RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
LINC02539-201ENST00000411615 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
LINC02539-201ENST00000411615 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
LINC02539-201ENST00000411615 PBRM1Q86U86 1689 aa14.58□□□□□ -0.08
LINC02539-201ENST00000411615 IGF1RP08069 1367 aa14.57□□□□□ -0.08
LINC02539-201ENST00000411615 MAGI1Q96QZ7 1491 aaPredicted RBP14.56□□□□□ -0.08
LINC02539-201ENST00000411615 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
LINC02539-201ENST00000411615 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
LINC02539-201ENST00000411615 CUL7Q14999 1698 aa14.52□□□□□ -0.09
LINC02539-201ENST00000411615 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
LINC02539-201ENST00000411615 FHAD1B1AJZ9 1412 aa14.5□□□□□ -0.09
LINC02539-201ENST00000411615 CARMIL1Q5VZK9 1371 aa14.48□□□□□ -0.09
LINC02539-201ENST00000411615 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
LINC02539-201ENST00000411615 SYNJ2O15056 1496 aa14.47□□□□□ -0.09
LINC02539-201ENST00000411615 PRXQ9BXM0 1461 aa14.46□□□□□ -0.09
LINC02539-201ENST00000411615 CAPN15O75808 1086 aa14.43□□□□□ -0.1
LINC02539-201ENST00000411615 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
LINC02539-201ENST00000411615 CHMP7Q8WUX9 453 aaPredicted RBP14.43□□□□□ -0.1
LINC02539-201ENST00000411615 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
LINC02539-201ENST00000411615 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
LINC02539-201ENST00000411615 KIF21BO75037 1637 aa14.41□□□□□ -0.1
LINC02539-201ENST00000411615 GRIN2AQ12879 1464 aa14.41□□□□□ -0.1
LINC02539-201ENST00000411615 CHD1O14646 1710 aa14.39□□□□□ -0.11
LINC02539-201ENST00000411615 FBLN2P98095 1184 aa14.37□□□□□ -0.11
LINC02539-201ENST00000411615 NUP160Q12769 1436 aa14.35□□□□□ -0.11
LINC02539-201ENST00000411615 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
LINC02539-201ENST00000411615 GOLGA3Q08378 1498 aa14.33□□□□□ -0.12
LINC02539-201ENST00000411615 DSG3P32926 999 aa14.32□□□□□ -0.12
LINC02539-201ENST00000411615 CEP170Q5SW79 1584 aa14.3□□□□□ -0.12
LINC02539-201ENST00000411615 KIAA0586Q9BVV6 1533 aa14.3□□□□□ -0.12
LINC02539-201ENST00000411615 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
LINC02539-201ENST00000411615 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.12
LINC02539-201ENST00000411615 CTTNBP2Q8WZ74 1663 aa14.26□□□□□ -0.13
LINC02539-201ENST00000411615 UBTFP17480 764 aaKnown RBP14.24□□□□□ -0.13
LINC02539-201ENST00000411615 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
LINC02539-201ENST00000411615 IQGAP2Q13576 1575 aa14.23□□□□□ -0.13
LINC02539-201ENST00000411615 ZBTB22O15209 634 aa14.23□□□□□ -0.13
LINC02539-201ENST00000411615 ABCB7O75027 752 aa14.23□□□□□ -0.13
LINC02539-201ENST00000411615 JPH4Q96JJ6 628 aa14.21□□□□□ -0.13
LINC02539-201ENST00000411615 SHROOM2Q13796 1616 aa14.21□□□□□ -0.13
LINC02539-201ENST00000411615 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
LINC02539-201ENST00000411615 UGGT2Q9NYU1 1516 aa14.19□□□□□ -0.14
LINC02539-201ENST00000411615 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
LINC02539-201ENST00000411615 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
LINC02539-201ENST00000411615 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
LINC02539-201ENST00000411615 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
LINC02539-201ENST00000411615 PRG4Q92954 1404 aaPredicted RBP14.13□□□□□ -0.15
LINC02539-201ENST00000411615 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
LINC02539-201ENST00000411615 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
LINC02539-201ENST00000411615 DISP1Q96F81 1524 aa14.1□□□□□ -0.15
LINC02539-201ENST00000411615 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
LINC02539-201ENST00000411615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
LINC02539-201ENST00000411615 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
LINC02539-201ENST00000411615 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
LINC02539-201ENST00000411615 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
LINC02539-201ENST00000411615 KIAA0556O60303 1618 aa14.08□□□□□ -0.15
LINC02539-201ENST00000411615 CLIP1P30622 1438 aa14.07□□□□□ -0.16
LINC02539-201ENST00000411615 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
LINC02539-201ENST00000411615 ARHGEF11O15085 1522 aa14.06□□□□□ -0.16
LINC02539-201ENST00000411615 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
LINC02539-201ENST00000411615 ARHGAP35Q9NRY4 1499 aa14.06□□□□□ -0.16
LINC02539-201ENST00000411615 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
LINC02539-201ENST00000411615 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
LINC02539-201ENST00000411615 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
LINC02539-201ENST00000411615 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
LINC02539-201ENST00000411615 PTPRGP23470 1445 aa14.01□□□□□ -0.17
LINC02539-201ENST00000411615 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
LINC02539-201ENST00000411615 APLP2Q06481 763 aa13.99□□□□□ -0.17
LINC02539-201ENST00000411615 P3H3Q8IVL6 736 aa13.99□□□□□ -0.17
LINC02539-201ENST00000411615 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
LINC02539-201ENST00000411615 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
LINC02539-201ENST00000411615 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
LINC02539-201ENST00000411615 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
LINC02539-201ENST00000411615 ABCA8O94911 1581 aa13.93□□□□□ -0.18
LINC02539-201ENST00000411615 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
LINC02539-201ENST00000411615 POLA2Q14181 598 aa13.91□□□□□ -0.18
LINC02539-201ENST00000411615 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
LINC02539-201ENST00000411615 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
LINC02539-201ENST00000411615 RAPGEF6Q8TEU7 1601 aa13.9□□□□□ -0.18
LINC02539-201ENST00000411615 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
LINC02539-201ENST00000411615 ABCC2Q92887 1545 aa13.9□□□□□ -0.19
LINC02539-201ENST00000411615 CASKIN1Q8WXD9 1431 aa13.9□□□□□ -0.19
LINC02539-201ENST00000411615 TTBK1Q5TCY1 1321 aaPredicted RBP13.88□□□□□ -0.19
LINC02539-201ENST00000411615 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
LINC02539-201ENST00000411615 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
LINC02539-201ENST00000411615 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
LINC02539-201ENST00000411615 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
LINC02539-201ENST00000411615 NUP153P49790 1475 aaKnown RBP13.85□□□□□ -0.19
LINC02539-201ENST00000411615 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
LINC02539-201ENST00000411615 CCDC18Q5T9S5 1454 aa13.82□□□□□ -0.2
LINC02539-201ENST00000411615 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC02539-201ENST00000411615 ATP10BO94823 1461 aa13.81□□□□□ -0.2
LINC02539-201ENST00000411615 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
LINC02539-201ENST00000411615 MAP3K1Q13233 1512 aa13.81□□□□□ -0.2
LINC02539-201ENST00000411615 ZCCHC11Q5TAX3 1644 aaKnown RBP13.79□□□□□ -0.2
LINC02539-201ENST00000411615 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
LINC02539-201ENST00000411615 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
LINC02539-201ENST00000411615 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
LINC02539-201ENST00000411615 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
LINC02539-201ENST00000411615 PLEKHD1A6NEE1 506 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms