RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 BAZ1BQ9UIG0 1483 aaKnown RBP10.33□□□□□ -0.76
GAPDHP42-201ENST00000406848 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
GAPDHP42-201ENST00000406848 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
GAPDHP42-201ENST00000406848 RSF1Q96T23 1441 aaPredicted RBP10.28□□□□□ -0.76
GAPDHP42-201ENST00000406848 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
GAPDHP42-201ENST00000406848 WIZO95785 1651 aa10.22□□□□□ -0.77
GAPDHP42-201ENST00000406848 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
GAPDHP42-201ENST00000406848 TOP2AP11388 1531 aaKnown RBP10.18□□□□□ -0.78
GAPDHP42-201ENST00000406848 LAMC3Q9Y6N6 1575 aa10.17□□□□□ -0.78
GAPDHP42-201ENST00000406848 MIER1Q8N108 512 aa10.15□□□□□ -0.78
GAPDHP42-201ENST00000406848 FARP1Q9Y4F1 1045 aaPredicted RBP10.15□□□□□ -0.78
GAPDHP42-201ENST00000406848 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
GAPDHP42-201ENST00000406848 PDS5BQ9NTI5 1447 aa10.13□□□□□ -0.79
GAPDHP42-201ENST00000406848 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
GAPDHP42-201ENST00000406848 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
GAPDHP42-201ENST00000406848 VASPP50552 380 aaPredicted RBP10.11□□□□□ -0.79
GAPDHP42-201ENST00000406848 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
GAPDHP42-201ENST00000406848 HAX1O00165 279 aa10.08□□□□□ -0.8
GAPDHP42-201ENST00000406848 CFTRP13569 1480 aa10.08□□□□□ -0.8
GAPDHP42-201ENST00000406848 CUX2O14529 1486 aa10.05□□□□□ -0.8
GAPDHP42-201ENST00000406848 NESP48681 1621 aa10.05□□□□□ -0.8
GAPDHP42-201ENST00000406848 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
GAPDHP42-201ENST00000406848 EVX2Q03828 476 aa10.05□□□□□ -0.8
GAPDHP42-201ENST00000406848 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
GAPDHP42-201ENST00000406848 C19orf67A6NJJ6 358 aa10.02□□□□□ -0.81
GAPDHP42-201ENST00000406848 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
GAPDHP42-201ENST00000406848 SUPT5HO00267 1087 aaKnown RBP9.99□□□□□ -0.81
GAPDHP42-201ENST00000406848 CD44P16070 742 aaKnown RBP9.99□□□□□ -0.81
GAPDHP42-201ENST00000406848 IFNLR1Q8IU57 520 aaPredicted RBP9.99□□□□□ -0.81
GAPDHP42-201ENST00000406848 FANCD2Q9BXW9 1451 aa9.98□□□□□ -0.81
GAPDHP42-201ENST00000406848 CEP164Q9UPV0 1460 aa9.98□□□□□ -0.81
GAPDHP42-201ENST00000406848 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
GAPDHP42-201ENST00000406848 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
GAPDHP42-201ENST00000406848 PRDM2Q13029 1718 aa9.96□□□□□ -0.82
GAPDHP42-201ENST00000406848 ZBTB47Q9UFB7 747 aaPredicted RBP9.95□□□□□ -0.82
GAPDHP42-201ENST00000406848 KIF21AQ7Z4S6 1674 aa9.94□□□□□ -0.82
GAPDHP42-201ENST00000406848 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
GAPDHP42-201ENST00000406848 THOC2Q8NI27 1593 aaKnown RBP9.94□□□□□ -0.82
GAPDHP42-201ENST00000406848 RASEFQ8IZ41 740 aa9.93□□□□□ -0.82
GAPDHP42-201ENST00000406848 WDR62O43379 1518 aa9.92□□□□□ -0.82
GAPDHP42-201ENST00000406848 NUBP1P53384 320 aa9.92□□□□□ -0.82
GAPDHP42-201ENST00000406848 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
GAPDHP42-201ENST00000406848 ZRANB1Q9UGI0 708 aa9.91□□□□□ -0.82
GAPDHP42-201ENST00000406848 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
GAPDHP42-201ENST00000406848 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
GAPDHP42-201ENST00000406848 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
GAPDHP42-201ENST00000406848 URB2Q14146 1524 aaKnown RBP9.84□□□□□ -0.83
GAPDHP42-201ENST00000406848 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
GAPDHP42-201ENST00000406848 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
GAPDHP42-201ENST00000406848 DNMBPQ6XZF7 1577 aa9.83□□□□□ -0.84
GAPDHP42-201ENST00000406848 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
GAPDHP42-201ENST00000406848 TOPBP1Q92547 1522 aa9.82□□□□□ -0.84
GAPDHP42-201ENST00000406848 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
GAPDHP42-201ENST00000406848 FAM212AQ96EL1 285 aa9.81□□□□□ -0.84
GAPDHP42-201ENST00000406848 IFT140Q96RY7 1462 aa9.8□□□□□ -0.84
GAPDHP42-201ENST00000406848 GABBR2O75899 941 aa9.79□□□□□ -0.84
GAPDHP42-201ENST00000406848 CIZ1Q9ULV3 898 aaPredicted RBP9.75□□□□□ -0.85
GAPDHP42-201ENST00000406848 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
GAPDHP42-201ENST00000406848 GALR2O43603 387 aaPredicted RBP9.73□□□□□ -0.85
GAPDHP42-201ENST00000406848 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
GAPDHP42-201ENST00000406848 SOGA1O94964 1423 aa9.73□□□□□ -0.85
GAPDHP42-201ENST00000406848 POLA1P09884 1462 aaPredicted RBP9.72□□□□□ -0.85
GAPDHP42-201ENST00000406848 MAP3K13O43283 966 aa9.72□□□□□ -0.85
GAPDHP42-201ENST00000406848 PYGBP11216 843 aa9.72□□□□□ -0.85
GAPDHP42-201ENST00000406848 GSE1Q14687 1217 aa9.72□□□□□ -0.85
GAPDHP42-201ENST00000406848 WRNQ14191 1432 aaPredicted RBP eCLIP9.72□□□□□ -0.85
GAPDHP42-201ENST00000406848 CUX1P39880 1505 aa9.72□□□□□ -0.85
GAPDHP42-201ENST00000406848 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
GAPDHP42-201ENST00000406848 DNAJC5Q9H3Z4 198 aa9.7□□□□□ -0.86
GAPDHP42-201ENST00000406848 FGD5Q6ZNL6 1462 aa9.7□□□□□ -0.86
GAPDHP42-201ENST00000406848 TARBP1Q13395 1621 aaKnown RBP9.69□□□□□ -0.86
GAPDHP42-201ENST00000406848 TOP2BQ02880 1626 aa9.68□□□□□ -0.86
GAPDHP42-201ENST00000406848 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
GAPDHP42-201ENST00000406848 ABCA10Q8WWZ4 1543 aa9.66□□□□□ -0.86
GAPDHP42-201ENST00000406848 CLCN6P51797 869 aa9.66□□□□□ -0.86
GAPDHP42-201ENST00000406848 PCDHB13Q9Y5F0 798 aa9.66□□□□□ -0.86
GAPDHP42-201ENST00000406848 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
GAPDHP42-201ENST00000406848 TRPC6Q9Y210 931 aa9.65□□□□□ -0.86
GAPDHP42-201ENST00000406848 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
GAPDHP42-201ENST00000406848 RAD54L2Q9Y4B4 1467 aa9.64□□□□□ -0.87
GAPDHP42-201ENST00000406848 IFNL1Q8IU54 200 aa9.63□□□□□ -0.87
GAPDHP42-201ENST00000406848 GRIN2BQ13224 1484 aa9.63□□□□□ -0.87
GAPDHP42-201ENST00000406848 EIF4G3O43432 1585 aaKnown RBP9.63□□□□□ -0.87
GAPDHP42-201ENST00000406848 AQRO60306 1485 aaKnown RBP eCLIP9.62□□□□□ -0.87
GAPDHP42-201ENST00000406848 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
GAPDHP42-201ENST00000406848 TDRD9Q8NDG6 1382 aaKnown RBP9.62□□□□□ -0.87
GAPDHP42-201ENST00000406848 MAGI1Q96QZ7 1491 aaPredicted RBP9.61□□□□□ -0.87
GAPDHP42-201ENST00000406848 CHRM1P11229 460 aaPredicted RBP9.61□□□□□ -0.87
GAPDHP42-201ENST00000406848 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
GAPDHP42-201ENST00000406848 GAPVD1Q14C86 1478 aa9.6□□□□□ -0.87
GAPDHP42-201ENST00000406848 SYNJ1O43426 1573 aa9.6□□□□□ -0.87
GAPDHP42-201ENST00000406848 PKD2Q13563 968 aa9.6□□□□□ -0.87
GAPDHP42-201ENST00000406848 DCBLD2Q96PD2 775 aa9.59□□□□□ -0.87
GAPDHP42-201ENST00000406848 SGIP1Q9BQI5 828 aa9.59□□□□□ -0.87
GAPDHP42-201ENST00000406848 ERICH3Q5RHP9 1530 aa9.56□□□□□ -0.88
GAPDHP42-201ENST00000406848 ABCA5Q8WWZ7 1642 aa9.56□□□□□ -0.88
GAPDHP42-201ENST00000406848 SYNJ2O15056 1496 aa9.56□□□□□ -0.88
GAPDHP42-201ENST00000406848 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
GAPDHP42-201ENST00000406848 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
GAPDHP42-201ENST00000406848 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms