RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
CBX1-204ENST00000444685 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
CBX1-204ENST00000444685 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
CBX1-204ENST00000444685 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
CBX1-204ENST00000444685 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
CBX1-204ENST00000444685 FOXD1Q16676 465 aa14.57□□□□□ -0.08
CBX1-204ENST00000444685 MSH5O43196 834 aa14.05□□□□□ -0.16
CBX1-204ENST00000444685 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
CBX1-204ENST00000444685 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
CBX1-204ENST00000444685 NISCHQ9Y2I1 1504 aa12.8□□□□□ -0.36
CBX1-204ENST00000444685 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
CBX1-204ENST00000444685 ADRA2BP18089 450 aa12.56□□□□□ -0.4
CBX1-204ENST00000444685 POTEHQ6S545 545 aa12.23□□□□□ -0.45
CBX1-204ENST00000444685 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
CBX1-204ENST00000444685 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
CBX1-204ENST00000444685 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
CBX1-204ENST00000444685 ABCC9O60706 1549 aa11.91□□□□□ -0.5
CBX1-204ENST00000444685 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
CBX1-204ENST00000444685 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
CBX1-204ENST00000444685 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
CBX1-204ENST00000444685 CCDC180Q9P1Z9 1646 aa11.55□□□□□ -0.56
CBX1-204ENST00000444685 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
CBX1-204ENST00000444685 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.58
CBX1-204ENST00000444685 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.61
CBX1-204ENST00000444685 DCAF8L2P0C7V8 631 aa11.19□□□□□ -0.62
CBX1-204ENST00000444685 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
CBX1-204ENST00000444685 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
CBX1-204ENST00000444685 NACADO15069 1562 aa11.07□□□□□ -0.64
CBX1-204ENST00000444685 SP7Q8TDD2 431 aaPredicted RBP10.85□□□□□ -0.67
CBX1-204ENST00000444685 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
CBX1-204ENST00000444685 BICRAQ9NZM4 1560 aa10.79□□□□□ -0.68
CBX1-204ENST00000444685 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
CBX1-204ENST00000444685 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
CBX1-204ENST00000444685 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
CBX1-204ENST00000444685 DSG3P32926 999 aa10.74□□□□□ -0.69
CBX1-204ENST00000444685 CC2D2AQ9P2K1 1620 aa10.7□□□□□ -0.7
CBX1-204ENST00000444685 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
CBX1-204ENST00000444685 RNF216Q9NWF9 866 aaPredicted RBP10.66□□□□□ -0.7
CBX1-204ENST00000444685 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
CBX1-204ENST00000444685 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
CBX1-204ENST00000444685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.721e-7■■□□□ 14.1
CBX1-204ENST00000444685 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
CBX1-204ENST00000444685 SCRIBQ14160 1630 aa10.54□□□□□ -0.72
CBX1-204ENST00000444685 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
CBX1-204ENST00000444685 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
CBX1-204ENST00000444685 CAPN15O75808 1086 aa10.49□□□□□ -0.73
CBX1-204ENST00000444685 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
CBX1-204ENST00000444685 CNKSR2Q8WXI2 1034 aa10.43□□□□□ -0.74
CBX1-204ENST00000444685 CUX2O14529 1486 aa10.38□□□□□ -0.75
CBX1-204ENST00000444685 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
CBX1-204ENST00000444685 KCNA4P22459 653 aa10.37□□□□□ -0.75
CBX1-204ENST00000444685 PPP4R3CPQ6ZMV5 832 aa10.36□□□□□ -0.75
CBX1-204ENST00000444685 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
CBX1-204ENST00000444685 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
CBX1-204ENST00000444685 U3KPZ7 1027 aaPredicted RBP10.22□□□□□ -0.77
CBX1-204ENST00000444685 HAX1O00165 279 aa10.21□□□□□ -0.77
CBX1-204ENST00000444685 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
CBX1-204ENST00000444685 LHX8Q68G74 356 aa10.19□□□□□ -0.78
CBX1-204ENST00000444685 EHMT2Q96KQ7 1210 aa10.19□□□□□ -0.78
CBX1-204ENST00000444685 ABCB7O75027 752 aa10.15□□□□□ -0.78
CBX1-204ENST00000444685 ATAD2BQ9ULI0 1458 aa10.14□□□□□ -0.79
CBX1-204ENST00000444685 SMARCA2P51531 1590 aa10.12□□□□□ -0.79
CBX1-204ENST00000444685 NESP48681 1621 aa10.11□□□□□ -0.79
CBX1-204ENST00000444685 HMGXB3Q12766 1538 aa10.07□□□□□ -0.8
CBX1-204ENST00000444685 PDS5BQ9NTI5 1447 aa10.07□□□□□ -0.8
CBX1-204ENST00000444685 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
CBX1-204ENST00000444685 EVX2Q03828 476 aa10.04□□□□□ -0.8
CBX1-204ENST00000444685 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
CBX1-204ENST00000444685 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
CBX1-204ENST00000444685 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
CBX1-204ENST00000444685 OSCARQ8IYS5 282 aa10.02□□□□□ -0.81
CBX1-204ENST00000444685 SMARCA4P51532 1647 aa10.01□□□□□ -0.81
CBX1-204ENST00000444685 THOC2Q8NI27 1593 aaKnown RBP9.99□□□□□ -0.81
CBX1-204ENST00000444685 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
CBX1-204ENST00000444685 CADPSQ9ULU8 1353 aa9.95□□□□□ -0.82
CBX1-204ENST00000444685 KIF21AQ7Z4S6 1674 aa9.93□□□□□ -0.82
CBX1-204ENST00000444685 SLC4A1APQ9BWU0 796 aaKnown RBP9.92□□□□□ -0.82
CBX1-204ENST00000444685 MRC2Q9UBG0 1479 aa9.91□□□□□ -0.82
CBX1-204ENST00000444685 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.82
CBX1-204ENST00000444685 ZNF219Q9P2Y4 722 aaPredicted RBP9.89□□□□□ -0.83
CBX1-204ENST00000444685 NCBP3Q53F19 620 aaKnown RBP9.87□□□□□ -0.83
CBX1-204ENST00000444685 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
CBX1-204ENST00000444685 WDR62O43379 1518 aa9.85□□□□□ -0.83
CBX1-204ENST00000444685 CEP164Q9UPV0 1460 aa9.84□□□□□ -0.83
CBX1-204ENST00000444685 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
CBX1-204ENST00000444685 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
CBX1-204ENST00000444685 CYB5RLQ6IPT4 315 aa9.79□□□□□ -0.84
CBX1-204ENST00000444685 NPM3O75607 178 aaKnown RBP9.77□□□□□ -0.85
CBX1-204ENST00000444685 FXR2P51116 673 aaKnown RBP eCLIP9.77□□□□□ -0.85
CBX1-204ENST00000444685 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
CBX1-204ENST00000444685 CFTRP13569 1480 aa9.72□□□□□ -0.85
CBX1-204ENST00000444685 RIMBP3CA6NJZ7 1639 aa9.71□□□□□ -0.85
CBX1-204ENST00000444685 RIMBP3BA6NNM3 1639 aa9.71□□□□□ -0.85
CBX1-204ENST00000444685 RIMBP3Q9UFD9 1639 aa9.71□□□□□ -0.85
CBX1-204ENST00000444685 FBLN2P98095 1184 aa9.71□□□□□ -0.86
CBX1-204ENST00000444685 GABBR2O75899 941 aa9.7□□□□□ -0.86
CBX1-204ENST00000444685 WIZO95785 1651 aa9.7□□□□□ -0.86
CBX1-204ENST00000444685 APLP2Q06481 763 aa9.69□□□□□ -0.86
CBX1-204ENST00000444685 URB2Q14146 1524 aaKnown RBP9.68□□□□□ -0.86
CBX1-204ENST00000444685 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms