RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
HDAC9-215ENST00000441986 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
HDAC9-215ENST00000441986 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
HDAC9-215ENST00000441986 NISCHQ9Y2I1 1504 aa15.44■□□□□ 0.06
HDAC9-215ENST00000441986 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
HDAC9-215ENST00000441986 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
HDAC9-215ENST00000441986 ABCC9O60706 1549 aa14.15□□□□□ -0.14
HDAC9-215ENST00000441986 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
HDAC9-215ENST00000441986 FOXD1Q16676 465 aa13.79□□□□□ -0.2
HDAC9-215ENST00000441986 ADRA2BP18089 450 aa13.55□□□□□ -0.24
HDAC9-215ENST00000441986 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
HDAC9-215ENST00000441986 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
HDAC9-215ENST00000441986 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
HDAC9-215ENST00000441986 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
HDAC9-215ENST00000441986 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
HDAC9-215ENST00000441986 NACADO15069 1562 aa13.24□□□□□ -0.29
HDAC9-215ENST00000441986 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC9-215ENST00000441986 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
HDAC9-215ENST00000441986 MSH5O43196 834 aa13□□□□□ -0.33
HDAC9-215ENST00000441986 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
HDAC9-215ENST00000441986 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
HDAC9-215ENST00000441986 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
HDAC9-215ENST00000441986 KCNA4P22459 653 aa12.9□□□□□ -0.34
HDAC9-215ENST00000441986 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
HDAC9-215ENST00000441986 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
HDAC9-215ENST00000441986 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
HDAC9-215ENST00000441986 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
HDAC9-215ENST00000441986 DCAF1Q9Y4B6 1507 aa12.73□□□□□ -0.37
HDAC9-215ENST00000441986 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.38
HDAC9-215ENST00000441986 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
HDAC9-215ENST00000441986 SCRIBQ14160 1630 aa12.63□□□□□ -0.39
HDAC9-215ENST00000441986 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
HDAC9-215ENST00000441986 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
HDAC9-215ENST00000441986 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
HDAC9-215ENST00000441986 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
HDAC9-215ENST00000441986 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
HDAC9-215ENST00000441986 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
HDAC9-215ENST00000441986 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
HDAC9-215ENST00000441986 CUX2O14529 1486 aa12.29□□□□□ -0.44
HDAC9-215ENST00000441986 NCAPD3P42695 1498 aa12.26□□□□□ -0.45
HDAC9-215ENST00000441986 ERCC6Q03468 1493 aa12.26□□□□□ -0.45
HDAC9-215ENST00000441986 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
HDAC9-215ENST00000441986 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
HDAC9-215ENST00000441986 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
HDAC9-215ENST00000441986 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
HDAC9-215ENST00000441986 HMGXB3Q12766 1538 aa12.07□□□□□ -0.48
HDAC9-215ENST00000441986 NESP48681 1621 aa12.07□□□□□ -0.48
HDAC9-215ENST00000441986 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
HDAC9-215ENST00000441986 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
HDAC9-215ENST00000441986 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-215ENST00000441986 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
HDAC9-215ENST00000441986 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
HDAC9-215ENST00000441986 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
HDAC9-215ENST00000441986 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
HDAC9-215ENST00000441986 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
HDAC9-215ENST00000441986 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
HDAC9-215ENST00000441986 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
HDAC9-215ENST00000441986 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
HDAC9-215ENST00000441986 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
HDAC9-215ENST00000441986 ZBTB22O15209 634 aa11.88□□□□□ -0.51
HDAC9-215ENST00000441986 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
HDAC9-215ENST00000441986 OSCARQ8IYS5 282 aa11.83□□□□□ -0.52
HDAC9-215ENST00000441986 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
HDAC9-215ENST00000441986 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
HDAC9-215ENST00000441986 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
HDAC9-215ENST00000441986 WDR62O43379 1518 aa11.76□□□□□ -0.53
HDAC9-215ENST00000441986 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
HDAC9-215ENST00000441986 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.53
HDAC9-215ENST00000441986 WIZO95785 1651 aa11.69□□□□□ -0.54
HDAC9-215ENST00000441986 CFTRP13569 1480 aa11.68□□□□□ -0.54
HDAC9-215ENST00000441986 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
HDAC9-215ENST00000441986 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
HDAC9-215ENST00000441986 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
HDAC9-215ENST00000441986 CYB5RLQ6IPT4 315 aa11.54□□□□□ -0.56
HDAC9-215ENST00000441986 TOP2AP11388 1531 aaKnown RBP11.54□□□□□ -0.56
HDAC9-215ENST00000441986 IFT140Q96RY7 1462 aa11.53□□□□□ -0.56
HDAC9-215ENST00000441986 RIMBP3CA6NJZ7 1639 aa11.5□□□□□ -0.57
HDAC9-215ENST00000441986 RIMBP3BA6NNM3 1639 aa11.5□□□□□ -0.57
HDAC9-215ENST00000441986 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
HDAC9-215ENST00000441986 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-215ENST00000441986 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-215ENST00000441986 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
HDAC9-215ENST00000441986 ARHGEF11O15085 1522 aa11.47□□□□□ -0.57
HDAC9-215ENST00000441986 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
HDAC9-215ENST00000441986 FBLN2P98095 1184 aa11.47□□□□□ -0.57
HDAC9-215ENST00000441986 CACNB1Q02641 598 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-215ENST00000441986 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
HDAC9-215ENST00000441986 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-215ENST00000441986 AQRO60306 1485 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC9-215ENST00000441986 PRDM2Q13029 1718 aa11.4□□□□□ -0.58
HDAC9-215ENST00000441986 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
HDAC9-215ENST00000441986 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
HDAC9-215ENST00000441986 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
HDAC9-215ENST00000441986 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
HDAC9-215ENST00000441986 CHMP7Q8WUX9 453 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-215ENST00000441986 SOGA1O94964 1423 aa11.35□□□□□ -0.59
HDAC9-215ENST00000441986 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
HDAC9-215ENST00000441986 TDRD9Q8NDG6 1382 aaKnown RBP11.33□□□□□ -0.6
HDAC9-215ENST00000441986 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
HDAC9-215ENST00000441986 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms