RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 ARHGEF11O15085 1522 aa9.67□□□□□ -0.86
CBX1-204ENST00000444685 POTEMA6NI47 508 aa9.66□□□□□ -0.86
CBX1-204ENST00000444685 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
CBX1-204ENST00000444685 ZNF608Q9ULD9 1512 aaPredicted RBP9.61□□□□□ -0.87
CBX1-204ENST00000444685 ABCC8Q09428 1581 aa9.6□□□□□ -0.87
CBX1-204ENST00000444685 PITPNM1O00562 1244 aa9.59□□□□□ -0.87
CBX1-204ENST00000444685 POTEGQ6S5H5 508 aa9.58□□□□□ -0.88
CBX1-204ENST00000444685 RSF1Q96T23 1441 aaPredicted RBP9.57□□□□□ -0.88
CBX1-204ENST00000444685 CHMP7Q8WUX9 453 aaPredicted RBP9.57□□□□□ -0.88
CBX1-204ENST00000444685 TOP2AP11388 1531 aaKnown RBP9.56□□□□□ -0.88
CBX1-204ENST00000444685 AQRO60306 1485 aaKnown RBP eCLIP9.56□□□□□ -0.884e-6■■■□□ 16.4
CBX1-204ENST00000444685 TOPBP1Q92547 1522 aa9.56□□□□□ -0.88
CBX1-204ENST00000444685 ZBTB22O15209 634 aa9.55□□□□□ -0.88
CBX1-204ENST00000444685 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
CBX1-204ENST00000444685 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
CBX1-204ENST00000444685 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
CBX1-204ENST00000444685 CCDC88BA6NC98 1476 aa9.51□□□□□ -0.89
CBX1-204ENST00000444685 PRDM2Q13029 1718 aa9.51□□□□□ -0.89
CBX1-204ENST00000444685 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
CBX1-204ENST00000444685 CHD1O14646 1710 aa9.49□□□□□ -0.89
CBX1-204ENST00000444685 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
CBX1-204ENST00000444685 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
CBX1-204ENST00000444685 SOGA1O94964 1423 aa9.48□□□□□ -0.89
CBX1-204ENST00000444685 POLA2Q14181 598 aa9.48□□□□□ -0.89
CBX1-204ENST00000444685 DNMBPQ6XZF7 1577 aa9.48□□□□□ -0.89
CBX1-204ENST00000444685 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
CBX1-204ENST00000444685 POLA1P09884 1462 aaPredicted RBP9.43□□□□□ -0.9
CBX1-204ENST00000444685 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
CBX1-204ENST00000444685 RAD54L2Q9Y4B4 1467 aa9.42□□□□□ -0.9
CBX1-204ENST00000444685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.41□□□□□ -0.9
CBX1-204ENST00000444685 HNRNPUL2Q1KMD3 747 aaKnown RBP9.41□□□□□ -0.9
CBX1-204ENST00000444685 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
CBX1-204ENST00000444685 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.91
CBX1-204ENST00000444685 GRIN2BQ13224 1484 aa9.39□□□□□ -0.91
CBX1-204ENST00000444685 GAPVD1Q14C86 1478 aa9.39□□□□□ -0.91
CBX1-204ENST00000444685 OTUD5Q96G74 571 aa9.38□□□□□ -0.91
CBX1-204ENST00000444685 SYNJ2O15056 1496 aa9.38□□□□□ -0.91
CBX1-204ENST00000444685 CLASP1Q7Z460 1538 aa9.37□□□□□ -0.91
CBX1-204ENST00000444685 SLC4A2P04920 1241 aa9.37□□□□□ -0.91
CBX1-204ENST00000444685 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
CBX1-204ENST00000444685 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
CBX1-204ENST00000444685 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
CBX1-204ENST00000444685 PRKAR2AP13861 404 aaKnown RBP9.33□□□□□ -0.92
CBX1-204ENST00000444685 FOXD4L1Q9NU39 408 aa9.33□□□□□ -0.92
CBX1-204ENST00000444685 SAMD1Q6SPF0 538 aaPredicted RBP9.31□□□□□ -0.92
CBX1-204ENST00000444685 FAM69CQ0P6D2 419 aa9.3□□□□□ -0.92
CBX1-204ENST00000444685 ILDR1Q86SU0 546 aaPredicted RBP9.26□□□□□ -0.93
CBX1-204ENST00000444685 CUX1P39880 1505 aa9.26□□□□□ -0.93
CBX1-204ENST00000444685 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
CBX1-204ENST00000444685 GRIN2AQ12879 1464 aa9.23□□□□□ -0.93
CBX1-204ENST00000444685 PBRM1Q86U86 1689 aa9.23□□□□□ -0.93
CBX1-204ENST00000444685 ABCA10Q8WWZ4 1543 aa9.22□□□□□ -0.93
CBX1-204ENST00000444685 WRNQ14191 1432 aaPredicted RBP eCLIP9.22□□□□□ -0.93
CBX1-204ENST00000444685 KDM4FA0A1W2PPD8 638 aa9.21□□□□□ -0.94
CBX1-204ENST00000444685 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.94
CBX1-204ENST00000444685 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
CBX1-204ENST00000444685 FHAD1B1AJZ9 1412 aa9.2□□□□□ -0.94
CBX1-204ENST00000444685 ERCC6L2Q5T890 1561 aa9.2□□□□□ -0.94
CBX1-204ENST00000444685 POTEB2H3BUK9 544 aa9.19□□□□□ -0.94
CBX1-204ENST00000444685 NUP160Q12769 1436 aa9.19□□□□□ -0.94
CBX1-204ENST00000444685 ABCC10Q5T3U5 1492 aa9.17□□□□□ -0.94
CBX1-204ENST00000444685 ABCA5Q8WWZ7 1642 aa9.16□□□□□ -0.94
CBX1-204ENST00000444685 KIF13AQ9H1H9 1805 aa9.16□□□□□ -0.94
CBX1-204ENST00000444685 SHROOM2Q13796 1616 aa9.13□□□□□ -0.95
CBX1-204ENST00000444685 DCBLD2Q96PD2 775 aa9.13□□□□□ -0.95
CBX1-204ENST00000444685 ADAMTS12P58397 1594 aa9.12□□□□□ -0.95
CBX1-204ENST00000444685 TTBK1Q5TCY1 1321 aaPredicted RBP9.12□□□□□ -0.95
CBX1-204ENST00000444685 KDM6BO15054 1643 aa9.12□□□□□ -0.95
CBX1-204ENST00000444685 SUPT5HO00267 1087 aaKnown RBP9.11□□□□□ -0.95
CBX1-204ENST00000444685 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
CBX1-204ENST00000444685 MAPKBP1O60336 1514 aa9.1□□□□□ -0.95
CBX1-204ENST00000444685 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
CBX1-204ENST00000444685 TSPOAP1O95153 1857 aa9.08□□□□□ -0.96
CBX1-204ENST00000444685 ZBTB12Q9Y330 459 aaPredicted RBP9.08□□□□□ -0.96
CBX1-204ENST00000444685 PTPRGP23470 1445 aa9.07□□□□□ -0.96
CBX1-204ENST00000444685 DIP2BQ9P265 1576 aa9.06□□□□□ -0.96
CBX1-204ENST00000444685 TOP2BQ02880 1626 aa9.05□□□□□ -0.96
CBX1-204ENST00000444685 KIAA0586Q9BVV6 1533 aa9.03□□□□□ -0.96
CBX1-204ENST00000444685 CARMIL2Q6F5E8 1435 aa9.03□□□□□ -0.96
CBX1-204ENST00000444685 PLB1Q6P1J6 1458 aa9.02□□□□□ -0.96
CBX1-204ENST00000444685 ADCY10Q96PN6 1610 aa9.02□□□□□ -0.96
CBX1-204ENST00000444685 CLCN6P51797 869 aa9.02□□□□□ -0.97
CBX1-204ENST00000444685 ADGRL1O94910 1474 aa9.02□□□□□ -0.97
CBX1-204ENST00000444685 FBXO41Q8TF61 875 aa9.01□□□□□ -0.97
CBX1-204ENST00000444685 FAM163AQ96GL9 167 aaPredicted RBP9.01□□□□□ -0.97
CBX1-204ENST00000444685 CLEC11AQ9Y240 323 aa9.01□□□□□ -0.97
CBX1-204ENST00000444685 TNIKQ9UKE5 1360 aa9□□□□□ -0.97
CBX1-204ENST00000444685 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
CBX1-204ENST00000444685 ASXL2Q76L83 1435 aa8.99□□□□□ -0.97
CBX1-204ENST00000444685 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
CBX1-204ENST00000444685 FAM9AQ8IZU1 332 aaPredicted RBP8.99□□□□□ -0.97
CBX1-204ENST00000444685 RUSC2Q8N2Y8 1516 aa8.99□□□□□ -0.97
CBX1-204ENST00000444685 IGF1RP08069 1367 aa8.99□□□□□ -0.97
CBX1-204ENST00000444685 ABCC2Q92887 1545 aa8.98□□□□□ -0.97
CBX1-204ENST00000444685 TEX14Q8IWB6 1497 aa8.97□□□□□ -0.97
CBX1-204ENST00000444685 KIF27Q86VH2 1401 aa8.97□□□□□ -0.97
CBX1-204ENST00000444685 HECW2Q9P2P5 1572 aa8.96□□□□□ -0.97
CBX1-204ENST00000444685 MYCNP04198 464 aaPredicted RBP8.95□□□□□ -0.98
CBX1-204ENST00000444685 GLI2P10070 1586 aa8.95□□□□□ -0.98
CBX1-204ENST00000444685 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms