RNA–Protein interactions for RNA: ENST00000408031.1

GRAMD4-203, Transcript of GRAM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene GRAMD4, Length 2,834 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-203ENST00000408031 KCNH8Q96L42 1107 aa22.81■■□□□ 1.24
GRAMD4-203ENST00000408031 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
GRAMD4-203ENST00000408031 ARHGAP35Q9NRY4 1499 aa22.78■■□□□ 1.24
GRAMD4-203ENST00000408031 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
GRAMD4-203ENST00000408031 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
GRAMD4-203ENST00000408031 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
GRAMD4-203ENST00000408031 HIRIP3Q9BW71 556 aaPredicted RBP22.75■■□□□ 1.23
GRAMD4-203ENST00000408031 CCNB3Q8WWL7 1395 aa22.73■■□□□ 1.23
GRAMD4-203ENST00000408031 SIN3AQ96ST3 1273 aa22.71■■□□□ 1.23
GRAMD4-203ENST00000408031 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
GRAMD4-203ENST00000408031 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
GRAMD4-203ENST00000408031 BCANQ96GW7 911 aa22.68■■□□□ 1.22
GRAMD4-203ENST00000408031 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
GRAMD4-203ENST00000408031 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
GRAMD4-203ENST00000408031 DDX10Q13206 875 aaKnown RBP22.66■■□□□ 1.22
GRAMD4-203ENST00000408031 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
GRAMD4-203ENST00000408031 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
GRAMD4-203ENST00000408031 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
GRAMD4-203ENST00000408031 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
GRAMD4-203ENST00000408031 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
GRAMD4-203ENST00000408031 FHOD3Q2V2M9 1422 aa22.54■■□□□ 1.2
GRAMD4-203ENST00000408031 KIF21AQ7Z4S6 1674 aa22.53■■□□□ 1.2
GRAMD4-203ENST00000408031 PHLDB1Q86UU1 1377 aa22.48■■□□□ 1.19
GRAMD4-203ENST00000408031 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
GRAMD4-203ENST00000408031 TRIM52Q96A61 297 aa22.45■■□□□ 1.18
GRAMD4-203ENST00000408031 ANP32EQ9BTT0 268 aa22.45■■□□□ 1.18
GRAMD4-203ENST00000408031 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
GRAMD4-203ENST00000408031 SETD5Q9C0A6 1442 aa22.44■■□□□ 1.18
GRAMD4-203ENST00000408031 TIAM1Q13009 1591 aa22.43■■□□□ 1.18
GRAMD4-203ENST00000408031 FKBP8Q14318 412 aa22.43■■□□□ 1.18
GRAMD4-203ENST00000408031 CUL7Q14999 1698 aa22.43■■□□□ 1.18
GRAMD4-203ENST00000408031 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
GRAMD4-203ENST00000408031 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
GRAMD4-203ENST00000408031 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
GRAMD4-203ENST00000408031 TSHZ2Q9NRE2 1034 aa22.39■■□□□ 1.17
GRAMD4-203ENST00000408031 MAPKBP1O60336 1514 aa22.39■■□□□ 1.17
GRAMD4-203ENST00000408031 LRRC9Q6ZRR7 1453 aa22.37■■□□□ 1.17
GRAMD4-203ENST00000408031 ABCA5Q8WWZ7 1642 aa22.37■■□□□ 1.17
GRAMD4-203ENST00000408031 AQRO60306 1485 aaKnown RBP eCLIP22.35■■□□□ 1.171e-6■■■■■ 29.8
GRAMD4-203ENST00000408031 CTTNBP2Q8WZ74 1663 aa22.34■■□□□ 1.17
GRAMD4-203ENST00000408031 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
GRAMD4-203ENST00000408031 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
GRAMD4-203ENST00000408031 ANP32CO43423 234 aa22.27■■□□□ 1.16
GRAMD4-203ENST00000408031 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
GRAMD4-203ENST00000408031 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
GRAMD4-203ENST00000408031 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
GRAMD4-203ENST00000408031 PPP1R15AO75807 674 aaPredicted RBP22.26■■□□□ 1.15
GRAMD4-203ENST00000408031 CASKIN1Q8WXD9 1431 aa22.25■■□□□ 1.15
GRAMD4-203ENST00000408031 FYCO1Q9BQS8 1478 aa22.25■■□□□ 1.15
GRAMD4-203ENST00000408031 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
GRAMD4-203ENST00000408031 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
GRAMD4-203ENST00000408031 NEFLP07196 543 aa22.21■■□□□ 1.15
GRAMD4-203ENST00000408031 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
GRAMD4-203ENST00000408031 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
GRAMD4-203ENST00000408031 ZNF608Q9ULD9 1512 aaPredicted RBP22.2■■□□□ 1.14
GRAMD4-203ENST00000408031 MTUS2Q5JR59 1369 aa22.19■■□□□ 1.14
GRAMD4-203ENST00000408031 IRX6P78412 446 aaPredicted RBP22.16■■□□□ 1.14
GRAMD4-203ENST00000408031 SNAPC4Q5SXM2 1469 aa22.16■■□□□ 1.14
GRAMD4-203ENST00000408031 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
GRAMD4-203ENST00000408031 RRP7BPQ9NSQ0 103 aa22.16■■□□□ 1.14
GRAMD4-203ENST00000408031 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
GRAMD4-203ENST00000408031 SAMD9Q5K651 1589 aa22.13■■□□□ 1.13
GRAMD4-203ENST00000408031 CNGB1Q14028 1251 aaPredicted RBP22.11■■□□□ 1.13
GRAMD4-203ENST00000408031 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
GRAMD4-203ENST00000408031 FBLN2P98095 1184 aa22.08■■□□□ 1.13
GRAMD4-203ENST00000408031 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
GRAMD4-203ENST00000408031 HNRNPUQ00839 825 aaKnown RBP eCLIP22.07■■□□□ 1.12
GRAMD4-203ENST00000408031 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
GRAMD4-203ENST00000408031 LRRIQ1Q96JM4 1722 aa22.05■■□□□ 1.12
GRAMD4-203ENST00000408031 PTPRKQ15262 1439 aa22.04■■□□□ 1.12
GRAMD4-203ENST00000408031 FOXD1Q16676 465 aa22.04■■□□□ 1.12
GRAMD4-203ENST00000408031 FGD6Q6ZV73 1430 aa22.04■■□□□ 1.12
GRAMD4-203ENST00000408031 IQGAP2Q13576 1575 aa22.03■■□□□ 1.12
GRAMD4-203ENST00000408031 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
GRAMD4-203ENST00000408031 WDR62O43379 1518 aa22.03■■□□□ 1.12
GRAMD4-203ENST00000408031 CCDC18Q5T9S5 1454 aa22.02■■□□□ 1.11
GRAMD4-203ENST00000408031 NCOA2Q15596 1464 aa22■■□□□ 1.11
GRAMD4-203ENST00000408031 CCER2I3L3R5 266 aa22■■□□□ 1.11
GRAMD4-203ENST00000408031 RBM19Q9Y4C8 960 aaKnown RBP21.98■■□□□ 1.11
GRAMD4-203ENST00000408031 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
GRAMD4-203ENST00000408031 MAGI3Q5TCQ9 1506 aa21.95■■□□□ 1.1
GRAMD4-203ENST00000408031 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.1
GRAMD4-203ENST00000408031 CDK13Q14004 1512 aaKnown RBP21.95■■□□□ 1.1
GRAMD4-203ENST00000408031 HSPA5P11021 654 aaKnown RBP21.94■■□□□ 1.1
GRAMD4-203ENST00000408031 MYOM3Q5VTT5 1437 aa21.93■■□□□ 1.1
GRAMD4-203ENST00000408031 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
GRAMD4-203ENST00000408031 CCDC184Q52MB2 194 aa21.9■■□□□ 1.1
GRAMD4-203ENST00000408031 FAM9BQ8IZU0 186 aa21.9■■□□□ 1.1
GRAMD4-203ENST00000408031 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
GRAMD4-203ENST00000408031 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.1
GRAMD4-203ENST00000408031 EPRSP07814 1512 aaKnown RBP21.89■■□□□ 1.09
GRAMD4-203ENST00000408031 POLR3GLQ9BT43 218 aa21.88■■□□□ 1.09
GRAMD4-203ENST00000408031 UACAQ9BZF9 1416 aa21.88■■□□□ 1.09
GRAMD4-203ENST00000408031 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
GRAMD4-203ENST00000408031 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
GRAMD4-203ENST00000408031 NAIPQ13075 1403 aa21.87■■□□□ 1.09
GRAMD4-203ENST00000408031 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
GRAMD4-203ENST00000408031 WASHC2AQ641Q2 1341 aa21.87■■□□□ 1.09
GRAMD4-203ENST00000408031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.87■■□□□ 1.09
GRAMD4-203ENST00000408031 KIAA0586Q9BVV6 1533 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms