RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
CNTN4-206ENST00000427741 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
CNTN4-206ENST00000427741 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.65
CNTN4-206ENST00000427741 ZCCHC6Q5VYS8 1495 aaKnown RBP25.14■■□□□ 1.61
CNTN4-206ENST00000427741 HRCP23327 699 aa25.02■■□□□ 1.6
CNTN4-206ENST00000427741 MYO15BQ96JP2 1530 aa25.02■■□□□ 1.6
CNTN4-206ENST00000427741 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
CNTN4-206ENST00000427741 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
CNTN4-206ENST00000427741 PCGF6Q9BYE7 350 aa24.68■■□□□ 1.54
CNTN4-206ENST00000427741 PPARGC1BQ86YN6 1023 aaKnown RBP24.67■■□□□ 1.54
CNTN4-206ENST00000427741 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
CNTN4-206ENST00000427741 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
CNTN4-206ENST00000427741 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
CNTN4-206ENST00000427741 TRIM26Q12899 539 aaPredicted RBP24.05■■□□□ 1.44
CNTN4-206ENST00000427741 ABCC9O60706 1549 aa23.81■■□□□ 1.4
CNTN4-206ENST00000427741 ZEB1P37275 1124 aaPredicted RBP23.7■■□□□ 1.38
CNTN4-206ENST00000427741 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
CNTN4-206ENST00000427741 SCAF1Q9H7N4 1312 aaKnown RBP23.58■■□□□ 1.37
CNTN4-206ENST00000427741 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.36
CNTN4-206ENST00000427741 TRIM41Q8WV44 630 aa23.58■■□□□ 1.36
CNTN4-206ENST00000427741 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
CNTN4-206ENST00000427741 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
CNTN4-206ENST00000427741 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
CNTN4-206ENST00000427741 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.33
CNTN4-206ENST00000427741 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
CNTN4-206ENST00000427741 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
CNTN4-206ENST00000427741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
CNTN4-206ENST00000427741 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
CNTN4-206ENST00000427741 ACIN1Q9UKV3 1341 aaKnown RBP22.98■■□□□ 1.27
CNTN4-206ENST00000427741 WIZO95785 1651 aa22.97■■□□□ 1.27
CNTN4-206ENST00000427741 CCER1Q8TC90 406 aaPredicted RBP22.96■■□□□ 1.27
CNTN4-206ENST00000427741 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
CNTN4-206ENST00000427741 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
CNTN4-206ENST00000427741 NACADO15069 1562 aa22.88■■□□□ 1.25
CNTN4-206ENST00000427741 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
CNTN4-206ENST00000427741 DIEXFQ68CQ4 756 aaKnown RBP22.8■■□□□ 1.24
CNTN4-206ENST00000427741 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
CNTN4-206ENST00000427741 TTBK1Q5TCY1 1321 aaPredicted RBP22.71■■□□□ 1.23
CNTN4-206ENST00000427741 CENPBP07199 599 aaPredicted RBP22.69■■□□□ 1.22
CNTN4-206ENST00000427741 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
CNTN4-206ENST00000427741 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
CNTN4-206ENST00000427741 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
CNTN4-206ENST00000427741 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
CNTN4-206ENST00000427741 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
CNTN4-206ENST00000427741 SOGA1O94964 1423 aa22.55■■□□□ 1.2
CNTN4-206ENST00000427741 YTHDC1Q96MU7 727 aaKnown RBP22.54■■□□□ 1.2
CNTN4-206ENST00000427741 MYT1Q01538 1121 aa22.5■■□□□ 1.19
CNTN4-206ENST00000427741 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
CNTN4-206ENST00000427741 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
CNTN4-206ENST00000427741 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
CNTN4-206ENST00000427741 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
CNTN4-206ENST00000427741 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
CNTN4-206ENST00000427741 EEA1Q15075 1411 aa22.42■■□□□ 1.18
CNTN4-206ENST00000427741 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
CNTN4-206ENST00000427741 GOLGA3Q08378 1498 aa22.33■■□□□ 1.17
CNTN4-206ENST00000427741 MIER1Q8N108 512 aa22.28■■□□□ 1.16
CNTN4-206ENST00000427741 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
CNTN4-206ENST00000427741 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
CNTN4-206ENST00000427741 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
CNTN4-206ENST00000427741 KIF21BO75037 1637 aa22.13■■□□□ 1.13
CNTN4-206ENST00000427741 CLIP1P30622 1438 aa22.11■■□□□ 1.13
CNTN4-206ENST00000427741 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.13
CNTN4-206ENST00000427741 SYNJ1O43426 1573 aa22.08■■□□□ 1.12
CNTN4-206ENST00000427741 BAZ1BQ9UIG0 1483 aaKnown RBP21.99■■□□□ 1.11
CNTN4-206ENST00000427741 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
CNTN4-206ENST00000427741 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
CNTN4-206ENST00000427741 APLP2Q06481 763 aa21.95■■□□□ 1.1
CNTN4-206ENST00000427741 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
CNTN4-206ENST00000427741 DHX57Q6P158 1386 aaKnown RBP21.86■■□□□ 1.09
CNTN4-206ENST00000427741 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
CNTN4-206ENST00000427741 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
CNTN4-206ENST00000427741 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
CNTN4-206ENST00000427741 SUPT16HQ9Y5B9 1047 aaKnown RBP21.78■■□□□ 1.08
CNTN4-206ENST00000427741 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
CNTN4-206ENST00000427741 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
CNTN4-206ENST00000427741 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
CNTN4-206ENST00000427741 KANK4Q5T7N3 995 aaPredicted RBP21.71■■□□□ 1.07
CNTN4-206ENST00000427741 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
CNTN4-206ENST00000427741 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
CNTN4-206ENST00000427741 RRBP1Q9P2E9 1410 aaKnown RBP21.65■■□□□ 1.06
CNTN4-206ENST00000427741 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
CNTN4-206ENST00000427741 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
CNTN4-206ENST00000427741 CUX2O14529 1486 aa21.62■■□□□ 1.05
CNTN4-206ENST00000427741 BCANQ96GW7 911 aa21.53■■□□□ 1.04
CNTN4-206ENST00000427741 ANP32EQ9BTT0 268 aa21.53■■□□□ 1.04
CNTN4-206ENST00000427741 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
CNTN4-206ENST00000427741 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
CNTN4-206ENST00000427741 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
CNTN4-206ENST00000427741 MAPKBP1O60336 1514 aa21.44■■□□□ 1.02
CNTN4-206ENST00000427741 CUX1P39880 1505 aa21.43■■□□□ 1.02
CNTN4-206ENST00000427741 ITGAEP38570 1179 aa21.43■■□□□ 1.02
CNTN4-206ENST00000427741 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
CNTN4-206ENST00000427741 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
CNTN4-206ENST00000427741 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
CNTN4-206ENST00000427741 WDR97A6NE52 1622 aa21.3■■□□□ 1
CNTN4-206ENST00000427741 FKBP8Q14318 412 aa21.3■■□□□ 1
CNTN4-206ENST00000427741 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
CNTN4-206ENST00000427741 TIAM1Q13009 1591 aa21.28■■□□□ 1
CNTN4-206ENST00000427741 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
CNTN4-206ENST00000427741 MAP3K1Q13233 1512 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms