RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
TOP3B-208ENST00000437929 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
TOP3B-208ENST00000437929 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
TOP3B-208ENST00000437929 FBLN2P98095 1184 aa13.03□□□□□ -0.32
TOP3B-208ENST00000437929 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
TOP3B-208ENST00000437929 CHD1O14646 1710 aa13□□□□□ -0.33
TOP3B-208ENST00000437929 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-208ENST00000437929 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.334e-7■■■■□ 22.6
TOP3B-208ENST00000437929 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
TOP3B-208ENST00000437929 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
TOP3B-208ENST00000437929 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
TOP3B-208ENST00000437929 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
TOP3B-208ENST00000437929 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-208ENST00000437929 DSG3P32926 999 aa12.91□□□□□ -0.34
TOP3B-208ENST00000437929 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
TOP3B-208ENST00000437929 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
TOP3B-208ENST00000437929 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-208ENST00000437929 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
TOP3B-208ENST00000437929 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
TOP3B-208ENST00000437929 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
TOP3B-208ENST00000437929 SOGA1O94964 1423 aa12.82□□□□□ -0.36
TOP3B-208ENST00000437929 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
TOP3B-208ENST00000437929 CHMP7Q8WUX9 453 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-208ENST00000437929 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
TOP3B-208ENST00000437929 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
TOP3B-208ENST00000437929 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-208ENST00000437929 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
TOP3B-208ENST00000437929 CUX1P39880 1505 aa12.73□□□□□ -0.37
TOP3B-208ENST00000437929 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
TOP3B-208ENST00000437929 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
TOP3B-208ENST00000437929 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
TOP3B-208ENST00000437929 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
TOP3B-208ENST00000437929 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
TOP3B-208ENST00000437929 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
TOP3B-208ENST00000437929 PROM2Q8N271 834 aa12.63□□□□□ -0.39
TOP3B-208ENST00000437929 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-208ENST00000437929 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
TOP3B-208ENST00000437929 ABCA5Q8WWZ7 1642 aa12.61□□□□□ -0.39
TOP3B-208ENST00000437929 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
TOP3B-208ENST00000437929 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
TOP3B-208ENST00000437929 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 CEP170Q5SW79 1584 aa12.57□□□□□ -0.4
TOP3B-208ENST00000437929 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
TOP3B-208ENST00000437929 NUP160Q12769 1436 aa12.53□□□□□ -0.4
TOP3B-208ENST00000437929 KIF13AQ9H1H9 1805 aa12.52□□□□□ -0.41
TOP3B-208ENST00000437929 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
TOP3B-208ENST00000437929 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
TOP3B-208ENST00000437929 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
TOP3B-208ENST00000437929 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
TOP3B-208ENST00000437929 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
TOP3B-208ENST00000437929 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
TOP3B-208ENST00000437929 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
TOP3B-208ENST00000437929 FAM69CQ0P6D2 419 aa12.43□□□□□ -0.42
TOP3B-208ENST00000437929 TOP2BQ02880 1626 aa12.43□□□□□ -0.42
TOP3B-208ENST00000437929 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
TOP3B-208ENST00000437929 SUPT5HO00267 1087 aaKnown RBP12.41□□□□□ -0.42
TOP3B-208ENST00000437929 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
TOP3B-208ENST00000437929 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.43
TOP3B-208ENST00000437929 DIP2BQ9P265 1576 aa12.38□□□□□ -0.43
TOP3B-208ENST00000437929 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
TOP3B-208ENST00000437929 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
TOP3B-208ENST00000437929 ADCY10Q96PN6 1610 aa12.37□□□□□ -0.43
TOP3B-208ENST00000437929 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
TOP3B-208ENST00000437929 KDM6BO15054 1643 aa12.36□□□□□ -0.43
TOP3B-208ENST00000437929 MAPKBP1O60336 1514 aa12.36□□□□□ -0.43
TOP3B-208ENST00000437929 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
TOP3B-208ENST00000437929 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-208ENST00000437929 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
TOP3B-208ENST00000437929 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
TOP3B-208ENST00000437929 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-208ENST00000437929 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-208ENST00000437929 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
TOP3B-208ENST00000437929 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
TOP3B-208ENST00000437929 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
TOP3B-208ENST00000437929 MIER1Q8N108 512 aa12.23□□□□□ -0.45
TOP3B-208ENST00000437929 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
TOP3B-208ENST00000437929 IGF1RP08069 1367 aa12.21□□□□□ -0.45
TOP3B-208ENST00000437929 PTPRGP23470 1445 aa12.2□□□□□ -0.46
TOP3B-208ENST00000437929 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
TOP3B-208ENST00000437929 ADGRL1O94910 1474 aa12.2□□□□□ -0.46
TOP3B-208ENST00000437929 CUL7Q14999 1698 aa12.19□□□□□ -0.46
TOP3B-208ENST00000437929 ABCC2Q92887 1545 aa12.18□□□□□ -0.46
TOP3B-208ENST00000437929 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
TOP3B-208ENST00000437929 KIF27Q86VH2 1401 aa12.17□□□□□ -0.46
TOP3B-208ENST00000437929 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
TOP3B-208ENST00000437929 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
TOP3B-208ENST00000437929 GLI2P10070 1586 aa12.15□□□□□ -0.46
TOP3B-208ENST00000437929 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
TOP3B-208ENST00000437929 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
TOP3B-208ENST00000437929 PLB1Q6P1J6 1458 aa12.14□□□□□ -0.47
TOP3B-208ENST00000437929 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-208ENST00000437929 CARMIL2Q6F5E8 1435 aa12.14□□□□□ -0.47
TOP3B-208ENST00000437929 SPOCK2Q92563 424 aa12.14□□□□□ -0.47
TOP3B-208ENST00000437929 CARMIL1Q5VZK9 1371 aa12.13□□□□□ -0.47
TOP3B-208ENST00000437929 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
TOP3B-208ENST00000437929 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-208ENST00000437929 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms