RNA–Protein interactions for RNA: ENST00000407851.1

TYMSP1-201, Transcript of thymidylate synthetase pseudogene 1, humanhuman

BASIC

Gene TYMSP1, Length 869 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP1-201ENST00000407851 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
TYMSP1-201ENST00000407851 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
TYMSP1-201ENST00000407851 FBLN2P98095 1184 aa13.56□□□□□ -0.24
TYMSP1-201ENST00000407851 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
TYMSP1-201ENST00000407851 CFTRP13569 1480 aa13.55□□□□□ -0.24
TYMSP1-201ENST00000407851 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
TYMSP1-201ENST00000407851 CEP164Q9UPV0 1460 aa13.53□□□□□ -0.24
TYMSP1-201ENST00000407851 WDR62O43379 1518 aa13.49□□□□□ -0.25
TYMSP1-201ENST00000407851 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
TYMSP1-201ENST00000407851 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
TYMSP1-201ENST00000407851 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
TYMSP1-201ENST00000407851 URB2Q14146 1524 aaKnown RBP13.4□□□□□ -0.26
TYMSP1-201ENST00000407851 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
TYMSP1-201ENST00000407851 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
TYMSP1-201ENST00000407851 SUPT5HO00267 1087 aaKnown RBP13.31□□□□□ -0.28
TYMSP1-201ENST00000407851 GABBR2O75899 941 aa13.31□□□□□ -0.28
TYMSP1-201ENST00000407851 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
TYMSP1-201ENST00000407851 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
TYMSP1-201ENST00000407851 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
TYMSP1-201ENST00000407851 LHX8Q68G74 356 aa13.29□□□□□ -0.28
TYMSP1-201ENST00000407851 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
TYMSP1-201ENST00000407851 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
TYMSP1-201ENST00000407851 IFT140Q96RY7 1462 aa13.25□□□□□ -0.29
TYMSP1-201ENST00000407851 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
TYMSP1-201ENST00000407851 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
TYMSP1-201ENST00000407851 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
TYMSP1-201ENST00000407851 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
TYMSP1-201ENST00000407851 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
TYMSP1-201ENST00000407851 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
TYMSP1-201ENST00000407851 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.3
TYMSP1-201ENST00000407851 RAD54L2Q9Y4B4 1467 aa13.15□□□□□ -0.3
TYMSP1-201ENST00000407851 SOGA1O94964 1423 aa13.13□□□□□ -0.31
TYMSP1-201ENST00000407851 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
TYMSP1-201ENST00000407851 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
TYMSP1-201ENST00000407851 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
TYMSP1-201ENST00000407851 CUX1P39880 1505 aa13.1□□□□□ -0.31
TYMSP1-201ENST00000407851 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
TYMSP1-201ENST00000407851 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
TYMSP1-201ENST00000407851 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
TYMSP1-201ENST00000407851 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
TYMSP1-201ENST00000407851 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
TYMSP1-201ENST00000407851 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
TYMSP1-201ENST00000407851 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
TYMSP1-201ENST00000407851 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
TYMSP1-201ENST00000407851 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
TYMSP1-201ENST00000407851 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
TYMSP1-201ENST00000407851 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
TYMSP1-201ENST00000407851 CHD1O14646 1710 aa12.97□□□□□ -0.33
TYMSP1-201ENST00000407851 CLCN6P51797 869 aa12.96□□□□□ -0.33
TYMSP1-201ENST00000407851 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.33
TYMSP1-201ENST00000407851 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.33
TYMSP1-201ENST00000407851 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.34
TYMSP1-201ENST00000407851 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
TYMSP1-201ENST00000407851 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
TYMSP1-201ENST00000407851 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
TYMSP1-201ENST00000407851 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
TYMSP1-201ENST00000407851 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
TYMSP1-201ENST00000407851 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
TYMSP1-201ENST00000407851 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
TYMSP1-201ENST00000407851 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
TYMSP1-201ENST00000407851 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
TYMSP1-201ENST00000407851 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
TYMSP1-201ENST00000407851 BIVM-ERCC5R4GMW8 1640 aa12.86□□□□□ -0.35
TYMSP1-201ENST00000407851 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
TYMSP1-201ENST00000407851 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
TYMSP1-201ENST00000407851 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
TYMSP1-201ENST00000407851 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
TYMSP1-201ENST00000407851 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
TYMSP1-201ENST00000407851 ADAMTS12P58397 1594 aa12.78□□□□□ -0.36
TYMSP1-201ENST00000407851 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
TYMSP1-201ENST00000407851 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
TYMSP1-201ENST00000407851 NUP160Q12769 1436 aa12.75□□□□□ -0.37
TYMSP1-201ENST00000407851 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
TYMSP1-201ENST00000407851 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
TYMSP1-201ENST00000407851 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
TYMSP1-201ENST00000407851 IGF1RP08069 1367 aa12.7□□□□□ -0.38
TYMSP1-201ENST00000407851 ERCC6L2Q5T890 1561 aa12.7□□□□□ -0.38
TYMSP1-201ENST00000407851 KIF27Q86VH2 1401 aa12.7□□□□□ -0.38
TYMSP1-201ENST00000407851 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
TYMSP1-201ENST00000407851 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
TYMSP1-201ENST00000407851 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
TYMSP1-201ENST00000407851 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
TYMSP1-201ENST00000407851 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
TYMSP1-201ENST00000407851 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
TYMSP1-201ENST00000407851 SHROOM2Q13796 1616 aa12.62□□□□□ -0.39
TYMSP1-201ENST00000407851 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
TYMSP1-201ENST00000407851 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
TYMSP1-201ENST00000407851 RUSC2Q8N2Y8 1516 aa12.59□□□□□ -0.39
TYMSP1-201ENST00000407851 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
TYMSP1-201ENST00000407851 KIAA0586Q9BVV6 1533 aa12.58□□□□□ -0.4
TYMSP1-201ENST00000407851 CUL7Q14999 1698 aa12.57□□□□□ -0.4
TYMSP1-201ENST00000407851 POTEMA6NI47 508 aa12.55□□□□□ -0.4
TYMSP1-201ENST00000407851 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
TYMSP1-201ENST00000407851 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
TYMSP1-201ENST00000407851 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
TYMSP1-201ENST00000407851 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
TYMSP1-201ENST00000407851 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
TYMSP1-201ENST00000407851 PTPRGP23470 1445 aa12.48□□□□□ -0.41
TYMSP1-201ENST00000407851 CARMIL2Q6F5E8 1435 aa12.46□□□□□ -0.41
TYMSP1-201ENST00000407851 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms