RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
SRGAP3-203ENST00000433332 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
SRGAP3-203ENST00000433332 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
SRGAP3-203ENST00000433332 MRC2Q9UBG0 1479 aa13.18□□□□□ -0.3
SRGAP3-203ENST00000433332 RAD54L2Q9Y4B4 1467 aa13.17□□□□□ -0.3
SRGAP3-203ENST00000433332 IGF1RP08069 1367 aa13.14□□□□□ -0.31
SRGAP3-203ENST00000433332 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
SRGAP3-203ENST00000433332 WDR62O43379 1518 aa13.12□□□□□ -0.31
SRGAP3-203ENST00000433332 CUL7Q14999 1698 aa13.11□□□□□ -0.31
SRGAP3-203ENST00000433332 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-203ENST00000433332 CLIP1P30622 1438 aa13.1□□□□□ -0.31
SRGAP3-203ENST00000433332 ERCC6Q03468 1493 aa13.08□□□□□ -0.32
SRGAP3-203ENST00000433332 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.32
SRGAP3-203ENST00000433332 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-203ENST00000433332 HAP1P54257 671 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-203ENST00000433332 GAPVD1Q14C86 1478 aa13.05□□□□□ -0.32
SRGAP3-203ENST00000433332 IFT140Q96RY7 1462 aa13.03□□□□□ -0.32
SRGAP3-203ENST00000433332 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
SRGAP3-203ENST00000433332 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-203ENST00000433332 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-203ENST00000433332 PBRM1Q86U86 1689 aa13.01□□□□□ -0.33
SRGAP3-203ENST00000433332 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
SRGAP3-203ENST00000433332 PCGF6Q9BYE7 350 aa13□□□□□ -0.33
SRGAP3-203ENST00000433332 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
SRGAP3-203ENST00000433332 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
SRGAP3-203ENST00000433332 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
SRGAP3-203ENST00000433332 ADAMTS12P58397 1594 aa12.95□□□□□ -0.34
SRGAP3-203ENST00000433332 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
SRGAP3-203ENST00000433332 EIF4G3O43432 1585 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-203ENST00000433332 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.34
SRGAP3-203ENST00000433332 TMEM132AQ24JP5 1023 aa12.93□□□□□ -0.34
SRGAP3-203ENST00000433332 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-203ENST00000433332 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
SRGAP3-203ENST00000433332 EFCAB5A4FU69 1503 aa12.91□□□□□ -0.34
SRGAP3-203ENST00000433332 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
SRGAP3-203ENST00000433332 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-203ENST00000433332 HRCP23327 699 aa12.87□□□□□ -0.35
SRGAP3-203ENST00000433332 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-203ENST00000433332 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
SRGAP3-203ENST00000433332 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-203ENST00000433332 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
SRGAP3-203ENST00000433332 SAMD9Q5K651 1589 aa12.84□□□□□ -0.35
SRGAP3-203ENST00000433332 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
SRGAP3-203ENST00000433332 VSIG10Q8N0Z9 540 aa12.82□□□□□ -0.36
SRGAP3-203ENST00000433332 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
SRGAP3-203ENST00000433332 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-203ENST00000433332 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
SRGAP3-203ENST00000433332 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
SRGAP3-203ENST00000433332 PCF11O94913 1555 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-203ENST00000433332 FHOD3Q2V2M9 1422 aa12.78□□□□□ -0.36
SRGAP3-203ENST00000433332 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
SRGAP3-203ENST00000433332 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.37
SRGAP3-203ENST00000433332 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
SRGAP3-203ENST00000433332 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
SRGAP3-203ENST00000433332 FMN1Q68DA7 1419 aa12.76□□□□□ -0.37
SRGAP3-203ENST00000433332 KIAA0586Q9BVV6 1533 aa12.74□□□□□ -0.37
SRGAP3-203ENST00000433332 UGGT2Q9NYU1 1516 aa12.74□□□□□ -0.37
SRGAP3-203ENST00000433332 CASKIN1Q8WXD9 1431 aa12.74□□□□□ -0.37
SRGAP3-203ENST00000433332 ZBTB22O15209 634 aa12.72□□□□□ -0.37
SRGAP3-203ENST00000433332 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
SRGAP3-203ENST00000433332 CEP170Q5SW79 1584 aa12.71□□□□□ -0.38
SRGAP3-203ENST00000433332 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
SRGAP3-203ENST00000433332 NUP160Q12769 1436 aa12.69□□□□□ -0.38
SRGAP3-203ENST00000433332 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-203ENST00000433332 KIAA0556O60303 1618 aa12.68□□□□□ -0.38
SRGAP3-203ENST00000433332 LRRC9Q6ZRR7 1453 aa12.68□□□□□ -0.38
SRGAP3-203ENST00000433332 KANK4Q5T7N3 995 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-203ENST00000433332 DISP1Q96F81 1524 aa12.65□□□□□ -0.38
SRGAP3-203ENST00000433332 HECW1Q76N89 1606 aa12.65□□□□□ -0.38
SRGAP3-203ENST00000433332 LRRIQ1Q96JM4 1722 aa12.63□□□□□ -0.39
SRGAP3-203ENST00000433332 RRBP1Q9P2E9 1410 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-203ENST00000433332 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
SRGAP3-203ENST00000433332 CHD1O14646 1710 aa12.63□□□□□ -0.39
SRGAP3-203ENST00000433332 FBLN2P98095 1184 aa12.62□□□□□ -0.39
SRGAP3-203ENST00000433332 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
SRGAP3-203ENST00000433332 CARMIL2Q6F5E8 1435 aa12.58□□□□□ -0.4
SRGAP3-203ENST00000433332 EHBP1L1Q8N3D4 1523 aa12.58□□□□□ -0.4
SRGAP3-203ENST00000433332 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
SRGAP3-203ENST00000433332 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
SRGAP3-203ENST00000433332 ZEB1P37275 1124 aaPredicted RBP12.57□□□□□ -0.4
SRGAP3-203ENST00000433332 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
SRGAP3-203ENST00000433332 EPRSP07814 1512 aaKnown RBP12.56□□□□□ -0.4
SRGAP3-203ENST00000433332 MTUS2Q5JR59 1369 aa12.55□□□□□ -0.4
SRGAP3-203ENST00000433332 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-203ENST00000433332 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
SRGAP3-203ENST00000433332 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
SRGAP3-203ENST00000433332 SHROOM2Q13796 1616 aa12.53□□□□□ -0.4
SRGAP3-203ENST00000433332 FKBP8Q14318 412 aa12.53□□□□□ -0.4
SRGAP3-203ENST00000433332 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
SRGAP3-203ENST00000433332 CDK13Q14004 1512 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-203ENST00000433332 NUP153P49790 1475 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-203ENST00000433332 MAGI3Q5TCQ9 1506 aa12.51□□□□□ -0.41
SRGAP3-203ENST00000433332 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
SRGAP3-203ENST00000433332 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
SRGAP3-203ENST00000433332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.49□□□□□ -0.41
SRGAP3-203ENST00000433332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
SRGAP3-203ENST00000433332 CCER1Q8TC90 406 aaPredicted RBP12.49□□□□□ -0.41
SRGAP3-203ENST00000433332 CLASP1Q7Z460 1538 aa12.49□□□□□ -0.41
SRGAP3-203ENST00000433332 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
SRGAP3-203ENST00000433332 ABCA8O94911 1581 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms