RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
ABCA8-202ENST00000428549 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
ABCA8-202ENST00000428549 CUX1P39880 1505 aa13.79□□□□□ -0.2
ABCA8-202ENST00000428549 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
ABCA8-202ENST00000428549 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
ABCA8-202ENST00000428549 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
ABCA8-202ENST00000428549 SOGA1O94964 1423 aa13.71□□□□□ -0.21
ABCA8-202ENST00000428549 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.22
ABCA8-202ENST00000428549 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
ABCA8-202ENST00000428549 EEA1Q15075 1411 aa13.67□□□□□ -0.22
ABCA8-202ENST00000428549 TARBP1Q13395 1621 aaKnown RBP13.67□□□□□ -0.22
ABCA8-202ENST00000428549 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
ABCA8-202ENST00000428549 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
ABCA8-202ENST00000428549 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
ABCA8-202ENST00000428549 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.23
ABCA8-202ENST00000428549 PDIA4P13667 645 aaKnown RBP13.6□□□□□ -0.23
ABCA8-202ENST00000428549 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
ABCA8-202ENST00000428549 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
ABCA8-202ENST00000428549 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
ABCA8-202ENST00000428549 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
ABCA8-202ENST00000428549 HRCP23327 699 aa13.56□□□□□ -0.24
ABCA8-202ENST00000428549 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
ABCA8-202ENST00000428549 DNAJC5Q9H3Z4 198 aa13.55□□□□□ -0.24
ABCA8-202ENST00000428549 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
ABCA8-202ENST00000428549 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
ABCA8-202ENST00000428549 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
ABCA8-202ENST00000428549 GRIN2BQ13224 1484 aa13.52□□□□□ -0.24
ABCA8-202ENST00000428549 ZBTB22O15209 634 aa13.52□□□□□ -0.25
ABCA8-202ENST00000428549 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
ABCA8-202ENST00000428549 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
ABCA8-202ENST00000428549 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
ABCA8-202ENST00000428549 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
ABCA8-202ENST00000428549 KIF21BO75037 1637 aa13.48□□□□□ -0.25
ABCA8-202ENST00000428549 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
ABCA8-202ENST00000428549 FBLN2P98095 1184 aa13.48□□□□□ -0.25
ABCA8-202ENST00000428549 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
ABCA8-202ENST00000428549 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
ABCA8-202ENST00000428549 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.25
ABCA8-202ENST00000428549 CDK11AQ9UQ88 783 aaPredicted RBP13.45□□□□□ -0.26
ABCA8-202ENST00000428549 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
ABCA8-202ENST00000428549 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
ABCA8-202ENST00000428549 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
ABCA8-202ENST00000428549 ERICH3Q5RHP9 1530 aa13.43□□□□□ -0.26
ABCA8-202ENST00000428549 IGF1RP08069 1367 aa13.42□□□□□ -0.26
ABCA8-202ENST00000428549 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
ABCA8-202ENST00000428549 CDK11BP21127 795 aaKnown RBP13.42□□□□□ -0.26
ABCA8-202ENST00000428549 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
ABCA8-202ENST00000428549 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
ABCA8-202ENST00000428549 CUL7Q14999 1698 aa13.41□□□□□ -0.26
ABCA8-202ENST00000428549 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
ABCA8-202ENST00000428549 FKBP8Q14318 412 aa13.4□□□□□ -0.26
ABCA8-202ENST00000428549 CHD1O14646 1710 aa13.4□□□□□ -0.26
ABCA8-202ENST00000428549 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
ABCA8-202ENST00000428549 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
ABCA8-202ENST00000428549 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
ABCA8-202ENST00000428549 ADAMTS12P58397 1594 aa13.35□□□□□ -0.27
ABCA8-202ENST00000428549 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
ABCA8-202ENST00000428549 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
ABCA8-202ENST00000428549 GRIN2AQ12879 1464 aa13.33□□□□□ -0.27
ABCA8-202ENST00000428549 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
ABCA8-202ENST00000428549 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
ABCA8-202ENST00000428549 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
ABCA8-202ENST00000428549 BRD2P25440 801 aaKnown RBP13.3□□□□□ -0.28
ABCA8-202ENST00000428549 PDE4CQ08493 712 aa13.28□□□□□ -0.28
ABCA8-202ENST00000428549 NUP160Q12769 1436 aa13.28□□□□□ -0.28
ABCA8-202ENST00000428549 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
ABCA8-202ENST00000428549 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
ABCA8-202ENST00000428549 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
ABCA8-202ENST00000428549 HSP90B1P14625 803 aaKnown RBP13.24□□□□□ -0.29
ABCA8-202ENST00000428549 NEFLP07196 543 aa13.23□□□□□ -0.29
ABCA8-202ENST00000428549 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
ABCA8-202ENST00000428549 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
ABCA8-202ENST00000428549 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
ABCA8-202ENST00000428549 JPH4Q96JJ6 628 aa13.2□□□□□ -0.3
ABCA8-202ENST00000428549 RIMBP3CA6NJZ7 1639 aa13.19□□□□□ -0.3
ABCA8-202ENST00000428549 RIMBP3BA6NNM3 1639 aa13.19□□□□□ -0.3
ABCA8-202ENST00000428549 RIMBP3Q9UFD9 1639 aa13.19□□□□□ -0.3
ABCA8-202ENST00000428549 KIAA0586Q9BVV6 1533 aa13.19□□□□□ -0.3
ABCA8-202ENST00000428549 CLIP1P30622 1438 aa13.18□□□□□ -0.3
ABCA8-202ENST00000428549 CCDC9Q9Y3X0 531 aaKnown RBP13.17□□□□□ -0.3
ABCA8-202ENST00000428549 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
ABCA8-202ENST00000428549 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
ABCA8-202ENST00000428549 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
ABCA8-202ENST00000428549 IGSF3O75054 1194 aa13.13□□□□□ -0.31
ABCA8-202ENST00000428549 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
ABCA8-202ENST00000428549 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
ABCA8-202ENST00000428549 IQGAP2Q13576 1575 aa13.12□□□□□ -0.31
ABCA8-202ENST00000428549 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
ABCA8-202ENST00000428549 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
ABCA8-202ENST00000428549 ERCC6L2Q5T890 1561 aa13.08□□□□□ -0.31
ABCA8-202ENST00000428549 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
ABCA8-202ENST00000428549 NBR1Q14596 966 aa13.07□□□□□ -0.32
ABCA8-202ENST00000428549 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
ABCA8-202ENST00000428549 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
ABCA8-202ENST00000428549 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
ABCA8-202ENST00000428549 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
ABCA8-202ENST00000428549 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
ABCA8-202ENST00000428549 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.32
ABCA8-202ENST00000428549 DISP1Q96F81 1524 aa13□□□□□ -0.33
ABCA8-202ENST00000428549 PTPRGP23470 1445 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms