RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 SIN3AQ96ST3 1273 aa21.25■□□□□ 0.99
CNTN4-206ENST00000427741 PPP1R15AO75807 674 aaPredicted RBP21.23■□□□□ 0.99
CNTN4-206ENST00000427741 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
CNTN4-206ENST00000427741 PHLDB1Q86UU1 1377 aa21.22■□□□□ 0.99
CNTN4-206ENST00000427741 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
CNTN4-206ENST00000427741 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
CNTN4-206ENST00000427741 CFTRP13569 1480 aa21.2■□□□□ 0.98
CNTN4-206ENST00000427741 IGF1RP08069 1367 aa21.18■□□□□ 0.98
CNTN4-206ENST00000427741 TIMELESSQ9UNS1 1208 aa21.13■□□□□ 0.97
CNTN4-206ENST00000427741 RBM19Q9Y4C8 960 aaKnown RBP21.13■□□□□ 0.97
CNTN4-206ENST00000427741 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
CNTN4-206ENST00000427741 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
CNTN4-206ENST00000427741 CCER2I3L3R5 266 aa21.11■□□□□ 0.97
CNTN4-206ENST00000427741 TRIM52Q96A61 297 aa21.09■□□□□ 0.97
CNTN4-206ENST00000427741 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.96
CNTN4-206ENST00000427741 NEFLP07196 543 aa21.08■□□□□ 0.96
CNTN4-206ENST00000427741 CFAP43Q8NDM7 1665 aa21.07■□□□□ 0.96
CNTN4-206ENST00000427741 ANP32CO43423 234 aa21.05■□□□□ 0.96
CNTN4-206ENST00000427741 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
CNTN4-206ENST00000427741 PCF11O94913 1555 aaKnown RBP21.04■□□□□ 0.96
CNTN4-206ENST00000427741 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
CNTN4-206ENST00000427741 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
CNTN4-206ENST00000427741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.96■□□□□ 0.95
CNTN4-206ENST00000427741 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
CNTN4-206ENST00000427741 MSH5O43196 834 aa20.96■□□□□ 0.95
CNTN4-206ENST00000427741 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
CNTN4-206ENST00000427741 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
CNTN4-206ENST00000427741 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
CNTN4-206ENST00000427741 TONSLQ96HA7 1378 aa20.91■□□□□ 0.94
CNTN4-206ENST00000427741 IRX6P78412 446 aaPredicted RBP20.89■□□□□ 0.93
CNTN4-206ENST00000427741 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
CNTN4-206ENST00000427741 CCDC18Q5T9S5 1454 aa20.87■□□□□ 0.93
CNTN4-206ENST00000427741 FGD6Q6ZV73 1430 aa20.86■□□□□ 0.93
CNTN4-206ENST00000427741 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
CNTN4-206ENST00000427741 AQRO60306 1485 aaKnown RBP eCLIP20.85■□□□□ 0.93
CNTN4-206ENST00000427741 PTPRKQ15262 1439 aa20.84■□□□□ 0.93
CNTN4-206ENST00000427741 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
CNTN4-206ENST00000427741 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.92
CNTN4-206ENST00000427741 HFM1A2PYH4 1435 aa20.82■□□□□ 0.92
CNTN4-206ENST00000427741 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
CNTN4-206ENST00000427741 PTPN23Q9H3S7 1636 aa20.8■□□□□ 0.92
CNTN4-206ENST00000427741 HNRNPUQ00839 825 aaKnown RBP eCLIP20.79■□□□□ 0.92
CNTN4-206ENST00000427741 ERICH6Q7L0X2 663 aa20.76■□□□□ 0.91
CNTN4-206ENST00000427741 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
CNTN4-206ENST00000427741 NAIPQ13075 1403 aa20.75■□□□□ 0.91
CNTN4-206ENST00000427741 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
CNTN4-206ENST00000427741 FMN1Q68DA7 1419 aa20.72■□□□□ 0.91
CNTN4-206ENST00000427741 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
CNTN4-206ENST00000427741 WASHC2AQ641Q2 1341 aa20.72■□□□□ 0.91
CNTN4-206ENST00000427741 MTUS2Q5JR59 1369 aa20.71■□□□□ 0.91
CNTN4-206ENST00000427741 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
CNTN4-206ENST00000427741 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
CNTN4-206ENST00000427741 CTTNBP2Q8WZ74 1663 aa20.7■□□□□ 0.9
CNTN4-206ENST00000427741 HSPA5P11021 654 aaKnown RBP20.67■□□□□ 0.9
CNTN4-206ENST00000427741 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
CNTN4-206ENST00000427741 NCOA2Q15596 1464 aa20.67■□□□□ 0.9
CNTN4-206ENST00000427741 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
CNTN4-206ENST00000427741 MYOM3Q5VTT5 1437 aa20.66■□□□□ 0.9
CNTN4-206ENST00000427741 LRRIQ1Q96JM4 1722 aa20.66■□□□□ 0.9
CNTN4-206ENST00000427741 CUL7Q14999 1698 aa20.66■□□□□ 0.9
CNTN4-206ENST00000427741 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
CNTN4-206ENST00000427741 DNMBPQ6XZF7 1577 aa20.64■□□□□ 0.89
CNTN4-206ENST00000427741 ERICH6BQ5W0A0 696 aa20.63■□□□□ 0.89
CNTN4-206ENST00000427741 CCDC184Q52MB2 194 aa20.63■□□□□ 0.89
CNTN4-206ENST00000427741 DENND4BO75064 1496 aaPredicted RBP20.62■□□□□ 0.89
CNTN4-206ENST00000427741 PPP4R2Q9NY27 417 aa20.6■□□□□ 0.89
CNTN4-206ENST00000427741 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
CNTN4-206ENST00000427741 TOPBP1Q92547 1522 aa20.59■□□□□ 0.89
CNTN4-206ENST00000427741 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
CNTN4-206ENST00000427741 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
CNTN4-206ENST00000427741 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.88
CNTN4-206ENST00000427741 EIF4G2P78344 907 aaKnown RBP eCLIP20.57■□□□□ 0.88
CNTN4-206ENST00000427741 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
CNTN4-206ENST00000427741 EHBP1L1Q8N3D4 1523 aa20.55■□□□□ 0.88
CNTN4-206ENST00000427741 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
CNTN4-206ENST00000427741 HECW1Q76N89 1606 aa20.54■□□□□ 0.88
CNTN4-206ENST00000427741 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
CNTN4-206ENST00000427741 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
CNTN4-206ENST00000427741 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
CNTN4-206ENST00000427741 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
CNTN4-206ENST00000427741 CHIC2Q9UKJ5 165 aa20.52■□□□□ 0.88
CNTN4-206ENST00000427741 GCC2Q8IWJ2 1684 aa20.52■□□□□ 0.88
CNTN4-206ENST00000427741 MAGI3Q5TCQ9 1506 aa20.52■□□□□ 0.87
CNTN4-206ENST00000427741 KDM6BO15054 1643 aa20.51■□□□□ 0.87
CNTN4-206ENST00000427741 DEKP35659 375 aaKnown RBP20.51■□□□□ 0.87
CNTN4-206ENST00000427741 NCOA1Q15788 1441 aa20.51■□□□□ 0.87
CNTN4-206ENST00000427741 B4GALNT3Q6L9W6 998 aa20.5■□□□□ 0.87
CNTN4-206ENST00000427741 CCDC7Q96M83 1385 aa20.5■□□□□ 0.87
CNTN4-206ENST00000427741 FAM9BQ8IZU0 186 aa20.5■□□□□ 0.87
CNTN4-206ENST00000427741 TCOF1Q13428 1488 aaKnown RBP20.49■□□□□ 0.87
CNTN4-206ENST00000427741 ZBED9Q6R2W3 1325 aa20.49■□□□□ 0.87
CNTN4-206ENST00000427741 L3MBTL2Q969R5 705 aa20.49■□□□□ 0.87
CNTN4-206ENST00000427741 NBR1Q14596 966 aa20.48■□□□□ 0.87
CNTN4-206ENST00000427741 MRS2Q9HD23 443 aa20.47■□□□□ 0.87
CNTN4-206ENST00000427741 MPHOSPH9Q99550 1183 aa20.46■□□□□ 0.87
CNTN4-206ENST00000427741 AKNAQ7Z591 1439 aa20.46■□□□□ 0.87
CNTN4-206ENST00000427741 FOXD1Q16676 465 aa20.43■□□□□ 0.86
CNTN4-206ENST00000427741 NESP48681 1621 aa20.42■□□□□ 0.86
CNTN4-206ENST00000427741 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
CNTN4-206ENST00000427741 ABCA5Q8WWZ7 1642 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms