RNA–Protein interactions for RNA: ENST00000423160.2

SCN4B-203, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 2

Gene SCN4B, Length 3,969 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-203ENST00000423160 NISCHQ9Y2I1 1504 aa21.82■■□□□ 1.08
SCN4B-203ENST00000423160 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
SCN4B-203ENST00000423160 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
SCN4B-203ENST00000423160 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
SCN4B-203ENST00000423160 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.56
SCN4B-203ENST00000423160 HRCP23327 699 aa18.45■□□□□ 0.54
SCN4B-203ENST00000423160 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
SCN4B-203ENST00000423160 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
SCN4B-203ENST00000423160 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
SCN4B-203ENST00000423160 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.49
SCN4B-203ENST00000423160 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
SCN4B-203ENST00000423160 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
SCN4B-203ENST00000423160 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
SCN4B-203ENST00000423160 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
SCN4B-203ENST00000423160 ABCC9O60706 1549 aa17.59■□□□□ 0.41
SCN4B-203ENST00000423160 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
SCN4B-203ENST00000423160 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
SCN4B-203ENST00000423160 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
SCN4B-203ENST00000423160 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
SCN4B-203ENST00000423160 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
SCN4B-203ENST00000423160 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
SCN4B-203ENST00000423160 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
SCN4B-203ENST00000423160 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
SCN4B-203ENST00000423160 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.34
SCN4B-203ENST00000423160 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
SCN4B-203ENST00000423160 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
SCN4B-203ENST00000423160 WIZO95785 1651 aa16.97■□□□□ 0.31
SCN4B-203ENST00000423160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
SCN4B-203ENST00000423160 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.3
SCN4B-203ENST00000423160 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
SCN4B-203ENST00000423160 NEUROD1Q13562 356 aa16.92■□□□□ 0.3
SCN4B-203ENST00000423160 CCER1Q8TC90 406 aaPredicted RBP16.87■□□□□ 0.29
SCN4B-203ENST00000423160 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
SCN4B-203ENST00000423160 NACADO15069 1562 aa16.84■□□□□ 0.29
SCN4B-203ENST00000423160 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
SCN4B-203ENST00000423160 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
SCN4B-203ENST00000423160 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
SCN4B-203ENST00000423160 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
SCN4B-203ENST00000423160 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
SCN4B-203ENST00000423160 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
SCN4B-203ENST00000423160 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
SCN4B-203ENST00000423160 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
SCN4B-203ENST00000423160 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
SCN4B-203ENST00000423160 SOGA1O94964 1423 aa16.63■□□□□ 0.25
SCN4B-203ENST00000423160 TNIKQ9UKE5 1360 aa16.61■□□□□ 0.25
SCN4B-203ENST00000423160 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
SCN4B-203ENST00000423160 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
SCN4B-203ENST00000423160 ZNF316A6NFI3 1004 aaPredicted RBP16.55■□□□□ 0.24
SCN4B-203ENST00000423160 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
SCN4B-203ENST00000423160 YTHDC1Q96MU7 727 aaKnown RBP16.52■□□□□ 0.24
SCN4B-203ENST00000423160 EEA1Q15075 1411 aa16.49■□□□□ 0.23
SCN4B-203ENST00000423160 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
SCN4B-203ENST00000423160 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
SCN4B-203ENST00000423160 MIER1Q8N108 512 aa16.43■□□□□ 0.22
SCN4B-203ENST00000423160 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
SCN4B-203ENST00000423160 MYT1Q01538 1121 aa16.41■□□□□ 0.22
SCN4B-203ENST00000423160 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
SCN4B-203ENST00000423160 KIF21BO75037 1637 aa16.33■□□□□ 0.21
SCN4B-203ENST00000423160 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
SCN4B-203ENST00000423160 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
SCN4B-203ENST00000423160 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
SCN4B-203ENST00000423160 CLIP1P30622 1438 aa16.28■□□□□ 0.2
SCN4B-203ENST00000423160 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.19
SCN4B-203ENST00000423160 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.19
SCN4B-203ENST00000423160 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
SCN4B-203ENST00000423160 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
SCN4B-203ENST00000423160 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
SCN4B-203ENST00000423160 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
SCN4B-203ENST00000423160 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
SCN4B-203ENST00000423160 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
SCN4B-203ENST00000423160 APLP2Q06481 763 aa16.05■□□□□ 0.16
SCN4B-203ENST00000423160 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCN4B-203ENST00000423160 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
SCN4B-203ENST00000423160 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
SCN4B-203ENST00000423160 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
SCN4B-203ENST00000423160 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
SCN4B-203ENST00000423160 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
SCN4B-203ENST00000423160 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
SCN4B-203ENST00000423160 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
SCN4B-203ENST00000423160 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
SCN4B-203ENST00000423160 RRBP1Q9P2E9 1410 aaKnown RBP15.97■□□□□ 0.15
SCN4B-203ENST00000423160 CUX2O14529 1486 aa15.96■□□□□ 0.15
SCN4B-203ENST00000423160 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
SCN4B-203ENST00000423160 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
SCN4B-203ENST00000423160 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
SCN4B-203ENST00000423160 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
SCN4B-203ENST00000423160 ARHGAP35Q9NRY4 1499 aa15.82■□□□□ 0.12
SCN4B-203ENST00000423160 CUX1P39880 1505 aa15.82■□□□□ 0.12
SCN4B-203ENST00000423160 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
SCN4B-203ENST00000423160 ANP32EQ9BTT0 268 aa15.75■□□□□ 0.11
SCN4B-203ENST00000423160 BCANQ96GW7 911 aa15.74■□□□□ 0.11
SCN4B-203ENST00000423160 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
SCN4B-203ENST00000423160 ITGAEP38570 1179 aa15.73■□□□□ 0.11
SCN4B-203ENST00000423160 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
SCN4B-203ENST00000423160 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
SCN4B-203ENST00000423160 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
SCN4B-203ENST00000423160 SETD5Q9C0A6 1442 aa15.67■□□□□ 0.1
SCN4B-203ENST00000423160 PPP1R15AO75807 674 aaPredicted RBP15.66■□□□□ 0.1
SCN4B-203ENST00000423160 DDX10Q13206 875 aaKnown RBP15.65■□□□□ 0.1
SCN4B-203ENST00000423160 FKBP8Q14318 412 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms