RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
LINC01007-201ENST00000434537 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
LINC01007-201ENST00000434537 ABCA10Q8WWZ4 1543 aa14.38□□□□□ -0.11
LINC01007-201ENST00000434537 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
LINC01007-201ENST00000434537 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
LINC01007-201ENST00000434537 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
LINC01007-201ENST00000434537 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
LINC01007-201ENST00000434537 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
LINC01007-201ENST00000434537 ARXQ96QS3 562 aa14.32□□□□□ -0.12
LINC01007-201ENST00000434537 TTBK1Q5TCY1 1321 aaPredicted RBP14.32□□□□□ -0.12
LINC01007-201ENST00000434537 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
LINC01007-201ENST00000434537 TULP1O00294 542 aaPredicted RBP14.31□□□□□ -0.12
LINC01007-201ENST00000434537 CHD1O14646 1710 aa14.28□□□□□ -0.12
LINC01007-201ENST00000434537 CYB5RLQ6IPT4 315 aa14.28□□□□□ -0.12
LINC01007-201ENST00000434537 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
LINC01007-201ENST00000434537 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
LINC01007-201ENST00000434537 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
LINC01007-201ENST00000434537 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
LINC01007-201ENST00000434537 TDRD9Q8NDG6 1382 aaKnown RBP14.25□□□□□ -0.13
LINC01007-201ENST00000434537 CUL7Q14999 1698 aa14.24□□□□□ -0.13
LINC01007-201ENST00000434537 ARHGAP35Q9NRY4 1499 aa14.23□□□□□ -0.13
LINC01007-201ENST00000434537 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
LINC01007-201ENST00000434537 FBLN2P98095 1184 aa14.21□□□□□ -0.14
LINC01007-201ENST00000434537 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
LINC01007-201ENST00000434537 APLP2Q06481 763 aa14.17□□□□□ -0.14
LINC01007-201ENST00000434537 TPRNQ4KMQ1 711 aa14.16□□□□□ -0.14
LINC01007-201ENST00000434537 CTTNBP2Q8WZ74 1663 aa14.15□□□□□ -0.14
LINC01007-201ENST00000434537 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
LINC01007-201ENST00000434537 SNAPC4Q5SXM2 1469 aa14.14□□□□□ -0.15
LINC01007-201ENST00000434537 CLASP1Q7Z460 1538 aa14.13□□□□□ -0.15
LINC01007-201ENST00000434537 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
LINC01007-201ENST00000434537 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.16
LINC01007-201ENST00000434537 ADRA2BP18089 450 aa14.07□□□□□ -0.16
LINC01007-201ENST00000434537 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
LINC01007-201ENST00000434537 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
LINC01007-201ENST00000434537 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
LINC01007-201ENST00000434537 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
LINC01007-201ENST00000434537 EFCAB5A4FU69 1503 aa14.06□□□□□ -0.16
LINC01007-201ENST00000434537 ADAMTS12P58397 1594 aa14.06□□□□□ -0.16
LINC01007-201ENST00000434537 FHOD3Q2V2M9 1422 aa14.05□□□□□ -0.16
LINC01007-201ENST00000434537 ZBTB22O15209 634 aa14.05□□□□□ -0.16
LINC01007-201ENST00000434537 FHAD1B1AJZ9 1412 aa14.05□□□□□ -0.16
LINC01007-201ENST00000434537 BCANQ96GW7 911 aa14.04□□□□□ -0.16
LINC01007-201ENST00000434537 SYNJ2O15056 1496 aa14.03□□□□□ -0.16
LINC01007-201ENST00000434537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
LINC01007-201ENST00000434537 PCF11O94913 1555 aaKnown RBP14.03□□□□□ -0.16
LINC01007-201ENST00000434537 TIAM1Q13009 1591 aa14.01□□□□□ -0.17
LINC01007-201ENST00000434537 SAMD9Q5K651 1589 aa14□□□□□ -0.17
LINC01007-201ENST00000434537 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
LINC01007-201ENST00000434537 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
LINC01007-201ENST00000434537 CFAP43Q8NDM7 1665 aa13.97□□□□□ -0.17
LINC01007-201ENST00000434537 CCER1Q8TC90 406 aaPredicted RBP13.97□□□□□ -0.17
LINC01007-201ENST00000434537 FYCO1Q9BQS8 1478 aa13.96□□□□□ -0.17
LINC01007-201ENST00000434537 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
LINC01007-201ENST00000434537 IQGAP2Q13576 1575 aa13.95□□□□□ -0.18
LINC01007-201ENST00000434537 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
LINC01007-201ENST00000434537 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
LINC01007-201ENST00000434537 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
LINC01007-201ENST00000434537 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
LINC01007-201ENST00000434537 HOMEZQ8IX15 550 aa13.93□□□□□ -0.18
LINC01007-201ENST00000434537 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
LINC01007-201ENST00000434537 GRIN2AQ12879 1464 aa13.9□□□□□ -0.18
LINC01007-201ENST00000434537 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
LINC01007-201ENST00000434537 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
LINC01007-201ENST00000434537 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
LINC01007-201ENST00000434537 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
LINC01007-201ENST00000434537 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
LINC01007-201ENST00000434537 UGGT2Q9NYU1 1516 aa13.86□□□□□ -0.19
LINC01007-201ENST00000434537 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
LINC01007-201ENST00000434537 PHLDB1Q86UU1 1377 aa13.85□□□□□ -0.19
LINC01007-201ENST00000434537 CEP170Q5SW79 1584 aa13.85□□□□□ -0.19
LINC01007-201ENST00000434537 NUP160Q12769 1436 aa13.84□□□□□ -0.19
LINC01007-201ENST00000434537 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
LINC01007-201ENST00000434537 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
LINC01007-201ENST00000434537 DISP1Q96F81 1524 aa13.81□□□□□ -0.2
LINC01007-201ENST00000434537 SHROOM2Q13796 1616 aa13.81□□□□□ -0.2
LINC01007-201ENST00000434537 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
LINC01007-201ENST00000434537 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
LINC01007-201ENST00000434537 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
LINC01007-201ENST00000434537 ERICH6Q7L0X2 663 aa13.79□□□□□ -0.2
LINC01007-201ENST00000434537 ITGAEP38570 1179 aa13.78□□□□□ -0.2
LINC01007-201ENST00000434537 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
LINC01007-201ENST00000434537 CCDC18Q5T9S5 1454 aa13.76□□□□□ -0.21
LINC01007-201ENST00000434537 MAGI3Q5TCQ9 1506 aa13.76□□□□□ -0.21
LINC01007-201ENST00000434537 EPRSP07814 1512 aaKnown RBP13.75□□□□□ -0.21
LINC01007-201ENST00000434537 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
LINC01007-201ENST00000434537 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
LINC01007-201ENST00000434537 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
LINC01007-201ENST00000434537 SUPT6HQ7KZ85 1726 aaKnown RBP13.74□□□□□ -0.21
LINC01007-201ENST00000434537 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
LINC01007-201ENST00000434537 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
LINC01007-201ENST00000434537 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
LINC01007-201ENST00000434537 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
LINC01007-201ENST00000434537 FGD6Q6ZV73 1430 aa13.71□□□□□ -0.21
LINC01007-201ENST00000434537 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
LINC01007-201ENST00000434537 RAPGEF6Q8TEU7 1601 aa13.7□□□□□ -0.22
LINC01007-201ENST00000434537 DHX57Q6P158 1386 aaKnown RBP13.7□□□□□ -0.22
LINC01007-201ENST00000434537 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
LINC01007-201ENST00000434537 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
LINC01007-201ENST00000434537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms