RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
SLC48A1-201ENST00000442218 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
SLC48A1-201ENST00000442218 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
SLC48A1-201ENST00000442218 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
SLC48A1-201ENST00000442218 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
SLC48A1-201ENST00000442218 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
SLC48A1-201ENST00000442218 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
SLC48A1-201ENST00000442218 DHX57Q6P158 1386 aaKnown RBP19.16■□□□□ 0.66
SLC48A1-201ENST00000442218 HIRIP3Q9BW71 556 aaPredicted RBP19.14■□□□□ 0.66
SLC48A1-201ENST00000442218 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
SLC48A1-201ENST00000442218 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
SLC48A1-201ENST00000442218 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
SLC48A1-201ENST00000442218 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
SLC48A1-201ENST00000442218 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
SLC48A1-201ENST00000442218 FAM50AQ14320 339 aaKnown RBP19.07■□□□□ 0.64
SLC48A1-201ENST00000442218 BCANQ96GW7 911 aa19.06■□□□□ 0.64
SLC48A1-201ENST00000442218 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.64
SLC48A1-201ENST00000442218 WDR62O43379 1518 aa19.06■□□□□ 0.64
SLC48A1-201ENST00000442218 CUL7Q14999 1698 aa19.05■□□□□ 0.64
SLC48A1-201ENST00000442218 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
SLC48A1-201ENST00000442218 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
SLC48A1-201ENST00000442218 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
SLC48A1-201ENST00000442218 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
SLC48A1-201ENST00000442218 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
SLC48A1-201ENST00000442218 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
SLC48A1-201ENST00000442218 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
SLC48A1-201ENST00000442218 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
SLC48A1-201ENST00000442218 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
SLC48A1-201ENST00000442218 FHOD3Q2V2M9 1422 aa18.92■□□□□ 0.62
SLC48A1-201ENST00000442218 RAB3GAP2Q9H2M9 1393 aa18.92■□□□□ 0.62
SLC48A1-201ENST00000442218 CTTNBP2Q8WZ74 1663 aa18.91■□□□□ 0.62
SLC48A1-201ENST00000442218 PHLDB1Q86UU1 1377 aa18.9■□□□□ 0.62
SLC48A1-201ENST00000442218 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
SLC48A1-201ENST00000442218 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
SLC48A1-201ENST00000442218 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
SLC48A1-201ENST00000442218 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
SLC48A1-201ENST00000442218 RRBP1Q9P2E9 1410 aaKnown RBP18.84■□□□□ 0.61
SLC48A1-201ENST00000442218 TRIM52Q96A61 297 aa18.83■□□□□ 0.61
SLC48A1-201ENST00000442218 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
SLC48A1-201ENST00000442218 CLSPNQ9HAW4 1339 aa18.81■□□□□ 0.6
SLC48A1-201ENST00000442218 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
SLC48A1-201ENST00000442218 FKBP8Q14318 412 aa18.76■□□□□ 0.59
SLC48A1-201ENST00000442218 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
SLC48A1-201ENST00000442218 LRRC9Q6ZRR7 1453 aa18.74■□□□□ 0.59
SLC48A1-201ENST00000442218 SAMD9Q5K651 1589 aa18.73■□□□□ 0.59
SLC48A1-201ENST00000442218 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
SLC48A1-201ENST00000442218 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
SLC48A1-201ENST00000442218 FBLN2P98095 1184 aa18.72■□□□□ 0.59
SLC48A1-201ENST00000442218 CHIC2Q9UKJ5 165 aa18.71■□□□□ 0.59
SLC48A1-201ENST00000442218 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
SLC48A1-201ENST00000442218 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
SLC48A1-201ENST00000442218 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
SLC48A1-201ENST00000442218 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
SLC48A1-201ENST00000442218 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
SLC48A1-201ENST00000442218 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
SLC48A1-201ENST00000442218 CASKIN1Q8WXD9 1431 aa18.68■□□□□ 0.58
SLC48A1-201ENST00000442218 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
SLC48A1-201ENST00000442218 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
SLC48A1-201ENST00000442218 MAP3K1Q13233 1512 aa18.65■□□□□ 0.58
SLC48A1-201ENST00000442218 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
SLC48A1-201ENST00000442218 SYNJ2O15056 1496 aa18.64■□□□□ 0.58
SLC48A1-201ENST00000442218 IRX6P78412 446 aaPredicted RBP18.63■□□□□ 0.57
SLC48A1-201ENST00000442218 KIAA0586Q9BVV6 1533 aa18.62■□□□□ 0.57
SLC48A1-201ENST00000442218 RRP7BPQ9NSQ0 103 aa18.62■□□□□ 0.57
SLC48A1-201ENST00000442218 CFAP43Q8NDM7 1665 aa18.61■□□□□ 0.57
SLC48A1-201ENST00000442218 MTUS2Q5JR59 1369 aa18.6■□□□□ 0.57
SLC48A1-201ENST00000442218 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
SLC48A1-201ENST00000442218 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
SLC48A1-201ENST00000442218 LRRIQ1Q96JM4 1722 aa18.58■□□□□ 0.56
SLC48A1-201ENST00000442218 PTPRKQ15262 1439 aa18.57■□□□□ 0.56
SLC48A1-201ENST00000442218 ANP32CO43423 234 aa18.56■□□□□ 0.56
SLC48A1-201ENST00000442218 PPP1R15AO75807 674 aaPredicted RBP18.56■□□□□ 0.56
SLC48A1-201ENST00000442218 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
SLC48A1-201ENST00000442218 FOXD1Q16676 465 aa18.55■□□□□ 0.56
SLC48A1-201ENST00000442218 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
SLC48A1-201ENST00000442218 TONSLQ96HA7 1378 aa18.52■□□□□ 0.56
SLC48A1-201ENST00000442218 NUP160Q12769 1436 aa18.52■□□□□ 0.56
SLC48A1-201ENST00000442218 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
SLC48A1-201ENST00000442218 NEFLP07196 543 aa18.5■□□□□ 0.55
SLC48A1-201ENST00000442218 JPH4Q96JJ6 628 aa18.49■□□□□ 0.55
SLC48A1-201ENST00000442218 MYT1Q01538 1121 aa18.48■□□□□ 0.55
SLC48A1-201ENST00000442218 FGD6Q6ZV73 1430 aa18.47■□□□□ 0.55
SLC48A1-201ENST00000442218 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
SLC48A1-201ENST00000442218 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
SLC48A1-201ENST00000442218 MAGI3Q5TCQ9 1506 aa18.44■□□□□ 0.54
SLC48A1-201ENST00000442218 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
SLC48A1-201ENST00000442218 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
SLC48A1-201ENST00000442218 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
SLC48A1-201ENST00000442218 CHD1O14646 1710 aa18.42■□□□□ 0.54
SLC48A1-201ENST00000442218 NCOA2Q15596 1464 aa18.41■□□□□ 0.54
SLC48A1-201ENST00000442218 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
SLC48A1-201ENST00000442218 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
SLC48A1-201ENST00000442218 POLR3GLQ9BT43 218 aa18.38■□□□□ 0.53
SLC48A1-201ENST00000442218 PLB1Q6P1J6 1458 aa18.37■□□□□ 0.53
SLC48A1-201ENST00000442218 CARMIL2Q6F5E8 1435 aa18.37■□□□□ 0.53
SLC48A1-201ENST00000442218 NUP153P49790 1475 aaKnown RBP18.37■□□□□ 0.53
SLC48A1-201ENST00000442218 EHBP1L1Q8N3D4 1523 aa18.37■□□□□ 0.53
SLC48A1-201ENST00000442218 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
SLC48A1-201ENST00000442218 RAPGEF6Q8TEU7 1601 aa18.36■□□□□ 0.53
SLC48A1-201ENST00000442218 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms