RNA–Protein interactions for RNA: ENST00000416645.6

SLC1A3-203, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-203ENST00000416645 CFTRP13569 1480 aa16.48■□□□□ 0.23
SLC1A3-203ENST00000416645 PKD2Q13563 968 aa16.47■□□□□ 0.23
SLC1A3-203ENST00000416645 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
SLC1A3-203ENST00000416645 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
SLC1A3-203ENST00000416645 DSG3P32926 999 aa16.37■□□□□ 0.21
SLC1A3-203ENST00000416645 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
SLC1A3-203ENST00000416645 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
SLC1A3-203ENST00000416645 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
SLC1A3-203ENST00000416645 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
SLC1A3-203ENST00000416645 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
SLC1A3-203ENST00000416645 SSUH2Q9Y2M2 353 aa16.29■□□□□ 0.2
SLC1A3-203ENST00000416645 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
SLC1A3-203ENST00000416645 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
SLC1A3-203ENST00000416645 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
SLC1A3-203ENST00000416645 SPOCK2Q92563 424 aa16.28■□□□□ 0.2
SLC1A3-203ENST00000416645 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
SLC1A3-203ENST00000416645 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
SLC1A3-203ENST00000416645 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
SLC1A3-203ENST00000416645 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
SLC1A3-203ENST00000416645 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
SLC1A3-203ENST00000416645 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
SLC1A3-203ENST00000416645 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
SLC1A3-203ENST00000416645 ECM2O94769 699 aaPredicted RBP16.14■□□□□ 0.17
SLC1A3-203ENST00000416645 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
SLC1A3-203ENST00000416645 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
SLC1A3-203ENST00000416645 MIER1Q8N108 512 aa16.07■□□□□ 0.16
SLC1A3-203ENST00000416645 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
SLC1A3-203ENST00000416645 RIMBP3CA6NJZ7 1639 aa16.06■□□□□ 0.16
SLC1A3-203ENST00000416645 RIMBP3BA6NNM3 1639 aa16.06■□□□□ 0.16
SLC1A3-203ENST00000416645 RIMBP3Q9UFD9 1639 aa16.06■□□□□ 0.16
SLC1A3-203ENST00000416645 BBXQ8WY36 941 aaPredicted RBP16.06■□□□□ 0.16
SLC1A3-203ENST00000416645 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
SLC1A3-203ENST00000416645 VSIG10Q8N0Z9 540 aa16.04■□□□□ 0.16
SLC1A3-203ENST00000416645 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
SLC1A3-203ENST00000416645 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
SLC1A3-203ENST00000416645 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
SLC1A3-203ENST00000416645 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
SLC1A3-203ENST00000416645 RGL2O15211 777 aa16■□□□□ 0.15
SLC1A3-203ENST00000416645 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
SLC1A3-203ENST00000416645 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
SLC1A3-203ENST00000416645 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
SLC1A3-203ENST00000416645 SOGA1O94964 1423 aa15.98■□□□□ 0.15
SLC1A3-203ENST00000416645 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
SLC1A3-203ENST00000416645 CHD1O14646 1710 aa15.92■□□□□ 0.14
SLC1A3-203ENST00000416645 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
SLC1A3-203ENST00000416645 BCANQ96GW7 911 aa15.91■□□□□ 0.14
SLC1A3-203ENST00000416645 PAXIP1Q6ZW49 1069 aaPredicted RBP15.9■□□□□ 0.14
SLC1A3-203ENST00000416645 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
SLC1A3-203ENST00000416645 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
SLC1A3-203ENST00000416645 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
SLC1A3-203ENST00000416645 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
SLC1A3-203ENST00000416645 ARAP1Q96P48 1450 aa15.86■□□□□ 0.13
SLC1A3-203ENST00000416645 CUX1P39880 1505 aa15.86■□□□□ 0.13
SLC1A3-203ENST00000416645 CIZ1Q9ULV3 898 aaPredicted RBP15.85■□□□□ 0.13
SLC1A3-203ENST00000416645 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
SLC1A3-203ENST00000416645 CFAP44Q96MT7 982 aa15.84■□□□□ 0.13
SLC1A3-203ENST00000416645 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
SLC1A3-203ENST00000416645 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
SLC1A3-203ENST00000416645 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
SLC1A3-203ENST00000416645 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
SLC1A3-203ENST00000416645 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
SLC1A3-203ENST00000416645 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
SLC1A3-203ENST00000416645 SYNJ2O15056 1496 aa15.77■□□□□ 0.11
SLC1A3-203ENST00000416645 GAPVD1Q14C86 1478 aa15.77■□□□□ 0.11
SLC1A3-203ENST00000416645 CLASP1Q7Z460 1538 aa15.76■□□□□ 0.11
SLC1A3-203ENST00000416645 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
SLC1A3-203ENST00000416645 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
SLC1A3-203ENST00000416645 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
SLC1A3-203ENST00000416645 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
SLC1A3-203ENST00000416645 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
SLC1A3-203ENST00000416645 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
SLC1A3-203ENST00000416645 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
SLC1A3-203ENST00000416645 PRKCSHP14314 528 aaPredicted RBP15.64■□□□□ 0.09
SLC1A3-203ENST00000416645 NUBP1P53384 320 aa15.64■□□□□ 0.09
SLC1A3-203ENST00000416645 GSE1Q14687 1217 aa15.64■□□□□ 0.09
SLC1A3-203ENST00000416645 HS6ST3Q8IZP7 471 aa15.64■□□□□ 0.09
SLC1A3-203ENST00000416645 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
SLC1A3-203ENST00000416645 RNF25Q96BH1 459 aaPredicted RBP15.63■□□□□ 0.09
SLC1A3-203ENST00000416645 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
SLC1A3-203ENST00000416645 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
SLC1A3-203ENST00000416645 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
SLC1A3-203ENST00000416645 NUP160Q12769 1436 aa15.56■□□□□ 0.08
SLC1A3-203ENST00000416645 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
SLC1A3-203ENST00000416645 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
SLC1A3-203ENST00000416645 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
SLC1A3-203ENST00000416645 BIVM-ERCC5R4GMW8 1640 aa15.53■□□□□ 0.08
SLC1A3-203ENST00000416645 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
SLC1A3-203ENST00000416645 CEP170Q5SW79 1584 aa15.52■□□□□ 0.07
SLC1A3-203ENST00000416645 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
SLC1A3-203ENST00000416645 CREBZFQ9NS37 354 aa15.51■□□□□ 0.07
SLC1A3-203ENST00000416645 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
SLC1A3-203ENST00000416645 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
SLC1A3-203ENST00000416645 DCAF8Q5TAQ9 597 aa15.5■□□□□ 0.07
SLC1A3-203ENST00000416645 RIOK3O14730 519 aaKnown RBP15.48■□□□□ 0.07
SLC1A3-203ENST00000416645 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
SLC1A3-203ENST00000416645 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
SLC1A3-203ENST00000416645 SHROOM2Q13796 1616 aa15.44■□□□□ 0.06
SLC1A3-203ENST00000416645 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
SLC1A3-203ENST00000416645 NKX1-1Q15270 411 aaPredicted RBP15.44■□□□□ 0.06
SLC1A3-203ENST00000416645 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms