RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
NPHP1-205ENST00000418527 LOC105371045A0A1W2PR82 267 aa17.28■□□□□ 0.36
NPHP1-205ENST00000418527 APLP2Q06481 763 aa17.28■□□□□ 0.36
NPHP1-205ENST00000418527 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
NPHP1-205ENST00000418527 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
NPHP1-205ENST00000418527 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
NPHP1-205ENST00000418527 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
NPHP1-205ENST00000418527 ABCB7O75027 752 aa17.24■□□□□ 0.35
NPHP1-205ENST00000418527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
NPHP1-205ENST00000418527 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
NPHP1-205ENST00000418527 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
NPHP1-205ENST00000418527 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
NPHP1-205ENST00000418527 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
NPHP1-205ENST00000418527 KIF21BO75037 1637 aa17.2■□□□□ 0.34
NPHP1-205ENST00000418527 IGF1RP08069 1367 aa17.19■□□□□ 0.34
NPHP1-205ENST00000418527 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
NPHP1-205ENST00000418527 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
NPHP1-205ENST00000418527 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
NPHP1-205ENST00000418527 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
NPHP1-205ENST00000418527 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
NPHP1-205ENST00000418527 AQRO60306 1485 aaKnown RBP eCLIP17.14■□□□□ 0.33
NPHP1-205ENST00000418527 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
NPHP1-205ENST00000418527 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
NPHP1-205ENST00000418527 CUL7Q14999 1698 aa17.13■□□□□ 0.33
NPHP1-205ENST00000418527 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
NPHP1-205ENST00000418527 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
NPHP1-205ENST00000418527 PBRM1Q86U86 1689 aa17.11■□□□□ 0.33
NPHP1-205ENST00000418527 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
NPHP1-205ENST00000418527 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
NPHP1-205ENST00000418527 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
NPHP1-205ENST00000418527 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
NPHP1-205ENST00000418527 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
NPHP1-205ENST00000418527 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
NPHP1-205ENST00000418527 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
NPHP1-205ENST00000418527 ZBTB22O15209 634 aa16.99■□□□□ 0.31
NPHP1-205ENST00000418527 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
NPHP1-205ENST00000418527 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
NPHP1-205ENST00000418527 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
NPHP1-205ENST00000418527 RANGAP1P46060 587 aaPredicted RBP16.93■□□□□ 0.3
NPHP1-205ENST00000418527 FBLN2P98095 1184 aa16.93■□□□□ 0.3
NPHP1-205ENST00000418527 SYNJ2O15056 1496 aa16.92■□□□□ 0.3
NPHP1-205ENST00000418527 CLIP1P30622 1438 aa16.91■□□□□ 0.3
NPHP1-205ENST00000418527 CTTNBP2Q8WZ74 1663 aa16.89■□□□□ 0.29
NPHP1-205ENST00000418527 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
NPHP1-205ENST00000418527 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
NPHP1-205ENST00000418527 POLA2Q14181 598 aa16.8■□□□□ 0.28
NPHP1-205ENST00000418527 IQGAP2Q13576 1575 aa16.79■□□□□ 0.28
NPHP1-205ENST00000418527 KIAA0586Q9BVV6 1533 aa16.78■□□□□ 0.28
NPHP1-205ENST00000418527 CHD1O14646 1710 aa16.77■□□□□ 0.28
NPHP1-205ENST00000418527 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
NPHP1-205ENST00000418527 NUP160Q12769 1436 aa16.75■□□□□ 0.27
NPHP1-205ENST00000418527 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
NPHP1-205ENST00000418527 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
NPHP1-205ENST00000418527 VPS8Q8N3P4 1428 aa16.71■□□□□ 0.27
NPHP1-205ENST00000418527 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
NPHP1-205ENST00000418527 ARAP1Q96P48 1450 aa16.71■□□□□ 0.27
NPHP1-205ENST00000418527 UGGT2Q9NYU1 1516 aa16.69■□□□□ 0.26
NPHP1-205ENST00000418527 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
NPHP1-205ENST00000418527 SAMD9Q5K651 1589 aa16.67■□□□□ 0.26
NPHP1-205ENST00000418527 FHOD3Q2V2M9 1422 aa16.66■□□□□ 0.26
NPHP1-205ENST00000418527 CARMIL2Q6F5E8 1435 aa16.65■□□□□ 0.26
NPHP1-205ENST00000418527 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
NPHP1-205ENST00000418527 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
NPHP1-205ENST00000418527 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
NPHP1-205ENST00000418527 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
NPHP1-205ENST00000418527 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
NPHP1-205ENST00000418527 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
NPHP1-205ENST00000418527 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
NPHP1-205ENST00000418527 CHRDL2Q6WN34 429 aa16.57■□□□□ 0.24
NPHP1-205ENST00000418527 PRG4Q92954 1404 aaPredicted RBP16.56■□□□□ 0.24
NPHP1-205ENST00000418527 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
NPHP1-205ENST00000418527 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
NPHP1-205ENST00000418527 CASKIN1Q8WXD9 1431 aa16.54■□□□□ 0.24
NPHP1-205ENST00000418527 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
NPHP1-205ENST00000418527 SHROOM2Q13796 1616 aa16.52■□□□□ 0.24
NPHP1-205ENST00000418527 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
NPHP1-205ENST00000418527 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.24
NPHP1-205ENST00000418527 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
NPHP1-205ENST00000418527 PTPRGP23470 1445 aa16.46■□□□□ 0.23
NPHP1-205ENST00000418527 MAP3K1Q13233 1512 aa16.46■□□□□ 0.23
NPHP1-205ENST00000418527 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
NPHP1-205ENST00000418527 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
NPHP1-205ENST00000418527 TRIM26Q12899 539 aaPredicted RBP16.43■□□□□ 0.22
NPHP1-205ENST00000418527 RAPGEF6Q8TEU7 1601 aa16.43■□□□□ 0.22
NPHP1-205ENST00000418527 CFAP43Q8NDM7 1665 aa16.41■□□□□ 0.22
NPHP1-205ENST00000418527 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
NPHP1-205ENST00000418527 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
NPHP1-205ENST00000418527 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
NPHP1-205ENST00000418527 PLB1Q6P1J6 1458 aa16.38■□□□□ 0.21
NPHP1-205ENST00000418527 EPRSP07814 1512 aaKnown RBP16.37■□□□□ 0.21
NPHP1-205ENST00000418527 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
NPHP1-205ENST00000418527 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
NPHP1-205ENST00000418527 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
NPHP1-205ENST00000418527 LRRC9Q6ZRR7 1453 aa16.36■□□□□ 0.21
NPHP1-205ENST00000418527 ABCA8O94911 1581 aa16.36■□□□□ 0.21
NPHP1-205ENST00000418527 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
NPHP1-205ENST00000418527 UACAQ9BZF9 1416 aa16.35■□□□□ 0.21
NPHP1-205ENST00000418527 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
NPHP1-205ENST00000418527 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.2
NPHP1-205ENST00000418527 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms