RNA–Protein interactions for RNA: ENST00000423160.2

SCN4B-203, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 2

Gene SCN4B, Length 3,969 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-203ENST00000423160 SIN3AQ96ST3 1273 aa15.64■□□□□ 0.09
SCN4B-203ENST00000423160 PHLDB1Q86UU1 1377 aa15.64■□□□□ 0.09
SCN4B-203ENST00000423160 HMGXB3Q12766 1538 aa15.64■□□□□ 0.09
SCN4B-203ENST00000423160 LRRC9Q6ZRR7 1453 aa15.63■□□□□ 0.09
SCN4B-203ENST00000423160 CFTRP13569 1480 aa15.62■□□□□ 0.09
SCN4B-203ENST00000423160 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
SCN4B-203ENST00000423160 IGF1RP08069 1367 aa15.6■□□□□ 0.09
SCN4B-203ENST00000423160 ERICH6Q7L0X2 663 aa15.59■□□□□ 0.09
SCN4B-203ENST00000423160 CFAP43Q8NDM7 1665 aa15.58■□□□□ 0.08
SCN4B-203ENST00000423160 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
SCN4B-203ENST00000423160 RBM19Q9Y4C8 960 aaKnown RBP15.55■□□□□ 0.08
SCN4B-203ENST00000423160 PCF11O94913 1555 aaKnown RBP15.54■□□□□ 0.08
SCN4B-203ENST00000423160 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
SCN4B-203ENST00000423160 CCER2I3L3R5 266 aa15.53■□□□□ 0.08
SCN4B-203ENST00000423160 TRIM52Q96A61 297 aa15.52■□□□□ 0.08
SCN4B-203ENST00000423160 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.07
SCN4B-203ENST00000423160 NEFLP07196 543 aa15.51■□□□□ 0.07
SCN4B-203ENST00000423160 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
SCN4B-203ENST00000423160 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
SCN4B-203ENST00000423160 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
SCN4B-203ENST00000423160 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
SCN4B-203ENST00000423160 ANP32CO43423 234 aa15.45■□□□□ 0.06
SCN4B-203ENST00000423160 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
SCN4B-203ENST00000423160 MSH5O43196 834 aa15.44■□□□□ 0.06
SCN4B-203ENST00000423160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCN4B-203ENST00000423160 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
SCN4B-203ENST00000423160 P3H3Q8IVL6 736 aa15.41■□□□□ 0.06
SCN4B-203ENST00000423160 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
SCN4B-203ENST00000423160 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
SCN4B-203ENST00000423160 PTPRKQ15262 1439 aa15.39■□□□□ 0.05
SCN4B-203ENST00000423160 CCDC18Q5T9S5 1454 aa15.37■□□□□ 0.05
SCN4B-203ENST00000423160 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
SCN4B-203ENST00000423160 FGD6Q6ZV73 1430 aa15.36■□□□□ 0.05
SCN4B-203ENST00000423160 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCN4B-203ENST00000423160 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
SCN4B-203ENST00000423160 TONSLQ96HA7 1378 aa15.35■□□□□ 0.05
SCN4B-203ENST00000423160 HFM1A2PYH4 1435 aa15.34■□□□□ 0.05
SCN4B-203ENST00000423160 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
SCN4B-203ENST00000423160 EFCAB5A4FU69 1503 aa15.34■□□□□ 0.05
SCN4B-203ENST00000423160 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
SCN4B-203ENST00000423160 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.04
SCN4B-203ENST00000423160 LRRIQ1Q96JM4 1722 aa15.32■□□□□ 0.04
SCN4B-203ENST00000423160 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
SCN4B-203ENST00000423160 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
SCN4B-203ENST00000423160 NAIPQ13075 1403 aa15.3■□□□□ 0.04
SCN4B-203ENST00000423160 CTTNBP2Q8WZ74 1663 aa15.29■□□□□ 0.04
SCN4B-203ENST00000423160 IRX6P78412 446 aaPredicted RBP15.29■□□□□ 0.04
SCN4B-203ENST00000423160 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCN4B-203ENST00000423160 WASHC2AQ641Q2 1341 aa15.27■□□□□ 0.03
SCN4B-203ENST00000423160 DENND4BO75064 1496 aaPredicted RBP15.26■□□□□ 0.03
SCN4B-203ENST00000423160 RAD54L2Q9Y4B4 1467 aa15.26■□□□□ 0.03
SCN4B-203ENST00000423160 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
SCN4B-203ENST00000423160 CC2D2AQ9P2K1 1620 aa15.24■□□□□ 0.03
SCN4B-203ENST00000423160 NCOA2Q15596 1464 aa15.23■□□□□ 0.03
SCN4B-203ENST00000423160 CCDC184Q52MB2 194 aa15.23■□□□□ 0.03
SCN4B-203ENST00000423160 CUL7Q14999 1698 aa15.23■□□□□ 0.03
SCN4B-203ENST00000423160 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
SCN4B-203ENST00000423160 MYOM3Q5VTT5 1437 aa15.21■□□□□ 0.03
SCN4B-203ENST00000423160 HSPA5P11021 654 aaKnown RBP15.21■□□□□ 0.02
SCN4B-203ENST00000423160 CDK11AQ9UQ88 783 aaPredicted RBP15.21■□□□□ 0.02
SCN4B-203ENST00000423160 SAMD9Q5K651 1589 aa15.21■□□□□ 0.02
SCN4B-203ENST00000423160 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.02
SCN4B-203ENST00000423160 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.02
SCN4B-203ENST00000423160 MTUS2Q5JR59 1369 aa15.2■□□□□ 0.02
SCN4B-203ENST00000423160 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
SCN4B-203ENST00000423160 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
SCN4B-203ENST00000423160 KDM6BO15054 1643 aa15.18■□□□□ 0.02
SCN4B-203ENST00000423160 HECW1Q76N89 1606 aa15.18■□□□□ 0.02
SCN4B-203ENST00000423160 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
SCN4B-203ENST00000423160 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
SCN4B-203ENST00000423160 CNTLNQ9NXG0 1405 aa15.17■□□□□ 0.02
SCN4B-203ENST00000423160 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
SCN4B-203ENST00000423160 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
SCN4B-203ENST00000423160 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
SCN4B-203ENST00000423160 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
SCN4B-203ENST00000423160 ERICH6BQ5W0A0 696 aa15.16■□□□□ 0.02
SCN4B-203ENST00000423160 C11orf95C9JLR9 678 aaPredicted RBP15.16■□□□□ 0.02
SCN4B-203ENST00000423160 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
SCN4B-203ENST00000423160 PPP4R2Q9NY27 417 aa15.15■□□□□ 0.02
SCN4B-203ENST00000423160 EHBP1L1Q8N3D4 1523 aa15.14■□□□□ 0.01
SCN4B-203ENST00000423160 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
SCN4B-203ENST00000423160 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
SCN4B-203ENST00000423160 NCOA1Q15788 1441 aa15.12■□□□□ 0.01
SCN4B-203ENST00000423160 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
SCN4B-203ENST00000423160 PRKRIP1Q9H875 184 aaPredicted RBP15.11■□□□□ 0.01
SCN4B-203ENST00000423160 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
SCN4B-203ENST00000423160 EIF4G2P78344 907 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCN4B-203ENST00000423160 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
SCN4B-203ENST00000423160 B4GALNT3Q6L9W6 998 aa15.09■□□□□ 0.01
SCN4B-203ENST00000423160 ZBED9Q6R2W3 1325 aa15.08■□□□□ 0.01
SCN4B-203ENST00000423160 AKNAQ7Z591 1439 aa15.07■□□□□ 0
SCN4B-203ENST00000423160 L3MBTL2Q969R5 705 aa15.07■□□□□ 0
SCN4B-203ENST00000423160 CHIC2Q9UKJ5 165 aa15.07■□□□□ 0
SCN4B-203ENST00000423160 ABCA5Q8WWZ7 1642 aa15.07■□□□□ 0
SCN4B-203ENST00000423160 FAM9BQ8IZU0 186 aa15.06■□□□□ 0
SCN4B-203ENST00000423160 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
SCN4B-203ENST00000423160 NESP48681 1621 aa15.05■□□□□ -0
SCN4B-203ENST00000423160 SPATA31E1Q6ZUB1 1445 aa15.04■□□□□ -0
SCN4B-203ENST00000423160 MPHOSPH9Q99550 1183 aa15.04■□□□□ -0
SCN4B-203ENST00000423160 KIF21AQ7Z4S6 1674 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms