RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 ABCC8Q09428 1581 aa5.42□□□□□ -1.54
RGPD1-203ENST00000428128 MAPK8IP2Q13387 824 aaPredicted RBP5.42□□□□□ -1.54
RGPD1-203ENST00000428128 NPM2Q86SE8 214 aaKnown RBP5.41□□□□□ -1.54
RGPD1-203ENST00000428128 C14orf37Q86TY3 774 aa5.4□□□□□ -1.54
RGPD1-203ENST00000428128 PBRM1Q86U86 1689 aa5.4□□□□□ -1.54
RGPD1-203ENST00000428128 CHD1O14646 1710 aa5.39□□□□□ -1.55
RGPD1-203ENST00000428128 CNKSR2Q8WXI2 1034 aa5.39□□□□□ -1.55
RGPD1-203ENST00000428128 GLI2P10070 1586 aa5.38□□□□□ -1.55
RGPD1-203ENST00000428128 HRCP23327 699 aa5.37□□□□□ -1.55
RGPD1-203ENST00000428128 RNF216Q9NWF9 866 aaPredicted RBP5.37□□□□□ -1.55
RGPD1-203ENST00000428128 ABCA5Q8WWZ7 1642 aa5.36□□□□□ -1.55
RGPD1-203ENST00000428128 CFTRP13569 1480 aa5.36□□□□□ -1.55
RGPD1-203ENST00000428128 PKD2Q13563 968 aa5.35□□□□□ -1.55
RGPD1-203ENST00000428128 TRIM26Q12899 539 aaPredicted RBP5.35□□□□□ -1.55
RGPD1-203ENST00000428128 DNMBPQ6XZF7 1577 aa5.34□□□□□ -1.55
RGPD1-203ENST00000428128 TOP2AP11388 1531 aaKnown RBP5.34□□□□□ -1.55
RGPD1-203ENST00000428128 PROM2Q8N271 834 aa5.33□□□□□ -1.56
RGPD1-203ENST00000428128 MAPKBP1O60336 1514 aa5.33□□□□□ -1.56
RGPD1-203ENST00000428128 KDM6BO15054 1643 aa5.33□□□□□ -1.56
RGPD1-203ENST00000428128 EIF4G3O43432 1585 aaKnown RBP5.33□□□□□ -1.56
RGPD1-203ENST00000428128 ERCC6L2Q5T890 1561 aa5.33□□□□□ -1.56
RGPD1-203ENST00000428128 BIVM-ERCC5R4GMW8 1640 aa5.32□□□□□ -1.56
RGPD1-203ENST00000428128 PPRC1Q5VV67 1664 aaKnown RBP5.31□□□□□ -1.56
RGPD1-203ENST00000428128 IFT140Q96RY7 1462 aa5.31□□□□□ -1.56
RGPD1-203ENST00000428128 PDS5BQ9NTI5 1447 aa5.3□□□□□ -1.56
RGPD1-203ENST00000428128 NPM1P06748 294 aaKnown RBP eCLIP5.3□□□□□ -1.56
RGPD1-203ENST00000428128 TRIM41Q8WV44 630 aa5.27□□□□□ -1.57
RGPD1-203ENST00000428128 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.27□□□□□ -1.57
RGPD1-203ENST00000428128 UBTFP17480 764 aaKnown RBP5.26□□□□□ -1.57
RGPD1-203ENST00000428128 ARHGEF11O15085 1522 aa5.25□□□□□ -1.57
RGPD1-203ENST00000428128 MAP3K4Q9Y6R4 1608 aa5.25□□□□□ -1.57
RGPD1-203ENST00000428128 TSHZ2Q9NRE2 1034 aa5.24□□□□□ -1.57
RGPD1-203ENST00000428128 MAGI1Q96QZ7 1491 aaPredicted RBP5.24□□□□□ -1.57
RGPD1-203ENST00000428128 SYNJ1O43426 1573 aa5.24□□□□□ -1.57
RGPD1-203ENST00000428128 ILDR1Q86SU0 546 aaPredicted RBP5.23□□□□□ -1.57
RGPD1-203ENST00000428128 PAXIP1Q6ZW49 1069 aaPredicted RBP5.22□□□□□ -1.57
RGPD1-203ENST00000428128 KIAA0586Q9BVV6 1533 aa5.22□□□□□ -1.57
RGPD1-203ENST00000428128 SLC4A2P04920 1241 aa5.22□□□□□ -1.57
RGPD1-203ENST00000428128 NBR1Q14596 966 aa5.22□□□□□ -1.57
RGPD1-203ENST00000428128 IFNLR1Q8IU57 520 aaPredicted RBP5.21□□□□□ -1.57
RGPD1-203ENST00000428128 URB2Q14146 1524 aaKnown RBP5.21□□□□□ -1.58
RGPD1-203ENST00000428128 LOC105371045A0A1W2PR82 267 aa5.2□□□□□ -1.58
RGPD1-203ENST00000428128 MYCNP04198 464 aaPredicted RBP5.2□□□□□ -1.58
RGPD1-203ENST00000428128 IQSEC2Q5JU85 1478 aa5.2□□□□□ -1.58
RGPD1-203ENST00000428128 CEP164Q9UPV0 1460 aa5.2□□□□□ -1.58
RGPD1-203ENST00000428128 VASPP50552 380 aaPredicted RBP5.19□□□□□ -1.58
RGPD1-203ENST00000428128 ADAMTS12P58397 1594 aa5.19□□□□□ -1.58
RGPD1-203ENST00000428128 SPRYD3Q8NCJ5 442 aa5.18□□□□□ -1.58
RGPD1-203ENST00000428128 CADPSQ9ULU8 1353 aa5.18□□□□□ -1.58
RGPD1-203ENST00000428128 EIF5BO60841 1220 aaKnown RBP5.18□□□□□ -1.58
RGPD1-203ENST00000428128 DIP2BQ9P265 1576 aa5.17□□□□□ -1.58
RGPD1-203ENST00000428128 ARAP1Q96P48 1450 aa5.17□□□□□ -1.58
RGPD1-203ENST00000428128 SUPT5HO00267 1087 aaKnown RBP5.17□□□□□ -1.58
RGPD1-203ENST00000428128 DCAF8L2P0C7V8 631 aa5.16□□□□□ -1.58
RGPD1-203ENST00000428128 PABPN1Q86U42 306 aaKnown RBP eCLIP5.16□□□□□ -1.58
RGPD1-203ENST00000428128 BRPF1P55201 1214 aaPredicted RBP5.16□□□□□ -1.58
RGPD1-203ENST00000428128 CFAP43Q8NDM7 1665 aa5.15□□□□□ -1.58
RGPD1-203ENST00000428128 ERICH3Q5RHP9 1530 aa5.15□□□□□ -1.58
RGPD1-203ENST00000428128 UHRF1BP1LA0JNW5 1464 aa5.15□□□□□ -1.59
RGPD1-203ENST00000428128 RUSC2Q8N2Y8 1516 aa5.15□□□□□ -1.59
RGPD1-203ENST00000428128 KDM5BQ9UGL1 1544 aa5.15□□□□□ -1.59
RGPD1-203ENST00000428128 REREQ9P2R6 1566 aa5.15□□□□□ -1.59
RGPD1-203ENST00000428128 CUL7Q14999 1698 aa5.14□□□□□ -1.59
RGPD1-203ENST00000428128 BCORL1Q5H9F3 1711 aa5.14□□□□□ -1.59
RGPD1-203ENST00000428128 ADAMTSL3P82987 1691 aa5.13□□□□□ -1.59
RGPD1-203ENST00000428128 NUP160Q12769 1436 aa5.13□□□□□ -1.59
RGPD1-203ENST00000428128 CFAP44Q96MT7 982 aa5.12□□□□□ -1.59
RGPD1-203ENST00000428128 CCDC9Q9Y3X0 531 aaKnown RBP5.12□□□□□ -1.59
RGPD1-203ENST00000428128 TOPBP1Q92547 1522 aa5.12□□□□□ -1.59
RGPD1-203ENST00000428128 ZMYND15Q9H091 742 aa5.11□□□□□ -1.59
RGPD1-203ENST00000428128 TOP2BQ02880 1626 aa5.1□□□□□ -1.59
RGPD1-203ENST00000428128 MROH2BQ7Z745 1585 aa5.1□□□□□ -1.59
RGPD1-203ENST00000428128 ABCA10Q8WWZ4 1543 aa5.1□□□□□ -1.59
RGPD1-203ENST00000428128 ERCC6Q03468 1493 aa5.1□□□□□ -1.59
RGPD1-203ENST00000428128 FANCD2Q9BXW9 1451 aa5.1□□□□□ -1.59
RGPD1-203ENST00000428128 FER1L4A9Z1Z3 1794 aa5.09□□□□□ -1.59
RGPD1-203ENST00000428128 FAM135AQ9P2D6 1515 aa5.09□□□□□ -1.59
RGPD1-203ENST00000428128 DSG3P32926 999 aa5.09□□□□□ -1.6
RGPD1-203ENST00000428128 PUS7Q96PZ0 661 aaKnown RBP5.09□□□□□ -1.6
RGPD1-203ENST00000428128 MROH2AA6NES4 1674 aa5.08□□□□□ -1.6
RGPD1-203ENST00000428128 WIZO95785 1651 aa5.08□□□□□ -1.6
RGPD1-203ENST00000428128 RSPH6AQ9H0K4 717 aa5.07□□□□□ -1.6
RGPD1-203ENST00000428128 ZNF608Q9ULD9 1512 aaPredicted RBP5.06□□□□□ -1.6
RGPD1-203ENST00000428128 ZNF142P52746 1687 aaPredicted RBP5.06□□□□□ -1.6
RGPD1-203ENST00000428128 SYNJ2O15056 1496 aa5.06□□□□□ -1.6
RGPD1-203ENST00000428128 RGS22Q8NE09 1264 aa5.06□□□□□ -1.6
RGPD1-203ENST00000428128 HMGB1P09429 215 aaKnown RBP5.06□□□□□ -1.6
RGPD1-203ENST00000428128 CFAP74Q9C0B2 1584 aa5.05□□□□□ -1.6
RGPD1-203ENST00000428128 ZMYM4Q5VZL5 1548 aa5.05□□□□□ -1.6
RGPD1-203ENST00000428128 IGSF3O75054 1194 aa5.05□□□□□ -1.6
RGPD1-203ENST00000428128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.05□□□□□ -1.6
RGPD1-203ENST00000428128 NECTIN2Q92692 538 aa5.05□□□□□ -1.6
RGPD1-203ENST00000428128 C1orf115Q9H7X2 142 aa5.05□□□□□ -1.6
RGPD1-203ENST00000428128 ADCY10Q96PN6 1610 aa5.04□□□□□ -1.6
RGPD1-203ENST00000428128 CEP170Q5SW79 1584 aa5.04□□□□□ -1.6
RGPD1-203ENST00000428128 SOCS7O14512 581 aa5.03□□□□□ -1.6
RGPD1-203ENST00000428128 ARAP3Q8WWN8 1544 aa5.02□□□□□ -1.61
RGPD1-203ENST00000428128 DCAF8L1A6NGE4 600 aa5.02□□□□□ -1.61
RGPD1-203ENST00000428128 TRAIPQ9BWF2 469 aa5.02□□□□□ -1.61
RGPD1-203ENST00000428128 CDK11AQ9UQ88 783 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms