RNA–Protein interactions for RNA: ENST00000434266.1

EPHA4-207, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 617 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-207ENST00000434266 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
EPHA4-207ENST00000434266 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
EPHA4-207ENST00000434266 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
EPHA4-207ENST00000434266 PROM2Q8N271 834 aa12.77□□□□□ -0.37
EPHA4-207ENST00000434266 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
EPHA4-207ENST00000434266 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
EPHA4-207ENST00000434266 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
EPHA4-207ENST00000434266 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
EPHA4-207ENST00000434266 KIF21AQ7Z4S6 1674 aa12.75□□□□□ -0.37
EPHA4-207ENST00000434266 BIVM-ERCC5R4GMW8 1640 aa12.75□□□□□ -0.37
EPHA4-207ENST00000434266 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
EPHA4-207ENST00000434266 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
EPHA4-207ENST00000434266 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
EPHA4-207ENST00000434266 WDR62O43379 1518 aa12.71□□□□□ -0.38
EPHA4-207ENST00000434266 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
EPHA4-207ENST00000434266 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
EPHA4-207ENST00000434266 POLA1P09884 1462 aaPredicted RBP12.68□□□□□ -0.38
EPHA4-207ENST00000434266 SOGA1O94964 1423 aa12.68□□□□□ -0.38
EPHA4-207ENST00000434266 EEA1Q15075 1411 aa12.68□□□□□ -0.38
EPHA4-207ENST00000434266 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
EPHA4-207ENST00000434266 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
EPHA4-207ENST00000434266 ABCA10Q8WWZ4 1543 aa12.63□□□□□ -0.39
EPHA4-207ENST00000434266 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
EPHA4-207ENST00000434266 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
EPHA4-207ENST00000434266 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
EPHA4-207ENST00000434266 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
EPHA4-207ENST00000434266 FAM9AQ8IZU1 332 aaPredicted RBP12.55□□□□□ -0.4
EPHA4-207ENST00000434266 RUSC2Q8N2Y8 1516 aa12.55□□□□□ -0.4
EPHA4-207ENST00000434266 IGF1RP08069 1367 aa12.55□□□□□ -0.4
EPHA4-207ENST00000434266 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
EPHA4-207ENST00000434266 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
EPHA4-207ENST00000434266 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
EPHA4-207ENST00000434266 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
EPHA4-207ENST00000434266 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
EPHA4-207ENST00000434266 AQRO60306 1485 aaKnown RBP eCLIP12.48□□□□□ -0.41
EPHA4-207ENST00000434266 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
EPHA4-207ENST00000434266 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
EPHA4-207ENST00000434266 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
EPHA4-207ENST00000434266 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
EPHA4-207ENST00000434266 ABCA5Q8WWZ7 1642 aa12.47□□□□□ -0.41
EPHA4-207ENST00000434266 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
EPHA4-207ENST00000434266 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
EPHA4-207ENST00000434266 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
EPHA4-207ENST00000434266 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
EPHA4-207ENST00000434266 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
EPHA4-207ENST00000434266 KIF21BO75037 1637 aa12.41□□□□□ -0.42
EPHA4-207ENST00000434266 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
EPHA4-207ENST00000434266 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
EPHA4-207ENST00000434266 GOLGA3Q08378 1498 aa12.4□□□□□ -0.42
EPHA4-207ENST00000434266 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.42
EPHA4-207ENST00000434266 EIF4G3O43432 1585 aaKnown RBP12.39□□□□□ -0.43
EPHA4-207ENST00000434266 CUL7Q14999 1698 aa12.39□□□□□ -0.43
EPHA4-207ENST00000434266 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
EPHA4-207ENST00000434266 TNIKQ9UKE5 1360 aa12.38□□□□□ -0.43
EPHA4-207ENST00000434266 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
EPHA4-207ENST00000434266 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
EPHA4-207ENST00000434266 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
EPHA4-207ENST00000434266 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
EPHA4-207ENST00000434266 PBRM1Q86U86 1689 aa12.34□□□□□ -0.43
EPHA4-207ENST00000434266 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
EPHA4-207ENST00000434266 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
EPHA4-207ENST00000434266 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
EPHA4-207ENST00000434266 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
EPHA4-207ENST00000434266 GRIN2AQ12879 1464 aa12.29□□□□□ -0.44
EPHA4-207ENST00000434266 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
EPHA4-207ENST00000434266 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
EPHA4-207ENST00000434266 ARHGEF11O15085 1522 aa12.28□□□□□ -0.44
EPHA4-207ENST00000434266 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
EPHA4-207ENST00000434266 NUP160Q12769 1436 aa12.25□□□□□ -0.45
EPHA4-207ENST00000434266 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
EPHA4-207ENST00000434266 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
EPHA4-207ENST00000434266 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
EPHA4-207ENST00000434266 CEP162Q5TB80 1403 aa12.22□□□□□ -0.45
EPHA4-207ENST00000434266 MIER1Q8N108 512 aa12.21□□□□□ -0.45
EPHA4-207ENST00000434266 CLIP1P30622 1438 aa12.2□□□□□ -0.46
EPHA4-207ENST00000434266 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
EPHA4-207ENST00000434266 JPH4Q96JJ6 628 aa12.18□□□□□ -0.46
EPHA4-207ENST00000434266 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
EPHA4-207ENST00000434266 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
EPHA4-207ENST00000434266 IQGAP2Q13576 1575 aa12.16□□□□□ -0.46
EPHA4-207ENST00000434266 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
EPHA4-207ENST00000434266 UGGT2Q9NYU1 1516 aa12.15□□□□□ -0.46
EPHA4-207ENST00000434266 CTTNBP2Q8WZ74 1663 aa12.14□□□□□ -0.47
EPHA4-207ENST00000434266 EFCAB5A4FU69 1503 aa12.14□□□□□ -0.47
EPHA4-207ENST00000434266 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
EPHA4-207ENST00000434266 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
EPHA4-207ENST00000434266 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
EPHA4-207ENST00000434266 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
EPHA4-207ENST00000434266 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
EPHA4-207ENST00000434266 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
EPHA4-207ENST00000434266 CHD1O14646 1710 aa12.12□□□□□ -0.47
EPHA4-207ENST00000434266 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
EPHA4-207ENST00000434266 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
EPHA4-207ENST00000434266 CLASP1Q7Z460 1538 aa12.08□□□□□ -0.48
EPHA4-207ENST00000434266 SAMD9Q5K651 1589 aa12.08□□□□□ -0.48
EPHA4-207ENST00000434266 DISP1Q96F81 1524 aa12.07□□□□□ -0.48
EPHA4-207ENST00000434266 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
EPHA4-207ENST00000434266 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
EPHA4-207ENST00000434266 PRG4Q92954 1404 aaPredicted RBP12.07□□□□□ -0.48
EPHA4-207ENST00000434266 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms