RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
COPS3-202ENST00000417352 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
COPS3-202ENST00000417352 CAPN15O75808 1086 aa12.38□□□□□ -0.43
COPS3-202ENST00000417352 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
COPS3-202ENST00000417352 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
COPS3-202ENST00000417352 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
COPS3-202ENST00000417352 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
COPS3-202ENST00000417352 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
COPS3-202ENST00000417352 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
COPS3-202ENST00000417352 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
COPS3-202ENST00000417352 DSG3P32926 999 aa12.32□□□□□ -0.44
COPS3-202ENST00000417352 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
COPS3-202ENST00000417352 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
COPS3-202ENST00000417352 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
COPS3-202ENST00000417352 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.45
COPS3-202ENST00000417352 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
COPS3-202ENST00000417352 ABCA5Q8WWZ7 1642 aa12.24□□□□□ -0.45
COPS3-202ENST00000417352 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
COPS3-202ENST00000417352 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
COPS3-202ENST00000417352 GRIN2AQ12879 1464 aa12.2□□□□□ -0.46
COPS3-202ENST00000417352 APLP2Q06481 763 aa12.18□□□□□ -0.46
COPS3-202ENST00000417352 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
COPS3-202ENST00000417352 ADAMTS12P58397 1594 aa12.16□□□□□ -0.46
COPS3-202ENST00000417352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
COPS3-202ENST00000417352 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
COPS3-202ENST00000417352 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
COPS3-202ENST00000417352 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
COPS3-202ENST00000417352 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
COPS3-202ENST00000417352 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
COPS3-202ENST00000417352 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
COPS3-202ENST00000417352 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
COPS3-202ENST00000417352 NUP160Q12769 1436 aa12.1□□□□□ -0.47
COPS3-202ENST00000417352 PRG4Q92954 1404 aaPredicted RBP12.1□□□□□ -0.47
COPS3-202ENST00000417352 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
COPS3-202ENST00000417352 ABCB7O75027 752 aa12.08□□□□□ -0.48
COPS3-202ENST00000417352 SAMD1Q6SPF0 538 aaPredicted RBP12.07□□□□□ -0.48
COPS3-202ENST00000417352 SHROOM2Q13796 1616 aa12.04□□□□□ -0.48
COPS3-202ENST00000417352 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
COPS3-202ENST00000417352 FAM69CQ0P6D2 419 aa12□□□□□ -0.49
COPS3-202ENST00000417352 IGF1RP08069 1367 aa12□□□□□ -0.49
COPS3-202ENST00000417352 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
COPS3-202ENST00000417352 CUL7Q14999 1698 aa11.97□□□□□ -0.49
COPS3-202ENST00000417352 CARMIL1Q5VZK9 1371 aa11.96□□□□□ -0.49
COPS3-202ENST00000417352 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
COPS3-202ENST00000417352 KIAA0586Q9BVV6 1533 aa11.95□□□□□ -0.5
COPS3-202ENST00000417352 POTEHQ6S545 545 aa11.94□□□□□ -0.5
COPS3-202ENST00000417352 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
COPS3-202ENST00000417352 PTPRGP23470 1445 aa11.92□□□□□ -0.5
COPS3-202ENST00000417352 TSPOAP1O95153 1857 aa11.91□□□□□ -0.5
COPS3-202ENST00000417352 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
COPS3-202ENST00000417352 CARMIL2Q6F5E8 1435 aa11.9□□□□□ -0.5
COPS3-202ENST00000417352 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
COPS3-202ENST00000417352 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
COPS3-202ENST00000417352 TNIKQ9UKE5 1360 aa11.86□□□□□ -0.51
COPS3-202ENST00000417352 IQGAP2Q13576 1575 aa11.86□□□□□ -0.51
COPS3-202ENST00000417352 MAPKBP1O60336 1514 aa11.84□□□□□ -0.51
COPS3-202ENST00000417352 RAPGEF2Q9Y4G8 1499 aa11.83□□□□□ -0.52
COPS3-202ENST00000417352 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
COPS3-202ENST00000417352 POLA2Q14181 598 aa11.81□□□□□ -0.52
COPS3-202ENST00000417352 KDM6BO15054 1643 aa11.8□□□□□ -0.52
COPS3-202ENST00000417352 FAM9AQ8IZU1 332 aaPredicted RBP11.79□□□□□ -0.52
COPS3-202ENST00000417352 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
COPS3-202ENST00000417352 ASXL2Q76L83 1435 aa11.78□□□□□ -0.52
COPS3-202ENST00000417352 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
COPS3-202ENST00000417352 RANGAP1P46060 587 aaPredicted RBP11.78□□□□□ -0.52
COPS3-202ENST00000417352 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
COPS3-202ENST00000417352 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
COPS3-202ENST00000417352 DISP1Q96F81 1524 aa11.76□□□□□ -0.53
COPS3-202ENST00000417352 ARID3CA6NKF2 412 aa11.76□□□□□ -0.53
COPS3-202ENST00000417352 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
COPS3-202ENST00000417352 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
COPS3-202ENST00000417352 PLB1Q6P1J6 1458 aa11.76□□□□□ -0.53
COPS3-202ENST00000417352 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
COPS3-202ENST00000417352 KIAA0556O60303 1618 aa11.72□□□□□ -0.53
COPS3-202ENST00000417352 UGGT2Q9NYU1 1516 aa11.72□□□□□ -0.53
COPS3-202ENST00000417352 UHRF1BP1LA0JNW5 1464 aa11.72□□□□□ -0.53
COPS3-202ENST00000417352 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.53
COPS3-202ENST00000417352 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
COPS3-202ENST00000417352 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
COPS3-202ENST00000417352 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
COPS3-202ENST00000417352 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
COPS3-202ENST00000417352 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
COPS3-202ENST00000417352 KDM5BQ9UGL1 1544 aa11.68□□□□□ -0.54
COPS3-202ENST00000417352 GLI2P10070 1586 aa11.67□□□□□ -0.54
COPS3-202ENST00000417352 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
COPS3-202ENST00000417352 PPRC1Q5VV67 1664 aaKnown RBP11.65□□□□□ -0.54
COPS3-202ENST00000417352 TEX14Q8IWB6 1497 aa11.65□□□□□ -0.54
COPS3-202ENST00000417352 WDR7Q9Y4E6 1490 aa11.64□□□□□ -0.55
COPS3-202ENST00000417352 MAP3K4Q9Y6R4 1608 aa11.64□□□□□ -0.55
COPS3-202ENST00000417352 PRXQ9BXM0 1461 aa11.63□□□□□ -0.55
COPS3-202ENST00000417352 CD109Q6YHK3 1445 aa11.62□□□□□ -0.55
COPS3-202ENST00000417352 ABCA8O94911 1581 aa11.6□□□□□ -0.55
COPS3-202ENST00000417352 COL17A1Q9UMD9 1497 aaPredicted RBP11.6□□□□□ -0.55
COPS3-202ENST00000417352 ATP1B4Q9UN42 357 aaPredicted RBP11.59□□□□□ -0.55
COPS3-202ENST00000417352 ADGRL1O94910 1474 aa11.58□□□□□ -0.56
COPS3-202ENST00000417352 CFAP43Q8NDM7 1665 aa11.57□□□□□ -0.56
COPS3-202ENST00000417352 ZBTB22O15209 634 aa11.56□□□□□ -0.56
COPS3-202ENST00000417352 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
COPS3-202ENST00000417352 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
COPS3-202ENST00000417352 ATP10BO94823 1461 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms