RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
HDAC9-215ENST00000441986 CHD1O14646 1710 aa11.29□□□□□ -0.6
HDAC9-215ENST00000441986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDAC9-215ENST00000441986 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
HDAC9-215ENST00000441986 GRIN2BQ13224 1484 aa11.23□□□□□ -0.61
HDAC9-215ENST00000441986 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-215ENST00000441986 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
HDAC9-215ENST00000441986 SYNJ1O43426 1573 aa11.22□□□□□ -0.61
HDAC9-215ENST00000441986 FGD5Q6ZNL6 1462 aa11.22□□□□□ -0.61
HDAC9-215ENST00000441986 CLASP1Q7Z460 1538 aa11.2□□□□□ -0.62
HDAC9-215ENST00000441986 SYNJ2O15056 1496 aa11.2□□□□□ -0.62
HDAC9-215ENST00000441986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-215ENST00000441986 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
HDAC9-215ENST00000441986 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
HDAC9-215ENST00000441986 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
HDAC9-215ENST00000441986 CUX1P39880 1505 aa11.15□□□□□ -0.62
HDAC9-215ENST00000441986 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-215ENST00000441986 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
HDAC9-215ENST00000441986 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-215ENST00000441986 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
HDAC9-215ENST00000441986 WRNQ14191 1432 aaPredicted RBP eCLIP11.07□□□□□ -0.64
HDAC9-215ENST00000441986 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
HDAC9-215ENST00000441986 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
HDAC9-215ENST00000441986 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
HDAC9-215ENST00000441986 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
HDAC9-215ENST00000441986 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.64
HDAC9-215ENST00000441986 NUP160Q12769 1436 aa11.02□□□□□ -0.64
HDAC9-215ENST00000441986 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.65
HDAC9-215ENST00000441986 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
HDAC9-215ENST00000441986 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
HDAC9-215ENST00000441986 ERCC6L2Q5T890 1561 aa11.01□□□□□ -0.65
HDAC9-215ENST00000441986 FAM69CQ0P6D2 419 aa11□□□□□ -0.65
HDAC9-215ENST00000441986 PRG4Q92954 1404 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-215ENST00000441986 APLP2Q06481 763 aa10.97□□□□□ -0.65
HDAC9-215ENST00000441986 ADAMTS12P58397 1594 aa10.95□□□□□ -0.66
HDAC9-215ENST00000441986 ERICH3Q5RHP9 1530 aa10.95□□□□□ -0.66
HDAC9-215ENST00000441986 SHROOM2Q13796 1616 aa10.95□□□□□ -0.66
HDAC9-215ENST00000441986 TOP2BQ02880 1626 aa10.92□□□□□ -0.66
HDAC9-215ENST00000441986 ABCC10Q5T3U5 1492 aa10.92□□□□□ -0.66
HDAC9-215ENST00000441986 FKBP8Q14318 412 aa10.91□□□□□ -0.66
HDAC9-215ENST00000441986 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
HDAC9-215ENST00000441986 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
HDAC9-215ENST00000441986 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
HDAC9-215ENST00000441986 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-215ENST00000441986 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
HDAC9-215ENST00000441986 MAPKBP1O60336 1514 aa10.85□□□□□ -0.67
HDAC9-215ENST00000441986 KIAA0586Q9BVV6 1533 aa10.84□□□□□ -0.67
HDAC9-215ENST00000441986 IGF1RP08069 1367 aa10.83□□□□□ -0.68
HDAC9-215ENST00000441986 PTPRGP23470 1445 aa10.82□□□□□ -0.68
HDAC9-215ENST00000441986 TTBK1Q5TCY1 1321 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-215ENST00000441986 DIP2BQ9P265 1576 aa10.8□□□□□ -0.68
HDAC9-215ENST00000441986 KDM6BO15054 1643 aa10.8□□□□□ -0.68
HDAC9-215ENST00000441986 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
HDAC9-215ENST00000441986 KIF27Q86VH2 1401 aa10.79□□□□□ -0.68
HDAC9-215ENST00000441986 ADCY10Q96PN6 1610 aa10.79□□□□□ -0.68
HDAC9-215ENST00000441986 CARMIL2Q6F5E8 1435 aa10.78□□□□□ -0.68
HDAC9-215ENST00000441986 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-215ENST00000441986 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.69
HDAC9-215ENST00000441986 CARMIL1Q5VZK9 1371 aa10.76□□□□□ -0.69
HDAC9-215ENST00000441986 PLB1Q6P1J6 1458 aa10.74□□□□□ -0.69
HDAC9-215ENST00000441986 ASXL2Q76L83 1435 aa10.73□□□□□ -0.69
HDAC9-215ENST00000441986 ABCC2Q92887 1545 aa10.73□□□□□ -0.69
HDAC9-215ENST00000441986 TSPOAP1O95153 1857 aa10.72□□□□□ -0.69
HDAC9-215ENST00000441986 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-215ENST00000441986 CUL7Q14999 1698 aa10.71□□□□□ -0.69
HDAC9-215ENST00000441986 UACAQ9BZF9 1416 aa10.7□□□□□ -0.7
HDAC9-215ENST00000441986 UHRF1BP1LA0JNW5 1464 aa10.69□□□□□ -0.7
HDAC9-215ENST00000441986 GLI2P10070 1586 aa10.69□□□□□ -0.7
HDAC9-215ENST00000441986 ADGRL1O94910 1474 aa10.66□□□□□ -0.7
HDAC9-215ENST00000441986 TEX14Q8IWB6 1497 aa10.66□□□□□ -0.7
HDAC9-215ENST00000441986 CAPN15O75808 1086 aa10.65□□□□□ -0.7
HDAC9-215ENST00000441986 FAM9AQ8IZU1 332 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-215ENST00000441986 EPRSP07814 1512 aaKnown RBP10.64□□□□□ -0.71
HDAC9-215ENST00000441986 COL17A1Q9UMD9 1497 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-215ENST00000441986 IQGAP2Q13576 1575 aa10.64□□□□□ -0.71
HDAC9-215ENST00000441986 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
HDAC9-215ENST00000441986 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-215ENST00000441986 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-215ENST00000441986 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
HDAC9-215ENST00000441986 DISP1Q96F81 1524 aa10.62□□□□□ -0.71
HDAC9-215ENST00000441986 POLA2Q14181 598 aa10.61□□□□□ -0.71
HDAC9-215ENST00000441986 RAPGEF2Q9Y4G8 1499 aa10.6□□□□□ -0.71
HDAC9-215ENST00000441986 PPRC1Q5VV67 1664 aaKnown RBP10.6□□□□□ -0.71
HDAC9-215ENST00000441986 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
HDAC9-215ENST00000441986 CD109Q6YHK3 1445 aa10.58□□□□□ -0.72
HDAC9-215ENST00000441986 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
HDAC9-215ENST00000441986 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
HDAC9-215ENST00000441986 WDR7Q9Y4E6 1490 aa10.56□□□□□ -0.72
HDAC9-215ENST00000441986 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
HDAC9-215ENST00000441986 HECW2Q9P2P5 1572 aa10.55□□□□□ -0.72
HDAC9-215ENST00000441986 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
HDAC9-215ENST00000441986 MAGI3Q5TCQ9 1506 aa10.54□□□□□ -0.72
HDAC9-215ENST00000441986 FBXO41Q8TF61 875 aa10.54□□□□□ -0.72
HDAC9-215ENST00000441986 GOLGA3Q08378 1498 aa10.53□□□□□ -0.72
HDAC9-215ENST00000441986 KIAA0556O60303 1618 aa10.52□□□□□ -0.73
HDAC9-215ENST00000441986 POTEHQ6S545 545 aa10.51□□□□□ -0.73
HDAC9-215ENST00000441986 ZBTB12Q9Y330 459 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-215ENST00000441986 PHLDB1Q86UU1 1377 aa10.51□□□□□ -0.73
HDAC9-215ENST00000441986 PROM2Q8N271 834 aa10.5□□□□□ -0.73
HDAC9-215ENST00000441986 ARAP3Q8WWN8 1544 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms