RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
ATRIP-204ENST00000412052 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
ATRIP-204ENST00000412052 SIN3AQ96ST3 1273 aa20.64■□□□□ 0.89
ATRIP-204ENST00000412052 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
ATRIP-204ENST00000412052 FHOD3Q2V2M9 1422 aa20.61■□□□□ 0.89
ATRIP-204ENST00000412052 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
ATRIP-204ENST00000412052 SETD5Q9C0A6 1442 aa20.58■□□□□ 0.89
ATRIP-204ENST00000412052 FANCD2Q9BXW9 1451 aa20.57■□□□□ 0.88
ATRIP-204ENST00000412052 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
ATRIP-204ENST00000412052 MAP3K1Q13233 1512 aa20.54■□□□□ 0.88
ATRIP-204ENST00000412052 HIRIP3Q9BW71 556 aaPredicted RBP20.54■□□□□ 0.88
ATRIP-204ENST00000412052 NESP48681 1621 aa20.54■□□□□ 0.88
ATRIP-204ENST00000412052 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
ATRIP-204ENST00000412052 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
ATRIP-204ENST00000412052 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
ATRIP-204ENST00000412052 CFAP43Q8NDM7 1665 aa20.5■□□□□ 0.87
ATRIP-204ENST00000412052 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
ATRIP-204ENST00000412052 DDX10Q13206 875 aaKnown RBP20.48■□□□□ 0.87
ATRIP-204ENST00000412052 TOPBP1Q92547 1522 aa20.45■□□□□ 0.86
ATRIP-204ENST00000412052 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
ATRIP-204ENST00000412052 ABCA10Q8WWZ4 1543 aa20.42■□□□□ 0.86
ATRIP-204ENST00000412052 FYCO1Q9BQS8 1478 aa20.39■□□□□ 0.85
ATRIP-204ENST00000412052 CASKIN1Q8WXD9 1431 aa20.38■□□□□ 0.85
ATRIP-204ENST00000412052 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
ATRIP-204ENST00000412052 PTPRKQ15262 1439 aa20.34■□□□□ 0.85
ATRIP-204ENST00000412052 BCANQ96GW7 911 aa20.33■□□□□ 0.85
ATRIP-204ENST00000412052 CTTNBP2Q8WZ74 1663 aa20.33■□□□□ 0.84
ATRIP-204ENST00000412052 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
ATRIP-204ENST00000412052 EFCAB5A4FU69 1503 aa20.32■□□□□ 0.84
ATRIP-204ENST00000412052 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
ATRIP-204ENST00000412052 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
ATRIP-204ENST00000412052 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
ATRIP-204ENST00000412052 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
ATRIP-204ENST00000412052 MTUS2Q5JR59 1369 aa20.3■□□□□ 0.84
ATRIP-204ENST00000412052 CUL7Q14999 1698 aa20.29■□□□□ 0.84
ATRIP-204ENST00000412052 LRRIQ1Q96JM4 1722 aa20.28■□□□□ 0.84
ATRIP-204ENST00000412052 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.84
ATRIP-204ENST00000412052 CCDC18Q5T9S5 1454 aa20.26■□□□□ 0.83
ATRIP-204ENST00000412052 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
ATRIP-204ENST00000412052 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
ATRIP-204ENST00000412052 TSHZ2Q9NRE2 1034 aa20.23■□□□□ 0.83
ATRIP-204ENST00000412052 TONSLQ96HA7 1378 aa20.22■□□□□ 0.83
ATRIP-204ENST00000412052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.21■□□□□ 0.83
ATRIP-204ENST00000412052 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
ATRIP-204ENST00000412052 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
ATRIP-204ENST00000412052 FKBP8Q14318 412 aa20.19■□□□□ 0.82
ATRIP-204ENST00000412052 PTPN23Q9H3S7 1636 aa20.19■□□□□ 0.82
ATRIP-204ENST00000412052 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
ATRIP-204ENST00000412052 HFM1A2PYH4 1435 aa20.18■□□□□ 0.82
ATRIP-204ENST00000412052 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
ATRIP-204ENST00000412052 TIMELESSQ9UNS1 1208 aa20.18■□□□□ 0.82
ATRIP-204ENST00000412052 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
ATRIP-204ENST00000412052 SAMD9Q5K651 1589 aa20.17■□□□□ 0.82
ATRIP-204ENST00000412052 NAIPQ13075 1403 aa20.17■□□□□ 0.82
ATRIP-204ENST00000412052 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
ATRIP-204ENST00000412052 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
ATRIP-204ENST00000412052 MAGI3Q5TCQ9 1506 aa20.15■□□□□ 0.82
ATRIP-204ENST00000412052 MYOM3Q5VTT5 1437 aa20.15■□□□□ 0.82
ATRIP-204ENST00000412052 UACAQ9BZF9 1416 aa20.15■□□□□ 0.82
ATRIP-204ENST00000412052 ANP32CO43423 234 aa20.14■□□□□ 0.82
ATRIP-204ENST00000412052 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
ATRIP-204ENST00000412052 KDM5BQ9UGL1 1544 aa20.08■□□□□ 0.81
ATRIP-204ENST00000412052 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.8
ATRIP-204ENST00000412052 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
ATRIP-204ENST00000412052 CCER2I3L3R5 266 aa20.06■□□□□ 0.8
ATRIP-204ENST00000412052 FOXD1Q16676 465 aa20.05■□□□□ 0.8
ATRIP-204ENST00000412052 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
ATRIP-204ENST00000412052 KDM6BO15054 1643 aa20.05■□□□□ 0.8
ATRIP-204ENST00000412052 UGGT2Q9NYU1 1516 aa20.05■□□□□ 0.8
ATRIP-204ENST00000412052 DENND4BO75064 1496 aaPredicted RBP20.04■□□□□ 0.8
ATRIP-204ENST00000412052 MYT1Q01538 1121 aa20.04■□□□□ 0.8
ATRIP-204ENST00000412052 CDK13Q14004 1512 aaKnown RBP20.02■□□□□ 0.8
ATRIP-204ENST00000412052 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
ATRIP-204ENST00000412052 ARHGEF11O15085 1522 aa20■□□□□ 0.79
ATRIP-204ENST00000412052 TARBP1Q13395 1621 aaKnown RBP19.99■□□□□ 0.79
ATRIP-204ENST00000412052 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
ATRIP-204ENST00000412052 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
ATRIP-204ENST00000412052 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
ATRIP-204ENST00000412052 NEFLP07196 543 aa19.96■□□□□ 0.79
ATRIP-204ENST00000412052 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
ATRIP-204ENST00000412052 IRX6P78412 446 aaPredicted RBP19.93■□□□□ 0.78
ATRIP-204ENST00000412052 HNRNPUQ00839 825 aaKnown RBP eCLIP19.93■□□□□ 0.78
ATRIP-204ENST00000412052 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
ATRIP-204ENST00000412052 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
ATRIP-204ENST00000412052 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
ATRIP-204ENST00000412052 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
ATRIP-204ENST00000412052 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
ATRIP-204ENST00000412052 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
ATRIP-204ENST00000412052 IQGAP2Q13576 1575 aa19.91■□□□□ 0.78
ATRIP-204ENST00000412052 GCC2Q8IWJ2 1684 aa19.91■□□□□ 0.78
ATRIP-204ENST00000412052 ZNF644Q9H582 1327 aaPredicted RBP19.9■□□□□ 0.78
ATRIP-204ENST00000412052 C11orf95C9JLR9 678 aaPredicted RBP19.9■□□□□ 0.78
ATRIP-204ENST00000412052 WDR62O43379 1518 aa19.86■□□□□ 0.77
ATRIP-204ENST00000412052 ADAMTS12P58397 1594 aa19.86■□□□□ 0.77
ATRIP-204ENST00000412052 EIF4G2P78344 907 aaKnown RBP eCLIP19.84■□□□□ 0.77
ATRIP-204ENST00000412052 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
ATRIP-204ENST00000412052 NBPF8Q3BBV2 869 aa19.83■□□□□ 0.77
ATRIP-204ENST00000412052 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
ATRIP-204ENST00000412052 MIA2Q96PC5 1412 aa19.79■□□□□ 0.76
ATRIP-204ENST00000412052 AKNAQ7Z591 1439 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms