RNA–Protein interactions for RNA: ENST00000407851.1

TYMSP1-201, Transcript of thymidylate synthetase pseudogene 1, humanhuman

BASIC

Gene TYMSP1, Length 869 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP1-201ENST00000407851 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
TYMSP1-201ENST00000407851 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
TYMSP1-201ENST00000407851 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
TYMSP1-201ENST00000407851 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
TYMSP1-201ENST00000407851 FOXD1Q16676 465 aa20.42■□□□□ 0.86
TYMSP1-201ENST00000407851 POTEDQ86YR6 584 aa19.79■□□□□ 0.76
TYMSP1-201ENST00000407851 MSH5O43196 834 aa19.28■□□□□ 0.68
TYMSP1-201ENST00000407851 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
TYMSP1-201ENST00000407851 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.6
TYMSP1-201ENST00000407851 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
TYMSP1-201ENST00000407851 ADRA2BP18089 450 aa18.6■□□□□ 0.57
TYMSP1-201ENST00000407851 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.49
TYMSP1-201ENST00000407851 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
TYMSP1-201ENST00000407851 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
TYMSP1-201ENST00000407851 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
TYMSP1-201ENST00000407851 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
TYMSP1-201ENST00000407851 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
TYMSP1-201ENST00000407851 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
TYMSP1-201ENST00000407851 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
TYMSP1-201ENST00000407851 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
TYMSP1-201ENST00000407851 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
TYMSP1-201ENST00000407851 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
TYMSP1-201ENST00000407851 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
TYMSP1-201ENST00000407851 ABCC9O60706 1549 aa16.11■□□□□ 0.17
TYMSP1-201ENST00000407851 CCDC180Q9P1Z9 1646 aa16.08■□□□□ 0.16
TYMSP1-201ENST00000407851 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
TYMSP1-201ENST00000407851 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
TYMSP1-201ENST00000407851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
TYMSP1-201ENST00000407851 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
TYMSP1-201ENST00000407851 POTEHQ6S545 545 aa15.39■□□□□ 0.05
TYMSP1-201ENST00000407851 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
TYMSP1-201ENST00000407851 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
TYMSP1-201ENST00000407851 KCNA4P22459 653 aa15.27■□□□□ 0.04
TYMSP1-201ENST00000407851 NACADO15069 1562 aa15.24■□□□□ 0.03
TYMSP1-201ENST00000407851 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
TYMSP1-201ENST00000407851 CAPN15O75808 1086 aa15.19■□□□□ 0.02
TYMSP1-201ENST00000407851 DSG3P32926 999 aa15.19■□□□□ 0.02
TYMSP1-201ENST00000407851 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
TYMSP1-201ENST00000407851 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
TYMSP1-201ENST00000407851 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
TYMSP1-201ENST00000407851 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
TYMSP1-201ENST00000407851 APLP2Q06481 763 aa14.92□□□□□ -0.02
TYMSP1-201ENST00000407851 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
TYMSP1-201ENST00000407851 DCAF1Q9Y4B6 1507 aa14.9□□□□□ -0.02
TYMSP1-201ENST00000407851 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
TYMSP1-201ENST00000407851 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
TYMSP1-201ENST00000407851 ABCB7O75027 752 aa14.81□□□□□ -0.04
TYMSP1-201ENST00000407851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
TYMSP1-201ENST00000407851 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
TYMSP1-201ENST00000407851 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
TYMSP1-201ENST00000407851 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
TYMSP1-201ENST00000407851 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
TYMSP1-201ENST00000407851 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
TYMSP1-201ENST00000407851 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
TYMSP1-201ENST00000407851 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
TYMSP1-201ENST00000407851 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
TYMSP1-201ENST00000407851 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
TYMSP1-201ENST00000407851 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
TYMSP1-201ENST00000407851 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
TYMSP1-201ENST00000407851 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
TYMSP1-201ENST00000407851 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
TYMSP1-201ENST00000407851 POLA2Q14181 598 aa14.27□□□□□ -0.13
TYMSP1-201ENST00000407851 SP7Q8TDD2 431 aaPredicted RBP14.17□□□□□ -0.14
TYMSP1-201ENST00000407851 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
TYMSP1-201ENST00000407851 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
TYMSP1-201ENST00000407851 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
TYMSP1-201ENST00000407851 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
TYMSP1-201ENST00000407851 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
TYMSP1-201ENST00000407851 ZBTB22O15209 634 aa14.05□□□□□ -0.16
TYMSP1-201ENST00000407851 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
TYMSP1-201ENST00000407851 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
TYMSP1-201ENST00000407851 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
TYMSP1-201ENST00000407851 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
TYMSP1-201ENST00000407851 HMGXB3Q12766 1538 aa13.96□□□□□ -0.17
TYMSP1-201ENST00000407851 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.18
TYMSP1-201ENST00000407851 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
TYMSP1-201ENST00000407851 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
TYMSP1-201ENST00000407851 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
TYMSP1-201ENST00000407851 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
TYMSP1-201ENST00000407851 HAX1O00165 279 aa13.89□□□□□ -0.19
TYMSP1-201ENST00000407851 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
TYMSP1-201ENST00000407851 NESP48681 1621 aa13.86□□□□□ -0.19
TYMSP1-201ENST00000407851 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
TYMSP1-201ENST00000407851 PITPNM1O00562 1244 aa13.81□□□□□ -0.2
TYMSP1-201ENST00000407851 CUX2O14529 1486 aa13.77□□□□□ -0.21
TYMSP1-201ENST00000407851 WIZO95785 1651 aa13.77□□□□□ -0.21
TYMSP1-201ENST00000407851 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.21
TYMSP1-201ENST00000407851 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
TYMSP1-201ENST00000407851 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
TYMSP1-201ENST00000407851 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
TYMSP1-201ENST00000407851 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
TYMSP1-201ENST00000407851 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.22
TYMSP1-201ENST00000407851 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
TYMSP1-201ENST00000407851 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
TYMSP1-201ENST00000407851 EVX2Q03828 476 aa13.67□□□□□ -0.22
TYMSP1-201ENST00000407851 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
TYMSP1-201ENST00000407851 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
TYMSP1-201ENST00000407851 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
TYMSP1-201ENST00000407851 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
TYMSP1-201ENST00000407851 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms