RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
TOP3B-208ENST00000437929 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
TOP3B-208ENST00000437929 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
TOP3B-208ENST00000437929 FBLN2P98095 1184 aa13.03□□□□□ -0.32
TOP3B-208ENST00000437929 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
TOP3B-208ENST00000437929 CHD1O14646 1710 aa13□□□□□ -0.33
TOP3B-208ENST00000437929 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-208ENST00000437929 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.334e-7■■■■□ 22.6
TOP3B-208ENST00000437929 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
TOP3B-208ENST00000437929 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
TOP3B-208ENST00000437929 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
TOP3B-208ENST00000437929 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
TOP3B-208ENST00000437929 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-208ENST00000437929 DSG3P32926 999 aa12.91□□□□□ -0.34
TOP3B-208ENST00000437929 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
TOP3B-208ENST00000437929 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
TOP3B-208ENST00000437929 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-208ENST00000437929 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
TOP3B-208ENST00000437929 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
TOP3B-208ENST00000437929 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
TOP3B-208ENST00000437929 SOGA1O94964 1423 aa12.82□□□□□ -0.36
TOP3B-208ENST00000437929 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
TOP3B-208ENST00000437929 CHMP7Q8WUX9 453 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-208ENST00000437929 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
TOP3B-208ENST00000437929 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
TOP3B-208ENST00000437929 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-208ENST00000437929 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
TOP3B-208ENST00000437929 CUX1P39880 1505 aa12.73□□□□□ -0.37
TOP3B-208ENST00000437929 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
TOP3B-208ENST00000437929 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
TOP3B-208ENST00000437929 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
TOP3B-208ENST00000437929 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
TOP3B-208ENST00000437929 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
TOP3B-208ENST00000437929 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
TOP3B-208ENST00000437929 PROM2Q8N271 834 aa12.63□□□□□ -0.39
TOP3B-208ENST00000437929 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-208ENST00000437929 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
TOP3B-208ENST00000437929 ABCA5Q8WWZ7 1642 aa12.61□□□□□ -0.39
TOP3B-208ENST00000437929 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
TOP3B-208ENST00000437929 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
TOP3B-208ENST00000437929 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
TOP3B-208ENST00000437929 CEP170Q5SW79 1584 aa12.57□□□□□ -0.4
TOP3B-208ENST00000437929 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
TOP3B-208ENST00000437929 NUP160Q12769 1436 aa12.53□□□□□ -0.4
TOP3B-208ENST00000437929 KIF13AQ9H1H9 1805 aa12.52□□□□□ -0.41
TOP3B-208ENST00000437929 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
TOP3B-208ENST00000437929 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
TOP3B-208ENST00000437929 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
TOP3B-208ENST00000437929 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
TOP3B-208ENST00000437929 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
TOP3B-208ENST00000437929 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
TOP3B-208ENST00000437929 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
TOP3B-208ENST00000437929 FAM69CQ0P6D2 419 aa12.43□□□□□ -0.42
TOP3B-208ENST00000437929 TOP2BQ02880 1626 aa12.43□□□□□ -0.42
TOP3B-208ENST00000437929 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
TOP3B-208ENST00000437929 SUPT5HO00267 1087 aaKnown RBP12.41□□□□□ -0.42
TOP3B-208ENST00000437929 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
TOP3B-208ENST00000437929 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.43
TOP3B-208ENST00000437929 DIP2BQ9P265 1576 aa12.38□□□□□ -0.43
TOP3B-208ENST00000437929 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
TOP3B-208ENST00000437929 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
TOP3B-208ENST00000437929 ADCY10Q96PN6 1610 aa12.37□□□□□ -0.43
TOP3B-208ENST00000437929 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
TOP3B-208ENST00000437929 KDM6BO15054 1643 aa12.36□□□□□ -0.43
TOP3B-208ENST00000437929 MAPKBP1O60336 1514 aa12.36□□□□□ -0.43
TOP3B-208ENST00000437929 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
TOP3B-208ENST00000437929 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-208ENST00000437929 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
TOP3B-208ENST00000437929 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
TOP3B-208ENST00000437929 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-208ENST00000437929 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-208ENST00000437929 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
TOP3B-208ENST00000437929 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
TOP3B-208ENST00000437929 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
TOP3B-208ENST00000437929 MIER1Q8N108 512 aa12.23□□□□□ -0.45
TOP3B-208ENST00000437929 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
TOP3B-208ENST00000437929 IGF1RP08069 1367 aa12.21□□□□□ -0.45
TOP3B-208ENST00000437929 PTPRGP23470 1445 aa12.2□□□□□ -0.46
TOP3B-208ENST00000437929 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
TOP3B-208ENST00000437929 ADGRL1O94910 1474 aa12.2□□□□□ -0.46
TOP3B-208ENST00000437929 CUL7Q14999 1698 aa12.19□□□□□ -0.46
TOP3B-208ENST00000437929 ABCC2Q92887 1545 aa12.18□□□□□ -0.46
TOP3B-208ENST00000437929 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
TOP3B-208ENST00000437929 KIF27Q86VH2 1401 aa12.17□□□□□ -0.46
TOP3B-208ENST00000437929 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
TOP3B-208ENST00000437929 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
TOP3B-208ENST00000437929 GLI2P10070 1586 aa12.15□□□□□ -0.46
TOP3B-208ENST00000437929 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
TOP3B-208ENST00000437929 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
TOP3B-208ENST00000437929 PLB1Q6P1J6 1458 aa12.14□□□□□ -0.47
TOP3B-208ENST00000437929 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-208ENST00000437929 CARMIL2Q6F5E8 1435 aa12.14□□□□□ -0.47
TOP3B-208ENST00000437929 SPOCK2Q92563 424 aa12.14□□□□□ -0.47
TOP3B-208ENST00000437929 CARMIL1Q5VZK9 1371 aa12.13□□□□□ -0.47
TOP3B-208ENST00000437929 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
TOP3B-208ENST00000437929 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-208ENST00000437929 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms