RNA–Protein interactions for RNA: ENST00000420434.7

SP140-205, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 3,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-205ENST00000420434 ANO8Q9HCE9 1232 aaPredicted RBP11.22□□□□□ -0.61
SP140-205ENST00000420434 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
SP140-205ENST00000420434 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
SP140-205ENST00000420434 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
SP140-205ENST00000420434 SYNJ1O43426 1573 aa11.18□□□□□ -0.62
SP140-205ENST00000420434 CUX1P39880 1505 aa11.17□□□□□ -0.62
SP140-205ENST00000420434 AQRO60306 1485 aaKnown RBP eCLIP11.16□□□□□ -0.62
SP140-205ENST00000420434 ARID3CA6NKF2 412 aa11.16□□□□□ -0.62
SP140-205ENST00000420434 FGD5Q6ZNL6 1462 aa11.15□□□□□ -0.62
SP140-205ENST00000420434 URB2Q14146 1524 aaKnown RBP11.15□□□□□ -0.62
SP140-205ENST00000420434 KIF21AQ7Z4S6 1674 aa11.12□□□□□ -0.63
SP140-205ENST00000420434 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
SP140-205ENST00000420434 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
SP140-205ENST00000420434 PDIA4P13667 645 aaKnown RBP11.1□□□□□ -0.63
SP140-205ENST00000420434 HOMEZQ8IX15 550 aa11.1□□□□□ -0.63
SP140-205ENST00000420434 POLA1P09884 1462 aaPredicted RBP11.09□□□□□ -0.63
SP140-205ENST00000420434 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
SP140-205ENST00000420434 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
SP140-205ENST00000420434 NEFLP07196 543 aa11.06□□□□□ -0.64
SP140-205ENST00000420434 KIF27Q86VH2 1401 aa11.04□□□□□ -0.64
SP140-205ENST00000420434 ERCC6L2Q5T890 1561 aa11.04□□□□□ -0.64
SP140-205ENST00000420434 FOXD1Q16676 465 aa11.03□□□□□ -0.64
SP140-205ENST00000420434 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.64
SP140-205ENST00000420434 DIEXFQ68CQ4 756 aaKnown RBP11.02□□□□□ -0.64
SP140-205ENST00000420434 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.65
SP140-205ENST00000420434 PPP4R3CPQ6ZMV5 832 aa11.02□□□□□ -0.65
SP140-205ENST00000420434 WDR97A6NE52 1622 aa11.02□□□□□ -0.65
SP140-205ENST00000420434 IGF1RP08069 1367 aa11.02□□□□□ -0.65
SP140-205ENST00000420434 CARMIL1Q5VZK9 1371 aa11.01□□□□□ -0.65
SP140-205ENST00000420434 PDE4CQ08493 712 aa11□□□□□ -0.65
SP140-205ENST00000420434 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
SP140-205ENST00000420434 ARHGEF11O15085 1522 aa10.99□□□□□ -0.65
SP140-205ENST00000420434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.98□□□□□ -0.65
SP140-205ENST00000420434 HNRNPUL2Q1KMD3 747 aaKnown RBP10.98□□□□□ -0.65
SP140-205ENST00000420434 RAPGEF2Q9Y4G8 1499 aa10.98□□□□□ -0.65
SP140-205ENST00000420434 TULP1O00294 542 aaPredicted RBP10.98□□□□□ -0.65
SP140-205ENST00000420434 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
SP140-205ENST00000420434 DNMBPQ6XZF7 1577 aa10.97□□□□□ -0.65
SP140-205ENST00000420434 GAPVD1Q14C86 1478 aa10.97□□□□□ -0.65
SP140-205ENST00000420434 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
SP140-205ENST00000420434 CCER1Q8TC90 406 aaPredicted RBP10.94□□□□□ -0.66
SP140-205ENST00000420434 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
SP140-205ENST00000420434 FGD1P98174 961 aa10.89□□□□□ -0.67
SP140-205ENST00000420434 SNAPC4Q5SXM2 1469 aa10.88□□□□□ -0.67
SP140-205ENST00000420434 IFT140Q96RY7 1462 aa10.88□□□□□ -0.67
SP140-205ENST00000420434 TAF7LQ5H9L4 462 aa10.87□□□□□ -0.67
SP140-205ENST00000420434 ABCA10Q8WWZ4 1543 aa10.86□□□□□ -0.67
SP140-205ENST00000420434 BIVM-ERCC5R4GMW8 1640 aa10.86□□□□□ -0.67
SP140-205ENST00000420434 JPH4Q96JJ6 628 aa10.85□□□□□ -0.67
SP140-205ENST00000420434 MYT1LQ9UL68 1186 aa10.84□□□□□ -0.67
SP140-205ENST00000420434 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
SP140-205ENST00000420434 GOLGA3Q08378 1498 aa10.84□□□□□ -0.67
SP140-205ENST00000420434 ITGAEP38570 1179 aa10.83□□□□□ -0.68
SP140-205ENST00000420434 OSCARQ8IYS5 282 aa10.83□□□□□ -0.68
SP140-205ENST00000420434 GRIN2BQ13224 1484 aa10.83□□□□□ -0.68
SP140-205ENST00000420434 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
SP140-205ENST00000420434 CLIP1P30622 1438 aa10.82□□□□□ -0.68
SP140-205ENST00000420434 EEA1Q15075 1411 aa10.82□□□□□ -0.68
SP140-205ENST00000420434 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
SP140-205ENST00000420434 TARBP1Q13395 1621 aaKnown RBP10.8□□□□□ -0.68
SP140-205ENST00000420434 NPM2Q86SE8 214 aaKnown RBP10.79□□□□□ -0.68
SP140-205ENST00000420434 CLSPNQ9HAW4 1339 aa10.79□□□□□ -0.68
SP140-205ENST00000420434 ARAP1Q96P48 1450 aa10.79□□□□□ -0.68
SP140-205ENST00000420434 FHOD3Q2V2M9 1422 aa10.79□□□□□ -0.68
SP140-205ENST00000420434 PRXQ9BXM0 1461 aa10.79□□□□□ -0.68
SP140-205ENST00000420434 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
SP140-205ENST00000420434 CLASP1Q7Z460 1538 aa10.78□□□□□ -0.68
SP140-205ENST00000420434 TNIKQ9UKE5 1360 aa10.78□□□□□ -0.68
SP140-205ENST00000420434 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
SP140-205ENST00000420434 BCL11BQ9C0K0 894 aaPredicted RBP10.78□□□□□ -0.68
SP140-205ENST00000420434 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
SP140-205ENST00000420434 CCDC136Q96JN2 1154 aa10.76□□□□□ -0.69
SP140-205ENST00000420434 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
SP140-205ENST00000420434 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
SP140-205ENST00000420434 AAMPQ13685 434 aa10.74□□□□□ -0.69
SP140-205ENST00000420434 MIER1Q8N108 512 aa10.71□□□□□ -0.69
SP140-205ENST00000420434 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
SP140-205ENST00000420434 GRIN2AQ12879 1464 aa10.71□□□□□ -0.7
SP140-205ENST00000420434 BRD2P25440 801 aaKnown RBP10.7□□□□□ -0.7
SP140-205ENST00000420434 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
SP140-205ENST00000420434 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
SP140-205ENST00000420434 ZNF777Q9ULD5 760 aaPredicted RBP10.69□□□□□ -0.7
SP140-205ENST00000420434 CHMP4AQ9BY43 222 aa10.69□□□□□ -0.7
SP140-205ENST00000420434 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
SP140-205ENST00000420434 PRG4Q92954 1404 aaPredicted RBP10.68□□□□□ -0.7
SP140-205ENST00000420434 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
SP140-205ENST00000420434 FBXO3Q9UK99 471 aa10.68□□□□□ -0.7
SP140-205ENST00000420434 ERICH3Q5RHP9 1530 aa10.67□□□□□ -0.7
SP140-205ENST00000420434 FKBP8Q14318 412 aa10.67□□□□□ -0.7
SP140-205ENST00000420434 FAM50AQ14320 339 aaKnown RBP10.67□□□□□ -0.7
SP140-205ENST00000420434 SUPT16HQ9Y5B9 1047 aaKnown RBP10.67□□□□□ -0.7
SP140-205ENST00000420434 KIF13AQ9H1H9 1805 aa10.67□□□□□ -0.7
SP140-205ENST00000420434 CHD1O14646 1710 aa10.66□□□□□ -0.7
SP140-205ENST00000420434 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
SP140-205ENST00000420434 ILDR1Q86SU0 546 aaPredicted RBP10.65□□□□□ -0.7
SP140-205ENST00000420434 MAGI1Q96QZ7 1491 aaPredicted RBP10.65□□□□□ -0.7
SP140-205ENST00000420434 ARHGAP35Q9NRY4 1499 aa10.65□□□□□ -0.71
SP140-205ENST00000420434 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
SP140-205ENST00000420434 PBRM1Q86U86 1689 aa10.63□□□□□ -0.71
SP140-205ENST00000420434 PTPRGP23470 1445 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms