RNA–Protein interactions for RNA: ENST00000434266.1

EPHA4-207, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 617 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-207ENST00000434266 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
EPHA4-207ENST00000434266 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
EPHA4-207ENST00000434266 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
EPHA4-207ENST00000434266 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
EPHA4-207ENST00000434266 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
EPHA4-207ENST00000434266 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.43
EPHA4-207ENST00000434266 FOXD1Q16676 465 aa17.4■□□□□ 0.38
EPHA4-207ENST00000434266 ADRA2BP18089 450 aa16.9■□□□□ 0.3
EPHA4-207ENST00000434266 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
EPHA4-207ENST00000434266 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
EPHA4-207ENST00000434266 MSH5O43196 834 aa15.99■□□□□ 0.15
EPHA4-207ENST00000434266 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
EPHA4-207ENST00000434266 KCNA4P22459 653 aa15.69■□□□□ 0.1
EPHA4-207ENST00000434266 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
EPHA4-207ENST00000434266 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
EPHA4-207ENST00000434266 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
EPHA4-207ENST00000434266 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
EPHA4-207ENST00000434266 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
EPHA4-207ENST00000434266 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
EPHA4-207ENST00000434266 ABCC9O60706 1549 aa15.07■□□□□ 0
EPHA4-207ENST00000434266 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
EPHA4-207ENST00000434266 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
EPHA4-207ENST00000434266 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
EPHA4-207ENST00000434266 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
EPHA4-207ENST00000434266 HOXD11P31277 338 aaPredicted RBP14.84□□□□□ -0.03
EPHA4-207ENST00000434266 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
EPHA4-207ENST00000434266 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
EPHA4-207ENST00000434266 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
EPHA4-207ENST00000434266 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
EPHA4-207ENST00000434266 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
EPHA4-207ENST00000434266 NACADO15069 1562 aa14.61□□□□□ -0.07
EPHA4-207ENST00000434266 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
EPHA4-207ENST00000434266 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
EPHA4-207ENST00000434266 ZBTB22O15209 634 aa14.43□□□□□ -0.1
EPHA4-207ENST00000434266 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
EPHA4-207ENST00000434266 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
EPHA4-207ENST00000434266 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
EPHA4-207ENST00000434266 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
EPHA4-207ENST00000434266 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
EPHA4-207ENST00000434266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
EPHA4-207ENST00000434266 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
EPHA4-207ENST00000434266 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
EPHA4-207ENST00000434266 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
EPHA4-207ENST00000434266 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
EPHA4-207ENST00000434266 BICRAQ9NZM4 1560 aa14.01□□□□□ -0.17
EPHA4-207ENST00000434266 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
EPHA4-207ENST00000434266 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
EPHA4-207ENST00000434266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
EPHA4-207ENST00000434266 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
EPHA4-207ENST00000434266 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
EPHA4-207ENST00000434266 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
EPHA4-207ENST00000434266 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
EPHA4-207ENST00000434266 RSF1Q96T23 1441 aaPredicted RBP13.71□□□□□ -0.22
EPHA4-207ENST00000434266 APLP2Q06481 763 aa13.7□□□□□ -0.22
EPHA4-207ENST00000434266 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
EPHA4-207ENST00000434266 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
EPHA4-207ENST00000434266 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
EPHA4-207ENST00000434266 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
EPHA4-207ENST00000434266 SUPT5HO00267 1087 aaKnown RBP13.63□□□□□ -0.23
EPHA4-207ENST00000434266 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
EPHA4-207ENST00000434266 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
EPHA4-207ENST00000434266 C1QBPQ07021 282 aaKnown RBP13.57□□□□□ -0.24
EPHA4-207ENST00000434266 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
EPHA4-207ENST00000434266 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
EPHA4-207ENST00000434266 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
EPHA4-207ENST00000434266 DNAJC5Q9H3Z4 198 aa13.53□□□□□ -0.24
EPHA4-207ENST00000434266 NCAPD3P42695 1498 aa13.52□□□□□ -0.25
EPHA4-207ENST00000434266 WIZO95785 1651 aa13.48□□□□□ -0.25
EPHA4-207ENST00000434266 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
EPHA4-207ENST00000434266 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
EPHA4-207ENST00000434266 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
EPHA4-207ENST00000434266 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
EPHA4-207ENST00000434266 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
EPHA4-207ENST00000434266 CAPN15O75808 1086 aa13.39□□□□□ -0.27
EPHA4-207ENST00000434266 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
EPHA4-207ENST00000434266 CCDC88BA6NC98 1476 aa13.29□□□□□ -0.28
EPHA4-207ENST00000434266 POLA2Q14181 598 aa13.22□□□□□ -0.29
EPHA4-207ENST00000434266 CUX2O14529 1486 aa13.17□□□□□ -0.3
EPHA4-207ENST00000434266 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
EPHA4-207ENST00000434266 FKBP8Q14318 412 aa13.16□□□□□ -0.3
EPHA4-207ENST00000434266 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
EPHA4-207ENST00000434266 ABCB7O75027 752 aa13.14□□□□□ -0.31
EPHA4-207ENST00000434266 CFTRP13569 1480 aa13.13□□□□□ -0.31
EPHA4-207ENST00000434266 DSG3P32926 999 aa13.12□□□□□ -0.31
EPHA4-207ENST00000434266 FBLN2P98095 1184 aa13.11□□□□□ -0.31
EPHA4-207ENST00000434266 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
EPHA4-207ENST00000434266 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
EPHA4-207ENST00000434266 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
EPHA4-207ENST00000434266 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
EPHA4-207ENST00000434266 PDS5BQ9NTI5 1447 aa13□□□□□ -0.33
EPHA4-207ENST00000434266 NESP48681 1621 aa12.96□□□□□ -0.33
EPHA4-207ENST00000434266 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
EPHA4-207ENST00000434266 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
EPHA4-207ENST00000434266 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
EPHA4-207ENST00000434266 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
EPHA4-207ENST00000434266 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
EPHA4-207ENST00000434266 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
EPHA4-207ENST00000434266 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
EPHA4-207ENST00000434266 CUX1P39880 1505 aa12.79□□□□□ -0.36
EPHA4-207ENST00000434266 THOC2Q8NI27 1593 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms