROOM2Q13796 1616 aa14.08□□□□□ -0.15
LINC02549-201ENST00000445346 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.15
LINC02549-201ENST00000445346 FAM69CQ0P6D2 419 aa14.06□□□□□ -0.16
LINC02549-201ENST00000445346 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
LINC02549-201ENST00000445346 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
LINC02549-201ENST00000445346 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
LINC02549-201ENST00000445346 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC02549-201ENST00000445346 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
LINC02549-201ENST00000445346 ABCC10Q5T3U5 1492 aa13.98□□□□□ -0.17
LINC02549-201ENST00000445346 POTEHQ6S545 545 aa13.96□□□□□ -0.17
LINC02549-201ENST00000445346 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
LINC02549-201ENST00000445346 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
LINC02549-201ENST00000445346 MAPKBP1O60336 1514 aa13.93□□□□□ -0.18
LINC02549-201ENST00000445346 KIAA0586Q9BVV6 1533 aa13.92□□□□□ -0.18
LINC02549-201ENST00000445346 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
LINC02549-201ENST00000445346 IGF1RP08069 1367 aa13.92□□□□□ -0.18
LINC02549-201ENST00000445346 KIF27Q86VH2 1401 aa13.9□□□□□ -0.18
LINC02549-201ENST00000445346 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.19
LINC02549-201ENST00000445346 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
LINC02549-201ENST00000445346 PTPRGP23470 1445 aa13.88□□□□□ -0.19
LINC02549-201ENST00000445346 KDM6BO15054 1643 aa13.86□□□□□ -0.19
LINC02549-201ENST00000445346 KDM4FA0A1W2PPD8 638 aa13.86□□□□□ -0.19
LINC02549-201ENST00000445346 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
LINC02549-201ENST00000445346 CARMIL2Q6F5E8 1435 aa13.84□□□□□ -0.19
LINC02549-201ENST00000445346 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
LINC02549-201ENST00000445346 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
LINC02549-201ENST00000445346 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.19
LINC02549-201ENST00000445346 CUL7Q14999 1698 aa13.83□□□□□ -0.2
LINC02549-201ENST00000445346 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
LINC02549-201ENST00000445346 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
LINC02549-201ENST00000445346 ASXL2Q76L83 1435 aa13.78□□□□□ -0.2
LINC02549-201ENST00000445346 ABCC2Q92887 1545 aa13.78□□□□□ -0.2
LINC02549-201ENST00000445346 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.21
LINC02549-201ENST00000445346 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
LINC02549-201ENST00000445346 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
LINC02549-201ENST00000445346 UACAQ9BZF9 1416 aa13.74□□□□□ -0.21
LINC02549-201ENST00000445346 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
LINC02549-201ENST00000445346 UHRF1BP1LA0JNW5 1464 aa13.72□□□□□ -0.21
LINC02549-201ENST00000445346 GLI2P10070 1586 aa13.71□□□□□ -0.22
LINC02549-201ENST00000445346 EVX2Q03828 476 aa13.69□□□□□ -0.22
LINC02549-201ENST00000445346 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
LINC02549-201ENST00000445346 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms