RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 HMGXB3Q12766 1538 aa12.77□□□□□ -0.37
LDB2-202ENST00000441778 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.37
LDB2-202ENST00000441778 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.37
LDB2-202ENST00000441778 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
LDB2-202ENST00000441778 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
LDB2-202ENST00000441778 CFTRP13569 1480 aa12.73□□□□□ -0.37
LDB2-202ENST00000441778 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
LDB2-202ENST00000441778 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
LDB2-202ENST00000441778 PCF11O94913 1555 aaKnown RBP12.72□□□□□ -0.37
LDB2-202ENST00000441778 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
LDB2-202ENST00000441778 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
LDB2-202ENST00000441778 IGF1RP08069 1367 aa12.71□□□□□ -0.38
LDB2-202ENST00000441778 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
LDB2-202ENST00000441778 TRIM52Q96A61 297 aa12.7□□□□□ -0.38
LDB2-202ENST00000441778 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
LDB2-202ENST00000441778 CCER2I3L3R5 266 aa12.69□□□□□ -0.38
LDB2-202ENST00000441778 NEFLP07196 543 aa12.69□□□□□ -0.38
LDB2-202ENST00000441778 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
LDB2-202ENST00000441778 CARMIL1Q5VZK9 1371 aa12.65□□□□□ -0.38
LDB2-202ENST00000441778 ANP32CO43423 234 aa12.65□□□□□ -0.38
LDB2-202ENST00000441778 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
LDB2-202ENST00000441778 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
LDB2-202ENST00000441778 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
LDB2-202ENST00000441778 MSH5O43196 834 aa12.6□□□□□ -0.39
LDB2-202ENST00000441778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
LDB2-202ENST00000441778 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
LDB2-202ENST00000441778 FHOD3Q2V2M9 1422 aa12.59□□□□□ -0.39
LDB2-202ENST00000441778 CCDC18Q5T9S5 1454 aa12.58□□□□□ -0.4
LDB2-202ENST00000441778 TONSLQ96HA7 1378 aa12.58□□□□□ -0.4
LDB2-202ENST00000441778 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
LDB2-202ENST00000441778 KDM5BQ9UGL1 1544 aa12.56□□□□□ -0.4
LDB2-202ENST00000441778 PTPN23Q9H3S7 1636 aa12.56□□□□□ -0.4
LDB2-202ENST00000441778 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
LDB2-202ENST00000441778 CASKIN1Q8WXD9 1431 aa12.56□□□□□ -0.4
LDB2-202ENST00000441778 EFCAB5A4FU69 1503 aa12.55□□□□□ -0.4
LDB2-202ENST00000441778 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
LDB2-202ENST00000441778 AQRO60306 1485 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDB2-202ENST00000441778 UACAQ9BZF9 1416 aa12.54□□□□□ -0.4
LDB2-202ENST00000441778 CTTNBP2Q8WZ74 1663 aa12.53□□□□□ -0.4
LDB2-202ENST00000441778 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
LDB2-202ENST00000441778 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.4
LDB2-202ENST00000441778 IRX6P78412 446 aaPredicted RBP12.52□□□□□ -0.41
LDB2-202ENST00000441778 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.41
LDB2-202ENST00000441778 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
LDB2-202ENST00000441778 CADPSQ9ULU8 1353 aa12.5□□□□□ -0.41
LDB2-202ENST00000441778 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
LDB2-202ENST00000441778 NAIPQ13075 1403 aa12.49□□□□□ -0.41
LDB2-202ENST00000441778 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
LDB2-202ENST00000441778 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
LDB2-202ENST00000441778 CUL7Q14999 1698 aa12.47□□□□□ -0.41
LDB2-202ENST00000441778 WASHC2AQ641Q2 1341 aa12.46□□□□□ -0.41
LDB2-202ENST00000441778 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.41
LDB2-202ENST00000441778 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
LDB2-202ENST00000441778 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
LDB2-202ENST00000441778 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
LDB2-202ENST00000441778 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
LDB2-202ENST00000441778 MYOM3Q5VTT5 1437 aa12.44□□□□□ -0.42
LDB2-202ENST00000441778 HSPA5P11021 654 aaKnown RBP12.43□□□□□ -0.42
LDB2-202ENST00000441778 DENND4BO75064 1496 aaPredicted RBP12.43□□□□□ -0.42
LDB2-202ENST00000441778 SUPT6HQ7KZ85 1726 aaKnown RBP12.43□□□□□ -0.42
LDB2-202ENST00000441778 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
LDB2-202ENST00000441778 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
LDB2-202ENST00000441778 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
LDB2-202ENST00000441778 GCC2Q8IWJ2 1684 aa12.42□□□□□ -0.42
LDB2-202ENST00000441778 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
LDB2-202ENST00000441778 SAMD9Q5K651 1589 aa12.42□□□□□ -0.42
LDB2-202ENST00000441778 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
LDB2-202ENST00000441778 CNTLNQ9NXG0 1405 aa12.41□□□□□ -0.42
LDB2-202ENST00000441778 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
LDB2-202ENST00000441778 ERICH6BQ5W0A0 696 aa12.4□□□□□ -0.42
LDB2-202ENST00000441778 ERICH6Q7L0X2 663 aa12.4□□□□□ -0.42
LDB2-202ENST00000441778 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
LDB2-202ENST00000441778 KDM6BO15054 1643 aa12.39□□□□□ -0.43
LDB2-202ENST00000441778 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
LDB2-202ENST00000441778 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
LDB2-202ENST00000441778 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
LDB2-202ENST00000441778 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
LDB2-202ENST00000441778 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
LDB2-202ENST00000441778 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
LDB2-202ENST00000441778 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
LDB2-202ENST00000441778 C11orf95C9JLR9 678 aaPredicted RBP12.35□□□□□ -0.43
LDB2-202ENST00000441778 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
LDB2-202ENST00000441778 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
LDB2-202ENST00000441778 POLR1AO95602 1720 aaPredicted RBP12.34□□□□□ -0.43
LDB2-202ENST00000441778 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
LDB2-202ENST00000441778 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
LDB2-202ENST00000441778 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
LDB2-202ENST00000441778 CCDC7Q96M83 1385 aa12.34□□□□□ -0.43
LDB2-202ENST00000441778 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.44
LDB2-202ENST00000441778 FAM9BQ8IZU0 186 aa12.33□□□□□ -0.44
LDB2-202ENST00000441778 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
LDB2-202ENST00000441778 CHIC2Q9UKJ5 165 aa12.32□□□□□ -0.44
LDB2-202ENST00000441778 MRS2Q9HD23 443 aa12.31□□□□□ -0.44
LDB2-202ENST00000441778 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
LDB2-202ENST00000441778 AKNAQ7Z591 1439 aa12.31□□□□□ -0.44
LDB2-202ENST00000441778 L3MBTL2Q969R5 705 aa12.31□□□□□ -0.44
LDB2-202ENST00000441778 NESP48681 1621 aa12.28□□□□□ -0.44
LDB2-202ENST00000441778 FOXD1Q16676 465 aa12.28□□□□□ -0.44
LDB2-202ENST00000441778 MPHOSPH9Q99550 1183 aa12.28□□□□□ -0.44
LDB2-202ENST00000441778 TEX14Q8IWB6 1497 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms