RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 MAPKBP1O60336 1514 aa19.06■□□□□ 0.64
LINC02048-201ENST00000440556 NOP58Q9Y2X3 529 aaKnown RBP19.04■□□□□ 0.64
LINC02048-201ENST00000440556 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
LINC02048-201ENST00000440556 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
LINC02048-201ENST00000440556 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
LINC02048-201ENST00000440556 TOP2BQ02880 1626 aa19.02■□□□□ 0.64
LINC02048-201ENST00000440556 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
LINC02048-201ENST00000440556 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.63
LINC02048-201ENST00000440556 WDR97A6NE52 1622 aa19■□□□□ 0.63
LINC02048-201ENST00000440556 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
LINC02048-201ENST00000440556 RAPGEF2Q9Y4G8 1499 aa19■□□□□ 0.63
LINC02048-201ENST00000440556 NESP48681 1621 aa18.99■□□□□ 0.63
LINC02048-201ENST00000440556 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
LINC02048-201ENST00000440556 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
LINC02048-201ENST00000440556 RAB3GAP2Q9H2M9 1393 aa18.94■□□□□ 0.62
LINC02048-201ENST00000440556 RTL5Q5HYW3 569 aaPredicted RBP18.93■□□□□ 0.62
LINC02048-201ENST00000440556 UBE2Q2Q8WVN8 375 aa18.93■□□□□ 0.62
LINC02048-201ENST00000440556 CFTRP13569 1480 aa18.91■□□□□ 0.62
LINC02048-201ENST00000440556 SETD5Q9C0A6 1442 aa18.91■□□□□ 0.62
LINC02048-201ENST00000440556 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
LINC02048-201ENST00000440556 SALL2Q9Y467 1007 aaPredicted RBP18.87■□□□□ 0.61
LINC02048-201ENST00000440556 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
LINC02048-201ENST00000440556 MAP3K1Q13233 1512 aa18.85■□□□□ 0.61
LINC02048-201ENST00000440556 HNRNPUQ00839 825 aaKnown RBP eCLIP18.83■□□□□ 0.6
LINC02048-201ENST00000440556 ANP32AP39687 249 aaKnown RBP18.82■□□□□ 0.6
LINC02048-201ENST00000440556 NBR1Q14596 966 aa18.82■□□□□ 0.6
LINC02048-201ENST00000440556 IPO9Q96P70 1041 aaKnown RBP18.82■□□□□ 0.6
LINC02048-201ENST00000440556 PRXQ9BXM0 1461 aa18.8■□□□□ 0.6
LINC02048-201ENST00000440556 USP35Q9P2H5 1018 aa18.79■□□□□ 0.6
LINC02048-201ENST00000440556 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.6
LINC02048-201ENST00000440556 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
LINC02048-201ENST00000440556 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
LINC02048-201ENST00000440556 C11orf95C9JLR9 678 aaPredicted RBP18.76■□□□□ 0.59
LINC02048-201ENST00000440556 PAK3O75914 559 aaPredicted RBP18.76■□□□□ 0.59
LINC02048-201ENST00000440556 IRX6P78412 446 aaPredicted RBP18.75■□□□□ 0.59
LINC02048-201ENST00000440556 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
LINC02048-201ENST00000440556 KIF27Q86VH2 1401 aa18.7■□□□□ 0.58
LINC02048-201ENST00000440556 SIN3AQ96ST3 1273 aa18.7■□□□□ 0.58
LINC02048-201ENST00000440556 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
LINC02048-201ENST00000440556 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
LINC02048-201ENST00000440556 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
LINC02048-201ENST00000440556 CUX1P39880 1505 aa18.67■□□□□ 0.58
LINC02048-201ENST00000440556 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
LINC02048-201ENST00000440556 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
LINC02048-201ENST00000440556 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
LINC02048-201ENST00000440556 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
LINC02048-201ENST00000440556 IL27Q8NEV9 243 aa18.66■□□□□ 0.58
LINC02048-201ENST00000440556 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
LINC02048-201ENST00000440556 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
LINC02048-201ENST00000440556 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
LINC02048-201ENST00000440556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC02048-201ENST00000440556 ARHGAP35Q9NRY4 1499 aa18.61■□□□□ 0.57
LINC02048-201ENST00000440556 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
LINC02048-201ENST00000440556 NCOA2Q15596 1464 aa18.58■□□□□ 0.57
LINC02048-201ENST00000440556 ERCC6Q03468 1493 aa18.58■□□□□ 0.56
LINC02048-201ENST00000440556 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
LINC02048-201ENST00000440556 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
LINC02048-201ENST00000440556 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
LINC02048-201ENST00000440556 SMG6Q86US8 1419 aaKnown RBP18.55■□□□□ 0.56
LINC02048-201ENST00000440556 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
LINC02048-201ENST00000440556 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
LINC02048-201ENST00000440556 CNTLNQ9NXG0 1405 aa18.54■□□□□ 0.56
LINC02048-201ENST00000440556 NEFMP07197 916 aa18.5■□□□□ 0.55
LINC02048-201ENST00000440556 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
LINC02048-201ENST00000440556 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.5■□□□□ 0.55
LINC02048-201ENST00000440556 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
LINC02048-201ENST00000440556 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
LINC02048-201ENST00000440556 PHLDB1Q86UU1 1377 aa18.48■□□□□ 0.55
LINC02048-201ENST00000440556 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
LINC02048-201ENST00000440556 UACAQ9BZF9 1416 aa18.47■□□□□ 0.55
LINC02048-201ENST00000440556 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
LINC02048-201ENST00000440556 FAM50AQ14320 339 aaKnown RBP18.44■□□□□ 0.54
LINC02048-201ENST00000440556 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
LINC02048-201ENST00000440556 PRKRIP1Q9H875 184 aaPredicted RBP18.43■□□□□ 0.54
LINC02048-201ENST00000440556 KDM5BQ9UGL1 1544 aa18.43■□□□□ 0.54
LINC02048-201ENST00000440556 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
LINC02048-201ENST00000440556 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
LINC02048-201ENST00000440556 POLR1AO95602 1720 aaPredicted RBP18.42■□□□□ 0.54
LINC02048-201ENST00000440556 MS4A1P11836 297 aa18.42■□□□□ 0.54
LINC02048-201ENST00000440556 GSE1Q14687 1217 aa18.42■□□□□ 0.54
LINC02048-201ENST00000440556 NUDCQ9Y266 331 aa18.42■□□□□ 0.54
LINC02048-201ENST00000440556 DDRGK1Q96HY6 314 aa18.41■□□□□ 0.54
LINC02048-201ENST00000440556 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
LINC02048-201ENST00000440556 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
LINC02048-201ENST00000440556 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
LINC02048-201ENST00000440556 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
LINC02048-201ENST00000440556 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC02048-201ENST00000440556 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
LINC02048-201ENST00000440556 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
LINC02048-201ENST00000440556 WDR62O43379 1518 aa18.38■□□□□ 0.53
LINC02048-201ENST00000440556 HSPA5P11021 654 aaKnown RBP18.37■□□□□ 0.53
LINC02048-201ENST00000440556 GLIPR1L2Q4G1C9 344 aa18.37■□□□□ 0.53
LINC02048-201ENST00000440556 HFM1A2PYH4 1435 aa18.37■□□□□ 0.53
LINC02048-201ENST00000440556 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
LINC02048-201ENST00000440556 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
LINC02048-201ENST00000440556 EFCAB5A4FU69 1503 aa18.35■□□□□ 0.53
LINC02048-201ENST00000440556 EIF5BO60841 1220 aaKnown RBP18.35■□□□□ 0.53
LINC02048-201ENST00000440556 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
LINC02048-201ENST00000440556 CUL7Q14999 1698 aa18.34■□□□□ 0.53
LINC02048-201ENST00000440556 CCDC7Q96M83 1385 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms