RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 RAPGEF2Q9Y4G8 1499 aa9.49□□□□□ -0.89
LINC00309-201ENST00000431020 BIVM-ERCC5R4GMW8 1640 aa9.48□□□□□ -0.89
LINC00309-201ENST00000431020 FHAD1B1AJZ9 1412 aa9.47□□□□□ -0.89
LINC00309-201ENST00000431020 KCNA4P22459 653 aa9.47□□□□□ -0.89
LINC00309-201ENST00000431020 SYNJ2O15056 1496 aa9.47□□□□□ -0.89
LINC00309-201ENST00000431020 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.89
LINC00309-201ENST00000431020 SENP3Q9H4L4 574 aaPredicted RBP9.46□□□□□ -0.9
LINC00309-201ENST00000431020 GRIN2AQ12879 1464 aa9.45□□□□□ -0.9
LINC00309-201ENST00000431020 PRG4Q92954 1404 aaPredicted RBP9.44□□□□□ -0.9
LINC00309-201ENST00000431020 MAGI1Q96QZ7 1491 aaPredicted RBP9.43□□□□□ -0.9
LINC00309-201ENST00000431020 CHD1O14646 1710 aa9.43□□□□□ -0.9
LINC00309-201ENST00000431020 PBRM1Q86U86 1689 aa9.4□□□□□ -0.9
LINC00309-201ENST00000431020 ABCA5Q8WWZ7 1642 aa9.4□□□□□ -0.91
LINC00309-201ENST00000431020 APLP2Q06481 763 aa9.39□□□□□ -0.91
LINC00309-201ENST00000431020 FHOD3Q2V2M9 1422 aa9.38□□□□□ -0.91
LINC00309-201ENST00000431020 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
LINC00309-201ENST00000431020 ERCC6L2Q5T890 1561 aa9.38□□□□□ -0.91
LINC00309-201ENST00000431020 ERICH3Q5RHP9 1530 aa9.37□□□□□ -0.91
LINC00309-201ENST00000431020 PTPRGP23470 1445 aa9.37□□□□□ -0.91
LINC00309-201ENST00000431020 ADAMTS12P58397 1594 aa9.36□□□□□ -0.91
LINC00309-201ENST00000431020 CEP170Q5SW79 1584 aa9.35□□□□□ -0.91
LINC00309-201ENST00000431020 ARHGEF11O15085 1522 aa9.35□□□□□ -0.91
LINC00309-201ENST00000431020 ZNF777Q9ULD5 760 aaPredicted RBP9.35□□□□□ -0.91
LINC00309-201ENST00000431020 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
LINC00309-201ENST00000431020 FAM69CQ0P6D2 419 aa9.34□□□□□ -0.91
LINC00309-201ENST00000431020 CARMIL2Q6F5E8 1435 aa9.34□□□□□ -0.91
LINC00309-201ENST00000431020 WDR97A6NE52 1622 aa9.34□□□□□ -0.91
LINC00309-201ENST00000431020 ITGAEP38570 1179 aa9.33□□□□□ -0.92
LINC00309-201ENST00000431020 EEA1Q15075 1411 aa9.33□□□□□ -0.92
LINC00309-201ENST00000431020 PRXQ9BXM0 1461 aa9.33□□□□□ -0.92
LINC00309-201ENST00000431020 CLIP1P30622 1438 aa9.32□□□□□ -0.92
LINC00309-201ENST00000431020 KIAA0586Q9BVV6 1533 aa9.31□□□□□ -0.92
LINC00309-201ENST00000431020 NUP160Q12769 1436 aa9.3□□□□□ -0.92
LINC00309-201ENST00000431020 PLB1Q6P1J6 1458 aa9.29□□□□□ -0.92
LINC00309-201ENST00000431020 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
LINC00309-201ENST00000431020 CEP162Q5TB80 1403 aa9.28□□□□□ -0.92
LINC00309-201ENST00000431020 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
LINC00309-201ENST00000431020 RIMBP3CA6NJZ7 1639 aa9.27□□□□□ -0.93
LINC00309-201ENST00000431020 RIMBP3BA6NNM3 1639 aa9.27□□□□□ -0.93
LINC00309-201ENST00000431020 RIMBP3Q9UFD9 1639 aa9.27□□□□□ -0.93
LINC00309-201ENST00000431020 IQGAP2Q13576 1575 aa9.27□□□□□ -0.93
LINC00309-201ENST00000431020 PLEKHD1A6NEE1 506 aa9.27□□□□□ -0.93
LINC00309-201ENST00000431020 CUL7Q14999 1698 aa9.27□□□□□ -0.93
LINC00309-201ENST00000431020 TNIKQ9UKE5 1360 aa9.27□□□□□ -0.93
LINC00309-201ENST00000431020 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.93
LINC00309-201ENST00000431020 ADRA2BP18089 450 aa9.21□□□□□ -0.93
LINC00309-201ENST00000431020 MYT1Q01538 1121 aa9.21□□□□□ -0.93
LINC00309-201ENST00000431020 FAM50AQ14320 339 aaKnown RBP9.21□□□□□ -0.94
LINC00309-201ENST00000431020 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
LINC00309-201ENST00000431020 DISP1Q96F81 1524 aa9.2□□□□□ -0.94
LINC00309-201ENST00000431020 ARHGAP35Q9NRY4 1499 aa9.2□□□□□ -0.94
LINC00309-201ENST00000431020 CLASP1Q7Z460 1538 aa9.2□□□□□ -0.94
LINC00309-201ENST00000431020 UACAQ9BZF9 1416 aa9.19□□□□□ -0.94
LINC00309-201ENST00000431020 MTUS2Q5JR59 1369 aa9.19□□□□□ -0.94
LINC00309-201ENST00000431020 PELP1Q8IZL8 1130 aaKnown RBP9.19□□□□□ -0.94
LINC00309-201ENST00000431020 MLECQ14165 292 aa9.18□□□□□ -0.94
LINC00309-201ENST00000431020 CHIC2Q9UKJ5 165 aa9.17□□□□□ -0.94
LINC00309-201ENST00000431020 CDK13Q14004 1512 aaKnown RBP9.17□□□□□ -0.94
LINC00309-201ENST00000431020 RAPGEF3O95398 923 aa9.16□□□□□ -0.94
LINC00309-201ENST00000431020 KIF21BO75037 1637 aa9.16□□□□□ -0.94
LINC00309-201ENST00000431020 ARID4BQ4LE39 1312 aaPredicted RBP9.15□□□□□ -0.94
LINC00309-201ENST00000431020 ASXL2Q76L83 1435 aa9.14□□□□□ -0.95
LINC00309-201ENST00000431020 CTTNBP2Q8WZ74 1663 aa9.14□□□□□ -0.95
LINC00309-201ENST00000431020 KIAA0556O60303 1618 aa9.14□□□□□ -0.95
LINC00309-201ENST00000431020 ZNF644Q9H582 1327 aaPredicted RBP9.14□□□□□ -0.95
LINC00309-201ENST00000431020 CFDP1Q9UEE9 299 aaPredicted RBP9.13□□□□□ -0.95
LINC00309-201ENST00000431020 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
LINC00309-201ENST00000431020 HNRNPMP52272 730 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00309-201ENST00000431020 TSPOAP1O95153 1857 aa9.12□□□□□ -0.95
LINC00309-201ENST00000431020 UGGT2Q9NYU1 1516 aa9.11□□□□□ -0.95
LINC00309-201ENST00000431020 AFAP1Q8N556 730 aa9.11□□□□□ -0.95
LINC00309-201ENST00000431020 DAXXQ9UER7 740 aaPredicted RBP9.11□□□□□ -0.95
LINC00309-201ENST00000431020 ATP10BO94823 1461 aa9.11□□□□□ -0.95
LINC00309-201ENST00000431020 NUP153P49790 1475 aaKnown RBP9.08□□□□□ -0.96
LINC00309-201ENST00000431020 SLC4A1APQ9BWU0 796 aaKnown RBP9.08□□□□□ -0.96
LINC00309-201ENST00000431020 ABCC2Q92887 1545 aa9.07□□□□□ -0.96
LINC00309-201ENST00000431020 ADCY10Q96PN6 1610 aa9.07□□□□□ -0.96
LINC00309-201ENST00000431020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00309-201ENST00000431020 CD109Q6YHK3 1445 aa9.06□□□□□ -0.96
LINC00309-201ENST00000431020 VPS8Q8N3P4 1428 aa9.06□□□□□ -0.96
LINC00309-201ENST00000431020 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
LINC00309-201ENST00000431020 EPRSP07814 1512 aaKnown RBP9.05□□□□□ -0.96
LINC00309-201ENST00000431020 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
LINC00309-201ENST00000431020 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
LINC00309-201ENST00000431020 RRP7BPQ9NSQ0 103 aa9.05□□□□□ -0.96
LINC00309-201ENST00000431020 PCF11O94913 1555 aaKnown RBP9.05□□□□□ -0.96
LINC00309-201ENST00000431020 GGT6Q6P531 493 aa9.03□□□□□ -0.96
LINC00309-201ENST00000431020 PCGF6Q9BYE7 350 aa9.03□□□□□ -0.96
LINC00309-201ENST00000431020 RAPGEF6Q8TEU7 1601 aa9.03□□□□□ -0.96
LINC00309-201ENST00000431020 EFCAB5A4FU69 1503 aa9.02□□□□□ -0.97
LINC00309-201ENST00000431020 WDR7Q9Y4E6 1490 aa9.02□□□□□ -0.97
LINC00309-201ENST00000431020 CASKIN1Q8WXD9 1431 aa9.01□□□□□ -0.97
LINC00309-201ENST00000431020 TSPY4P0CV99 314 aa9.01□□□□□ -0.97
LINC00309-201ENST00000431020 TSPY10P0CW01 314 aa9.01□□□□□ -0.97
LINC00309-201ENST00000431020 AMER1Q5JTC6 1135 aaPredicted RBP9□□□□□ -0.97
LINC00309-201ENST00000431020 SAMD9Q5K651 1589 aa9□□□□□ -0.97
LINC00309-201ENST00000431020 PPP6R1Q9UPN7 881 aa9□□□□□ -0.97
LINC00309-201ENST00000431020 ZCCHC11Q5TAX3 1644 aaKnown RBP8.99□□□□□ -0.97
LINC00309-201ENST00000431020 ESF1Q9H501 851 aaKnown RBP8.99□□□□□ -0.97
LINC00309-201ENST00000431020 KDM5BQ9UGL1 1544 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms