RNA–Protein interactions for RNA: ENST00000439181.5

PBRM1-214, Transcript of polybromo 1, humanhuman

TSL 4

Gene PBRM1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-214ENST00000439181 WDR62O43379 1518 aa12.98□□□□□ -0.33
PBRM1-214ENST00000439181 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
PBRM1-214ENST00000439181 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
PBRM1-214ENST00000439181 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
PBRM1-214ENST00000439181 CFTRP13569 1480 aa12.92□□□□□ -0.34
PBRM1-214ENST00000439181 EVX2Q03828 476 aa12.92□□□□□ -0.34
PBRM1-214ENST00000439181 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
PBRM1-214ENST00000439181 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
PBRM1-214ENST00000439181 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
PBRM1-214ENST00000439181 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
PBRM1-214ENST00000439181 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
PBRM1-214ENST00000439181 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
PBRM1-214ENST00000439181 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
PBRM1-214ENST00000439181 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
PBRM1-214ENST00000439181 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
PBRM1-214ENST00000439181 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
PBRM1-214ENST00000439181 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
PBRM1-214ENST00000439181 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
PBRM1-214ENST00000439181 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
PBRM1-214ENST00000439181 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
PBRM1-214ENST00000439181 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
PBRM1-214ENST00000439181 GABBR2O75899 941 aa12.65□□□□□ -0.38
PBRM1-214ENST00000439181 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
PBRM1-214ENST00000439181 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
PBRM1-214ENST00000439181 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
PBRM1-214ENST00000439181 ZNF608Q9ULD9 1512 aaPredicted RBP12.6□□□□□ -0.39
PBRM1-214ENST00000439181 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
PBRM1-214ENST00000439181 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
PBRM1-214ENST00000439181 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
PBRM1-214ENST00000439181 LHX8Q68G74 356 aa12.54□□□□□ -0.4
PBRM1-214ENST00000439181 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
PBRM1-214ENST00000439181 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
PBRM1-214ENST00000439181 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
PBRM1-214ENST00000439181 CHD1O14646 1710 aa12.5□□□□□ -0.41
PBRM1-214ENST00000439181 ARHGEF11O15085 1522 aa12.49□□□□□ -0.41
PBRM1-214ENST00000439181 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
PBRM1-214ENST00000439181 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
PBRM1-214ENST00000439181 SOGA1O94964 1423 aa12.47□□□□□ -0.41
PBRM1-214ENST00000439181 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
PBRM1-214ENST00000439181 CUX1P39880 1505 aa12.44□□□□□ -0.42
PBRM1-214ENST00000439181 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
PBRM1-214ENST00000439181 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
PBRM1-214ENST00000439181 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
PBRM1-214ENST00000439181 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
PBRM1-214ENST00000439181 GRIN2BQ13224 1484 aa12.41□□□□□ -0.42
PBRM1-214ENST00000439181 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
PBRM1-214ENST00000439181 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
PBRM1-214ENST00000439181 PBRM1Q86U86 1689 aa12.38□□□□□ -0.43
PBRM1-214ENST00000439181 SYNJ2O15056 1496 aa12.38□□□□□ -0.43
PBRM1-214ENST00000439181 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
PBRM1-214ENST00000439181 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
PBRM1-214ENST00000439181 ABCA10Q8WWZ4 1543 aa12.36□□□□□ -0.43
PBRM1-214ENST00000439181 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
PBRM1-214ENST00000439181 CLCN6P51797 869 aa12.35□□□□□ -0.43
PBRM1-214ENST00000439181 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
PBRM1-214ENST00000439181 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
PBRM1-214ENST00000439181 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
PBRM1-214ENST00000439181 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
PBRM1-214ENST00000439181 WRNQ14191 1432 aaPredicted RBP eCLIP12.32□□□□□ -0.44
PBRM1-214ENST00000439181 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
PBRM1-214ENST00000439181 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
PBRM1-214ENST00000439181 CYB5RLQ6IPT4 315 aa12.31□□□□□ -0.44
PBRM1-214ENST00000439181 DCBLD2Q96PD2 775 aa12.28□□□□□ -0.44
PBRM1-214ENST00000439181 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
PBRM1-214ENST00000439181 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
PBRM1-214ENST00000439181 ERICH3Q5RHP9 1530 aa12.23□□□□□ -0.45
PBRM1-214ENST00000439181 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
PBRM1-214ENST00000439181 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
PBRM1-214ENST00000439181 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
PBRM1-214ENST00000439181 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
PBRM1-214ENST00000439181 NUP160Q12769 1436 aa12.19□□□□□ -0.46
PBRM1-214ENST00000439181 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
PBRM1-214ENST00000439181 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
PBRM1-214ENST00000439181 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
PBRM1-214ENST00000439181 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
PBRM1-214ENST00000439181 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
PBRM1-214ENST00000439181 CUL7Q14999 1698 aa12.1□□□□□ -0.47
PBRM1-214ENST00000439181 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
PBRM1-214ENST00000439181 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
PBRM1-214ENST00000439181 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
PBRM1-214ENST00000439181 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
PBRM1-214ENST00000439181 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
PBRM1-214ENST00000439181 PLSCR2Q9NRY7 297 aa12.07□□□□□ -0.48
PBRM1-214ENST00000439181 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
PBRM1-214ENST00000439181 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
PBRM1-214ENST00000439181 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
PBRM1-214ENST00000439181 JPH4Q96JJ6 628 aa12□□□□□ -0.49
PBRM1-214ENST00000439181 PHF12Q96QT6 1004 aa12□□□□□ -0.49
PBRM1-214ENST00000439181 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
PBRM1-214ENST00000439181 IGF1RP08069 1367 aa11.97□□□□□ -0.49
PBRM1-214ENST00000439181 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
PBRM1-214ENST00000439181 MAPKBP1O60336 1514 aa11.96□□□□□ -0.49
PBRM1-214ENST00000439181 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
PBRM1-214ENST00000439181 CARMIL2Q6F5E8 1435 aa11.94□□□□□ -0.5
PBRM1-214ENST00000439181 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
PBRM1-214ENST00000439181 ADCY10Q96PN6 1610 aa11.93□□□□□ -0.5
PBRM1-214ENST00000439181 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
PBRM1-214ENST00000439181 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
PBRM1-214ENST00000439181 ABCC10Q5T3U5 1492 aa11.9□□□□□ -0.5
PBRM1-214ENST00000439181 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms