RNA–Protein interactions for RNA: ENST00000421077.1

AL441943.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL441943.2, Length 2,321 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL441943.2-201ENST00000421077 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
AL441943.2-201ENST00000421077 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
AL441943.2-201ENST00000421077 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
AL441943.2-201ENST00000421077 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.08
AL441943.2-201ENST00000421077 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.07
AL441943.2-201ENST00000421077 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.07
AL441943.2-201ENST00000421077 URB2Q14146 1524 aaKnown RBP15.51■□□□□ 0.07
AL441943.2-201ENST00000421077 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
AL441943.2-201ENST00000421077 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
AL441943.2-201ENST00000421077 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
AL441943.2-201ENST00000421077 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
AL441943.2-201ENST00000421077 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
AL441943.2-201ENST00000421077 RBM19Q9Y4C8 960 aaKnown RBP15.42■□□□□ 0.06
AL441943.2-201ENST00000421077 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
AL441943.2-201ENST00000421077 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
AL441943.2-201ENST00000421077 ERICH6BQ5W0A0 696 aa15.35■□□□□ 0.05
AL441943.2-201ENST00000421077 FANCIQ9NVI1 1328 aa15.34■□□□□ 0.05
AL441943.2-201ENST00000421077 NEFLP07196 543 aa15.33■□□□□ 0.04
AL441943.2-201ENST00000421077 FHOD3Q2V2M9 1422 aa15.32■□□□□ 0.04
AL441943.2-201ENST00000421077 ATP1B4Q9UN42 357 aaPredicted RBP15.32■□□□□ 0.04
AL441943.2-201ENST00000421077 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
AL441943.2-201ENST00000421077 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
AL441943.2-201ENST00000421077 CUL7Q14999 1698 aa15.29■□□□□ 0.04
AL441943.2-201ENST00000421077 ITGAEP38570 1179 aa15.28■□□□□ 0.04
AL441943.2-201ENST00000421077 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
AL441943.2-201ENST00000421077 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.04
AL441943.2-201ENST00000421077 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
AL441943.2-201ENST00000421077 TIAM1Q13009 1591 aa15.27■□□□□ 0.03
AL441943.2-201ENST00000421077 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.03
AL441943.2-201ENST00000421077 FKBP8Q14318 412 aa15.24■□□□□ 0.03
AL441943.2-201ENST00000421077 RRBP1Q9P2E9 1410 aaKnown RBP15.24■□□□□ 0.03
AL441943.2-201ENST00000421077 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.03
AL441943.2-201ENST00000421077 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.02
AL441943.2-201ENST00000421077 DEKP35659 375 aaKnown RBP15.2■□□□□ 0.02
AL441943.2-201ENST00000421077 PHLDB1Q86UU1 1377 aa15.19■□□□□ 0.02
AL441943.2-201ENST00000421077 MSH5O43196 834 aa15.19■□□□□ 0.02
AL441943.2-201ENST00000421077 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
AL441943.2-201ENST00000421077 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
AL441943.2-201ENST00000421077 BCANQ96GW7 911 aa15.18■□□□□ 0.02
AL441943.2-201ENST00000421077 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
AL441943.2-201ENST00000421077 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
AL441943.2-201ENST00000421077 CFAP43Q8NDM7 1665 aa15.17■□□□□ 0.02
AL441943.2-201ENST00000421077 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
AL441943.2-201ENST00000421077 EFCAB5A4FU69 1503 aa15.15■□□□□ 0.02
AL441943.2-201ENST00000421077 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
AL441943.2-201ENST00000421077 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
AL441943.2-201ENST00000421077 LRRIQ1Q96JM4 1722 aa15.14■□□□□ 0.01
AL441943.2-201ENST00000421077 CDK11AQ9UQ88 783 aaPredicted RBP15.13■□□□□ 0.01
AL441943.2-201ENST00000421077 FAM50AQ14320 339 aaKnown RBP15.12■□□□□ 0.01
AL441943.2-201ENST00000421077 UBE2Q2Q8WVN8 375 aa15.12■□□□□ 0.01
AL441943.2-201ENST00000421077 CASKIN1Q8WXD9 1431 aa15.12■□□□□ 0.01
AL441943.2-201ENST00000421077 FYCO1Q9BQS8 1478 aa15.12■□□□□ 0.01
AL441943.2-201ENST00000421077 ANO8Q9HCE9 1232 aaPredicted RBP15.12■□□□□ 0.01
AL441943.2-201ENST00000421077 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
AL441943.2-201ENST00000421077 SAMD9Q5K651 1589 aa15.12■□□□□ 0.01
AL441943.2-201ENST00000421077 ADAMTS12P58397 1594 aa15.08■□□□□ 0.01
AL441943.2-201ENST00000421077 WDR62O43379 1518 aa15.08■□□□□ 0
AL441943.2-201ENST00000421077 FMN1Q68DA7 1419 aa15.07■□□□□ 0
AL441943.2-201ENST00000421077 ARID3CA6NKF2 412 aa15.07■□□□□ 0
AL441943.2-201ENST00000421077 ERCC6Q03468 1493 aa15.07■□□□□ 0
AL441943.2-201ENST00000421077 RAB3GAP2Q9H2M9 1393 aa15.06■□□□□ 0
AL441943.2-201ENST00000421077 GRIN2BQ13224 1484 aa15.05■□□□□ -0
AL441943.2-201ENST00000421077 IFT140Q96RY7 1462 aa15.03■□□□□ -0
AL441943.2-201ENST00000421077 IQGAP2Q13576 1575 aa15.02□□□□□ -0.01
AL441943.2-201ENST00000421077 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
AL441943.2-201ENST00000421077 MTUS2Q5JR59 1369 aa15.01□□□□□ -0.01
AL441943.2-201ENST00000421077 MAGI3Q5TCQ9 1506 aa15□□□□□ -0.01
AL441943.2-201ENST00000421077 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
AL441943.2-201ENST00000421077 SETD5Q9C0A6 1442 aa14.97□□□□□ -0.01
AL441943.2-201ENST00000421077 MAPKBP1O60336 1514 aa14.96□□□□□ -0.01
AL441943.2-201ENST00000421077 FGD6Q6ZV73 1430 aa14.96□□□□□ -0.01
AL441943.2-201ENST00000421077 CCER2I3L3R5 266 aa14.96□□□□□ -0.01
AL441943.2-201ENST00000421077 FBLN2P98095 1184 aa14.95□□□□□ -0.02
AL441943.2-201ENST00000421077 CDK13Q14004 1512 aaKnown RBP14.95□□□□□ -0.02
AL441943.2-201ENST00000421077 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
AL441943.2-201ENST00000421077 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
AL441943.2-201ENST00000421077 PTPRKQ15262 1439 aa14.95□□□□□ -0.02
AL441943.2-201ENST00000421077 RTL5Q5HYW3 569 aaPredicted RBP14.93□□□□□ -0.02
AL441943.2-201ENST00000421077 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
AL441943.2-201ENST00000421077 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
AL441943.2-201ENST00000421077 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
AL441943.2-201ENST00000421077 DISP1Q96F81 1524 aa14.91□□□□□ -0.02
AL441943.2-201ENST00000421077 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
AL441943.2-201ENST00000421077 SUPT6HQ7KZ85 1726 aaKnown RBP14.9□□□□□ -0.02
AL441943.2-201ENST00000421077 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
AL441943.2-201ENST00000421077 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
AL441943.2-201ENST00000421077 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
AL441943.2-201ENST00000421077 HECW1Q76N89 1606 aa14.88□□□□□ -0.03
AL441943.2-201ENST00000421077 KIAA0586Q9BVV6 1533 aa14.88□□□□□ -0.03
AL441943.2-201ENST00000421077 EHBP1L1Q8N3D4 1523 aa14.88□□□□□ -0.03
AL441943.2-201ENST00000421077 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
AL441943.2-201ENST00000421077 KIAA0556O60303 1618 aa14.87□□□□□ -0.03
AL441943.2-201ENST00000421077 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
AL441943.2-201ENST00000421077 CHIC2Q9UKJ5 165 aa14.85□□□□□ -0.03
AL441943.2-201ENST00000421077 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
AL441943.2-201ENST00000421077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.84□□□□□ -0.03
AL441943.2-201ENST00000421077 CCDC18Q5T9S5 1454 aa14.84□□□□□ -0.03
AL441943.2-201ENST00000421077 ARHGEF11O15085 1522 aa14.84□□□□□ -0.03
AL441943.2-201ENST00000421077 SYNJ2O15056 1496 aa14.83□□□□□ -0.04
AL441943.2-201ENST00000421077 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms