RNA–Protein interactions for RNA: ENST00000439181.5

PBRM1-214, Transcript of polybromo 1, humanhuman

TSL 4

Gene PBRM1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-214ENST00000439181 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
PBRM1-214ENST00000439181 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
PBRM1-214ENST00000439181 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
PBRM1-214ENST00000439181 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
PBRM1-214ENST00000439181 FOXD1Q16676 465 aa19.43■□□□□ 0.7
PBRM1-214ENST00000439181 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
PBRM1-214ENST00000439181 MSH5O43196 834 aa18.36■□□□□ 0.53
PBRM1-214ENST00000439181 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
PBRM1-214ENST00000439181 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
PBRM1-214ENST00000439181 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
PBRM1-214ENST00000439181 ADRA2BP18089 450 aa17.83■□□□□ 0.44
PBRM1-214ENST00000439181 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
PBRM1-214ENST00000439181 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
PBRM1-214ENST00000439181 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
PBRM1-214ENST00000439181 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
PBRM1-214ENST00000439181 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
PBRM1-214ENST00000439181 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
PBRM1-214ENST00000439181 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
PBRM1-214ENST00000439181 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
PBRM1-214ENST00000439181 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
PBRM1-214ENST00000439181 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
PBRM1-214ENST00000439181 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
PBRM1-214ENST00000439181 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
PBRM1-214ENST00000439181 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
PBRM1-214ENST00000439181 ABCC9O60706 1549 aa15.38■□□□□ 0.05
PBRM1-214ENST00000439181 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
PBRM1-214ENST00000439181 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
PBRM1-214ENST00000439181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.011e-6■■□□□ 12.1
PBRM1-214ENST00000439181 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
PBRM1-214ENST00000439181 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
PBRM1-214ENST00000439181 NACADO15069 1562 aa14.66□□□□□ -0.06
PBRM1-214ENST00000439181 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
PBRM1-214ENST00000439181 CAPN15O75808 1086 aa14.56□□□□□ -0.08
PBRM1-214ENST00000439181 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
PBRM1-214ENST00000439181 DSG3P32926 999 aa14.5□□□□□ -0.09
PBRM1-214ENST00000439181 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
PBRM1-214ENST00000439181 POTEHQ6S545 545 aa14.44□□□□□ -0.1
PBRM1-214ENST00000439181 DCAF8L2P0C7V8 631 aa14.42□□□□□ -0.1
PBRM1-214ENST00000439181 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
PBRM1-214ENST00000439181 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
PBRM1-214ENST00000439181 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
PBRM1-214ENST00000439181 KCNA4P22459 653 aa14.24□□□□□ -0.13
PBRM1-214ENST00000439181 APLP2Q06481 763 aa14.24□□□□□ -0.13
PBRM1-214ENST00000439181 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
PBRM1-214ENST00000439181 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
PBRM1-214ENST00000439181 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
PBRM1-214ENST00000439181 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
PBRM1-214ENST00000439181 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
PBRM1-214ENST00000439181 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
PBRM1-214ENST00000439181 ABCB7O75027 752 aa14.16□□□□□ -0.14
PBRM1-214ENST00000439181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
PBRM1-214ENST00000439181 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
PBRM1-214ENST00000439181 SCRIBQ14160 1630 aa14.08□□□□□ -0.16
PBRM1-214ENST00000439181 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
PBRM1-214ENST00000439181 EIF4G1Q04637 1599 aaKnown RBP13.93□□□□□ -0.18
PBRM1-214ENST00000439181 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
PBRM1-214ENST00000439181 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
PBRM1-214ENST00000439181 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
PBRM1-214ENST00000439181 CECR2Q9BXF3 1484 aa13.89□□□□□ -0.19
PBRM1-214ENST00000439181 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
PBRM1-214ENST00000439181 POLA2Q14181 598 aa13.74□□□□□ -0.21
PBRM1-214ENST00000439181 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
PBRM1-214ENST00000439181 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
PBRM1-214ENST00000439181 SMARCA2P51531 1590 aa13.47□□□□□ -0.25
PBRM1-214ENST00000439181 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
PBRM1-214ENST00000439181 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
PBRM1-214ENST00000439181 SMARCA4P51532 1647 aa13.46□□□□□ -0.26
PBRM1-214ENST00000439181 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
PBRM1-214ENST00000439181 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
PBRM1-214ENST00000439181 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
PBRM1-214ENST00000439181 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
PBRM1-214ENST00000439181 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
PBRM1-214ENST00000439181 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
PBRM1-214ENST00000439181 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
PBRM1-214ENST00000439181 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
PBRM1-214ENST00000439181 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
PBRM1-214ENST00000439181 CUX2O14529 1486 aa13.35□□□□□ -0.27
PBRM1-214ENST00000439181 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
PBRM1-214ENST00000439181 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
PBRM1-214ENST00000439181 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
PBRM1-214ENST00000439181 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
PBRM1-214ENST00000439181 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
PBRM1-214ENST00000439181 MROH2BQ7Z745 1585 aa13.23□□□□□ -0.29
PBRM1-214ENST00000439181 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
PBRM1-214ENST00000439181 NESP48681 1621 aa13.18□□□□□ -0.3
PBRM1-214ENST00000439181 HAX1O00165 279 aa13.18□□□□□ -0.3
PBRM1-214ENST00000439181 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
PBRM1-214ENST00000439181 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
PBRM1-214ENST00000439181 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
PBRM1-214ENST00000439181 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.31
PBRM1-214ENST00000439181 WIZO95785 1651 aa13.08□□□□□ -0.32
PBRM1-214ENST00000439181 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
PBRM1-214ENST00000439181 ZBTB22O15209 634 aa13.04□□□□□ -0.32
PBRM1-214ENST00000439181 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
PBRM1-214ENST00000439181 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
PBRM1-214ENST00000439181 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
PBRM1-214ENST00000439181 SPDYE6P0CI01 402 aa13□□□□□ -0.33
PBRM1-214ENST00000439181 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
PBRM1-214ENST00000439181 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
PBRM1-214ENST00000439181 FBLN2P98095 1184 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms