RNA–Protein interactions for RNA: ENST00000421621.2

YKT6-202, Transcript of YKT6 v-SNARE homolog, humanhuman

TSL 1 (best)

Gene YKT6, Length 2,463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YKT6-202ENST00000421621 IGF1RP08069 1367 aa22.62■■□□□ 1.21
YKT6-202ENST00000421621 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
YKT6-202ENST00000421621 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
YKT6-202ENST00000421621 LRRC9Q6ZRR7 1453 aa22.58■■□□□ 1.2
YKT6-202ENST00000421621 TIMELESSQ9UNS1 1208 aa22.56■■□□□ 1.2
YKT6-202ENST00000421621 TSHZ2Q9NRE2 1034 aa22.54■■□□□ 1.2
YKT6-202ENST00000421621 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
YKT6-202ENST00000421621 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
YKT6-202ENST00000421621 PHLDB1Q86UU1 1377 aa22.51■■□□□ 1.19
YKT6-202ENST00000421621 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
YKT6-202ENST00000421621 KCNH8Q96L42 1107 aa22.48■■□□□ 1.19
YKT6-202ENST00000421621 P3H3Q8IVL6 736 aa22.47■■□□□ 1.19
YKT6-202ENST00000421621 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
YKT6-202ENST00000421621 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
YKT6-202ENST00000421621 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
YKT6-202ENST00000421621 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
YKT6-202ENST00000421621 DDX10Q13206 875 aaKnown RBP22.43■■□□□ 1.18
YKT6-202ENST00000421621 FAM50AQ14320 339 aaKnown RBP22.42■■□□□ 1.18
YKT6-202ENST00000421621 POLA1P09884 1462 aaPredicted RBP22.42■■□□□ 1.18
YKT6-202ENST00000421621 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
YKT6-202ENST00000421621 URB2Q14146 1524 aaKnown RBP22.42■■□□□ 1.18
YKT6-202ENST00000421621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
YKT6-202ENST00000421621 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
YKT6-202ENST00000421621 PDS5BQ9NTI5 1447 aa22.4■■□□□ 1.18
YKT6-202ENST00000421621 CCER2I3L3R5 266 aa22.38■■□□□ 1.17
YKT6-202ENST00000421621 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
YKT6-202ENST00000421621 PCF11O94913 1555 aaKnown RBP22.37■■□□□ 1.17
YKT6-202ENST00000421621 ATP1B4Q9UN42 357 aaPredicted RBP22.35■■□□□ 1.17
YKT6-202ENST00000421621 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
YKT6-202ENST00000421621 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
YKT6-202ENST00000421621 ANP32EQ9BTT0 268 aa22.34■■□□□ 1.17
YKT6-202ENST00000421621 FYCO1Q9BQS8 1478 aa22.34■■□□□ 1.17
YKT6-202ENST00000421621 FKBP8Q14318 412 aa22.33■■□□□ 1.16
YKT6-202ENST00000421621 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.16
YKT6-202ENST00000421621 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
YKT6-202ENST00000421621 CASKIN1Q8WXD9 1431 aa22.3■■□□□ 1.16
YKT6-202ENST00000421621 ANP32CO43423 234 aa22.3■■□□□ 1.16
YKT6-202ENST00000421621 NEFLP07196 543 aa22.29■■□□□ 1.16
YKT6-202ENST00000421621 BCANQ96GW7 911 aa22.25■■□□□ 1.15
YKT6-202ENST00000421621 FHOD3Q2V2M9 1422 aa22.25■■□□□ 1.15
YKT6-202ENST00000421621 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
YKT6-202ENST00000421621 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
YKT6-202ENST00000421621 FGD6Q6ZV73 1430 aa22.21■■□□□ 1.15
YKT6-202ENST00000421621 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
YKT6-202ENST00000421621 FMN1Q68DA7 1419 aa22.19■■□□□ 1.14
YKT6-202ENST00000421621 UACAQ9BZF9 1416 aa22.18■■□□□ 1.14
YKT6-202ENST00000421621 HFM1A2PYH4 1435 aa22.17■■□□□ 1.14
YKT6-202ENST00000421621 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
YKT6-202ENST00000421621 HIRIP3Q9BW71 556 aaPredicted RBP22.16■■□□□ 1.14
YKT6-202ENST00000421621 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
YKT6-202ENST00000421621 TRIM52Q96A61 297 aa22.15■■□□□ 1.14
YKT6-202ENST00000421621 CUL7Q14999 1698 aa22.14■■□□□ 1.14
YKT6-202ENST00000421621 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
YKT6-202ENST00000421621 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
YKT6-202ENST00000421621 MTUS2Q5JR59 1369 aa22.1■■□□□ 1.13
YKT6-202ENST00000421621 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
YKT6-202ENST00000421621 RBM19Q9Y4C8 960 aaKnown RBP22.09■■□□□ 1.13
YKT6-202ENST00000421621 PTPN23Q9H3S7 1636 aa22.09■■□□□ 1.13
YKT6-202ENST00000421621 CTTNBP2Q8WZ74 1663 aa22.08■■□□□ 1.13
YKT6-202ENST00000421621 FBLN2P98095 1184 aa22.07■■□□□ 1.12
YKT6-202ENST00000421621 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
YKT6-202ENST00000421621 NAIPQ13075 1403 aa22.06■■□□□ 1.12
YKT6-202ENST00000421621 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
YKT6-202ENST00000421621 ARID3CA6NKF2 412 aa22.05■■□□□ 1.12
YKT6-202ENST00000421621 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
YKT6-202ENST00000421621 MYOM3Q5VTT5 1437 aa22.04■■□□□ 1.12
YKT6-202ENST00000421621 NCOA2Q15596 1464 aa22.01■■□□□ 1.11
YKT6-202ENST00000421621 THOC2Q8NI27 1593 aaKnown RBP22■■□□□ 1.11
YKT6-202ENST00000421621 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
YKT6-202ENST00000421621 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
YKT6-202ENST00000421621 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
YKT6-202ENST00000421621 TARBP1Q13395 1621 aaKnown RBP21.96■■□□□ 1.11
YKT6-202ENST00000421621 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
YKT6-202ENST00000421621 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
YKT6-202ENST00000421621 HNRNPUQ00839 825 aaKnown RBP eCLIP21.93■■□□□ 1.1
YKT6-202ENST00000421621 ABCA5Q8WWZ7 1642 aa21.92■■□□□ 1.1
YKT6-202ENST00000421621 ERICH6BQ5W0A0 696 aa21.91■■□□□ 1.1
YKT6-202ENST00000421621 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
YKT6-202ENST00000421621 UGGT2Q9NYU1 1516 aa21.9■■□□□ 1.1
YKT6-202ENST00000421621 AKNAQ7Z591 1439 aa21.89■■□□□ 1.09
YKT6-202ENST00000421621 WASHC2AQ641Q2 1341 aa21.88■■□□□ 1.09
YKT6-202ENST00000421621 LRRIQ1Q96JM4 1722 aa21.88■■□□□ 1.09
YKT6-202ENST00000421621 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
YKT6-202ENST00000421621 TCOF1Q13428 1488 aaKnown RBP21.87■■□□□ 1.09
YKT6-202ENST00000421621 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.09
YKT6-202ENST00000421621 CDK11AQ9UQ88 783 aaPredicted RBP21.85■■□□□ 1.09
YKT6-202ENST00000421621 HECW1Q76N89 1606 aa21.85■■□□□ 1.09
YKT6-202ENST00000421621 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
YKT6-202ENST00000421621 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
YKT6-202ENST00000421621 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.08
YKT6-202ENST00000421621 CNTLNQ9NXG0 1405 aa21.82■■□□□ 1.08
YKT6-202ENST00000421621 DENND4BO75064 1496 aaPredicted RBP21.81■■□□□ 1.08
YKT6-202ENST00000421621 WDR62O43379 1518 aa21.8■■□□□ 1.08
YKT6-202ENST00000421621 RRP7BPQ9NSQ0 103 aa21.8■■□□□ 1.08
YKT6-202ENST00000421621 IFT140Q96RY7 1462 aa21.79■■□□□ 1.08
YKT6-202ENST00000421621 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
YKT6-202ENST00000421621 MIA2Q96PC5 1412 aa21.77■■□□□ 1.08
YKT6-202ENST00000421621 PBRM1Q86U86 1689 aa21.76■■□□□ 1.07
YKT6-202ENST00000421621 MSH5O43196 834 aa21.76■■□□□ 1.07
YKT6-202ENST00000421621 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms