RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
SIK3-202ENST00000413553 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
SIK3-202ENST00000413553 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
SIK3-202ENST00000413553 TSHZ2Q9NRE2 1034 aa12.92□□□□□ -0.34
SIK3-202ENST00000413553 ERICH3Q5RHP9 1530 aa12.9□□□□□ -0.34
SIK3-202ENST00000413553 ANP32EQ9BTT0 268 aa12.89□□□□□ -0.35
SIK3-202ENST00000413553 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
SIK3-202ENST00000413553 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
SIK3-202ENST00000413553 WDR62O43379 1518 aa12.85□□□□□ -0.35
SIK3-202ENST00000413553 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.356e-6■■■■□ 25.1
SIK3-202ENST00000413553 BCANQ96GW7 911 aa12.83□□□□□ -0.36
SIK3-202ENST00000413553 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
SIK3-202ENST00000413553 TARBP1Q13395 1621 aaKnown RBP12.82□□□□□ -0.36
SIK3-202ENST00000413553 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
SIK3-202ENST00000413553 ABCA5Q8WWZ7 1642 aa12.79□□□□□ -0.36
SIK3-202ENST00000413553 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
SIK3-202ENST00000413553 CUL7Q14999 1698 aa12.78□□□□□ -0.36
SIK3-202ENST00000413553 THOC2Q8NI27 1593 aaKnown RBP12.78□□□□□ -0.36
SIK3-202ENST00000413553 P3H3Q8IVL6 736 aa12.77□□□□□ -0.36
SIK3-202ENST00000413553 KCNH8Q96L42 1107 aa12.77□□□□□ -0.36
SIK3-202ENST00000413553 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
SIK3-202ENST00000413553 FBLN2P98095 1184 aa12.77□□□□□ -0.37
SIK3-202ENST00000413553 GRIN2BQ13224 1484 aa12.75□□□□□ -0.37
SIK3-202ENST00000413553 FKBP8Q14318 412 aa12.75□□□□□ -0.37
SIK3-202ENST00000413553 ITGAEP38570 1179 aa12.73□□□□□ -0.37
SIK3-202ENST00000413553 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
SIK3-202ENST00000413553 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
SIK3-202ENST00000413553 CHMP7Q8WUX9 453 aaPredicted RBP12.73□□□□□ -0.37
SIK3-202ENST00000413553 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
SIK3-202ENST00000413553 PBRM1Q86U86 1689 aa12.71□□□□□ -0.38
SIK3-202ENST00000413553 ARAP1Q96P48 1450 aa12.7□□□□□ -0.38
SIK3-202ENST00000413553 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
SIK3-202ENST00000413553 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
SIK3-202ENST00000413553 NEFLP07196 543 aa12.68□□□□□ -0.38
SIK3-202ENST00000413553 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
SIK3-202ENST00000413553 RRBP1Q9P2E9 1410 aaKnown RBP12.67□□□□□ -0.38
SIK3-202ENST00000413553 DDX10Q13206 875 aaKnown RBP12.66□□□□□ -0.38
SIK3-202ENST00000413553 CCNB3Q8WWL7 1395 aa12.65□□□□□ -0.38
SIK3-202ENST00000413553 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
SIK3-202ENST00000413553 RBM19Q9Y4C8 960 aaKnown RBP12.64□□□□□ -0.39
SIK3-202ENST00000413553 CTTNBP2Q8WZ74 1663 aa12.64□□□□□ -0.39
SIK3-202ENST00000413553 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
SIK3-202ENST00000413553 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
SIK3-202ENST00000413553 MAGI1Q96QZ7 1491 aaPredicted RBP12.61□□□□□ -0.39
SIK3-202ENST00000413553 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
SIK3-202ENST00000413553 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
SIK3-202ENST00000413553 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
SIK3-202ENST00000413553 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
SIK3-202ENST00000413553 EFCAB5A4FU69 1503 aa12.58□□□□□ -0.4
SIK3-202ENST00000413553 IQGAP2Q13576 1575 aa12.56□□□□□ -0.4
SIK3-202ENST00000413553 HIRIP3Q9BW71 556 aaPredicted RBP12.56□□□□□ -0.4
SIK3-202ENST00000413553 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
SIK3-202ENST00000413553 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
SIK3-202ENST00000413553 KIAA0586Q9BVV6 1533 aa12.54□□□□□ -0.4
SIK3-202ENST00000413553 ANP32CO43423 234 aa12.54□□□□□ -0.4
SIK3-202ENST00000413553 SETD5Q9C0A6 1442 aa12.52□□□□□ -0.41
SIK3-202ENST00000413553 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
SIK3-202ENST00000413553 ARID3CA6NKF2 412 aa12.51□□□□□ -0.41
SIK3-202ENST00000413553 PPP1R15AO75807 674 aaPredicted RBP12.51□□□□□ -0.41
SIK3-202ENST00000413553 FAM50AQ14320 339 aaKnown RBP12.5□□□□□ -0.41
SIK3-202ENST00000413553 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
SIK3-202ENST00000413553 CCER2I3L3R5 266 aa12.49□□□□□ -0.41
SIK3-202ENST00000413553 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
SIK3-202ENST00000413553 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
SIK3-202ENST00000413553 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
SIK3-202ENST00000413553 MSH5O43196 834 aa12.48□□□□□ -0.41
SIK3-202ENST00000413553 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
SIK3-202ENST00000413553 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
SIK3-202ENST00000413553 TIAM1Q13009 1591 aa12.47□□□□□ -0.41
SIK3-202ENST00000413553 CARMIL2Q6F5E8 1435 aa12.46□□□□□ -0.42
SIK3-202ENST00000413553 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.42
SIK3-202ENST00000413553 NUP160Q12769 1436 aa12.45□□□□□ -0.42
SIK3-202ENST00000413553 MTUS2Q5JR59 1369 aa12.45□□□□□ -0.42
SIK3-202ENST00000413553 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
SIK3-202ENST00000413553 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
SIK3-202ENST00000413553 LRRC9Q6ZRR7 1453 aa12.43□□□□□ -0.42
SIK3-202ENST00000413553 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
SIK3-202ENST00000413553 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
SIK3-202ENST00000413553 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
SIK3-202ENST00000413553 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
SIK3-202ENST00000413553 TIMELESSQ9UNS1 1208 aa12.41□□□□□ -0.42
SIK3-202ENST00000413553 KIAA0556O60303 1618 aa12.41□□□□□ -0.42
SIK3-202ENST00000413553 CHD1O14646 1710 aa12.4□□□□□ -0.42
SIK3-202ENST00000413553 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.42
SIK3-202ENST00000413553 TONSLQ96HA7 1378 aa12.39□□□□□ -0.43
SIK3-202ENST00000413553 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
SIK3-202ENST00000413553 CFAP43Q8NDM7 1665 aa12.36□□□□□ -0.43
SIK3-202ENST00000413553 HECW1Q76N89 1606 aa12.36□□□□□ -0.43
SIK3-202ENST00000413553 CCDC18Q5T9S5 1454 aa12.35□□□□□ -0.43
SIK3-202ENST00000413553 EPRSP07814 1512 aaKnown RBP12.34□□□□□ -0.43
SIK3-202ENST00000413553 PTPRGP23470 1445 aa12.34□□□□□ -0.43
SIK3-202ENST00000413553 PLB1Q6P1J6 1458 aa12.34□□□□□ -0.43
SIK3-202ENST00000413553 CDK13Q14004 1512 aaKnown RBP12.33□□□□□ -0.44
SIK3-202ENST00000413553 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
SIK3-202ENST00000413553 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
SIK3-202ENST00000413553 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
SIK3-202ENST00000413553 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
SIK3-202ENST00000413553 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
SIK3-202ENST00000413553 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
SIK3-202ENST00000413553 PPP4R2Q9NY27 417 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms