RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
LINC01888-201ENST00000415138 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
LINC01888-201ENST00000415138 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
LINC01888-201ENST00000415138 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
LINC01888-201ENST00000415138 DNAJC5Q9H3Z4 198 aa16.03■□□□□ 0.16
LINC01888-201ENST00000415138 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
LINC01888-201ENST00000415138 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
LINC01888-201ENST00000415138 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
LINC01888-201ENST00000415138 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
LINC01888-201ENST00000415138 PITPNM1O00562 1244 aa15.96■□□□□ 0.15
LINC01888-201ENST00000415138 CUX2O14529 1486 aa15.96■□□□□ 0.14
LINC01888-201ENST00000415138 WDR62O43379 1518 aa15.94■□□□□ 0.14
LINC01888-201ENST00000415138 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
LINC01888-201ENST00000415138 SSUH2Q9Y2M2 353 aa15.91■□□□□ 0.14
LINC01888-201ENST00000415138 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
LINC01888-201ENST00000415138 TOPBP1Q92547 1522 aa15.88■□□□□ 0.13
LINC01888-201ENST00000415138 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
LINC01888-201ENST00000415138 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
LINC01888-201ENST00000415138 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
LINC01888-201ENST00000415138 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
LINC01888-201ENST00000415138 CUX1P39880 1505 aa15.8■□□□□ 0.12
LINC01888-201ENST00000415138 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
LINC01888-201ENST00000415138 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC01888-201ENST00000415138 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
LINC01888-201ENST00000415138 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
LINC01888-201ENST00000415138 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
LINC01888-201ENST00000415138 SOGA1O94964 1423 aa15.74■□□□□ 0.11
LINC01888-201ENST00000415138 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
LINC01888-201ENST00000415138 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
LINC01888-201ENST00000415138 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
LINC01888-201ENST00000415138 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
LINC01888-201ENST00000415138 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
LINC01888-201ENST00000415138 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
LINC01888-201ENST00000415138 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
LINC01888-201ENST00000415138 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
LINC01888-201ENST00000415138 SPDYE4A6NLX3 237 aa15.6■□□□□ 0.09
LINC01888-201ENST00000415138 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
LINC01888-201ENST00000415138 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
LINC01888-201ENST00000415138 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01888-201ENST00000415138 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
LINC01888-201ENST00000415138 PRKAR2AP13861 404 aaKnown RBP15.58■□□□□ 0.08
LINC01888-201ENST00000415138 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
LINC01888-201ENST00000415138 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
LINC01888-201ENST00000415138 HAX1O00165 279 aa15.54■□□□□ 0.08
LINC01888-201ENST00000415138 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
LINC01888-201ENST00000415138 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
LINC01888-201ENST00000415138 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
LINC01888-201ENST00000415138 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
LINC01888-201ENST00000415138 SNAPC4Q5SXM2 1469 aa15.45■□□□□ 0.06
LINC01888-201ENST00000415138 MAGI1Q96QZ7 1491 aaPredicted RBP15.45■□□□□ 0.06
LINC01888-201ENST00000415138 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
LINC01888-201ENST00000415138 CHD1O14646 1710 aa15.44■□□□□ 0.06
LINC01888-201ENST00000415138 CHADLQ6NUI6 762 aa15.44■□□□□ 0.06
LINC01888-201ENST00000415138 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
LINC01888-201ENST00000415138 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
LINC01888-201ENST00000415138 CUL7Q14999 1698 aa15.39■□□□□ 0.05
LINC01888-201ENST00000415138 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
LINC01888-201ENST00000415138 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
LINC01888-201ENST00000415138 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
LINC01888-201ENST00000415138 IGF1RP08069 1367 aa15.35■□□□□ 0.05
LINC01888-201ENST00000415138 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
LINC01888-201ENST00000415138 EEA1Q15075 1411 aa15.34■□□□□ 0.05
LINC01888-201ENST00000415138 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
LINC01888-201ENST00000415138 CARMIL1Q5VZK9 1371 aa15.32■□□□□ 0.04
LINC01888-201ENST00000415138 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
LINC01888-201ENST00000415138 EVX2Q03828 476 aa15.27■□□□□ 0.04
LINC01888-201ENST00000415138 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
LINC01888-201ENST00000415138 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
LINC01888-201ENST00000415138 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
LINC01888-201ENST00000415138 FARP1Q9Y4F1 1045 aaPredicted RBP15.24■□□□□ 0.03
LINC01888-201ENST00000415138 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
LINC01888-201ENST00000415138 PROM2Q8N271 834 aa15.18■□□□□ 0.02
LINC01888-201ENST00000415138 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
LINC01888-201ENST00000415138 NUP160Q12769 1436 aa15.17■□□□□ 0.02
LINC01888-201ENST00000415138 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
LINC01888-201ENST00000415138 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
LINC01888-201ENST00000415138 PRXQ9BXM0 1461 aa15.16■□□□□ 0.02
LINC01888-201ENST00000415138 KIF21BO75037 1637 aa15.14■□□□□ 0.01
LINC01888-201ENST00000415138 KIAA0586Q9BVV6 1533 aa15.13■□□□□ 0.01
LINC01888-201ENST00000415138 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
LINC01888-201ENST00000415138 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
LINC01888-201ENST00000415138 JPH4Q96JJ6 628 aa15.11■□□□□ 0.01
LINC01888-201ENST00000415138 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
LINC01888-201ENST00000415138 CD44P16070 742 aaKnown RBP15.1■□□□□ 0.01
LINC01888-201ENST00000415138 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
LINC01888-201ENST00000415138 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
LINC01888-201ENST00000415138 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
LINC01888-201ENST00000415138 GOLGA3Q08378 1498 aa15.08■□□□□ 0
LINC01888-201ENST00000415138 SHROOM2Q13796 1616 aa15.07■□□□□ 0
LINC01888-201ENST00000415138 PRKCSHP14314 528 aaPredicted RBP15.07■□□□□ 0
LINC01888-201ENST00000415138 ARHGEF11O15085 1522 aa15.07■□□□□ 0
LINC01888-201ENST00000415138 FKBP8Q14318 412 aa15.06■□□□□ 0
LINC01888-201ENST00000415138 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
LINC01888-201ENST00000415138 CARMIL2Q6F5E8 1435 aa15.04■□□□□ -0
LINC01888-201ENST00000415138 RANGAP1P46060 587 aaPredicted RBP15.03■□□□□ -0
LINC01888-201ENST00000415138 HRCP23327 699 aa15.01□□□□□ -0.01
LINC01888-201ENST00000415138 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
LINC01888-201ENST00000415138 CYB5RLQ6IPT4 315 aa15□□□□□ -0.01
LINC01888-201ENST00000415138 GABBR2O75899 941 aa14.99□□□□□ -0.01
LINC01888-201ENST00000415138 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms