RNA–Protein interactions for RNA: ENST00000402042.5

MKL1-203, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,343 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-203ENST00000402042 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
MKL1-203ENST00000402042 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
MKL1-203ENST00000402042 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
MKL1-203ENST00000402042 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
MKL1-203ENST00000402042 HIRIP3Q9BW71 556 aaPredicted RBP19.21■□□□□ 0.67
MKL1-203ENST00000402042 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
MKL1-203ENST00000402042 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
MKL1-203ENST00000402042 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
MKL1-203ENST00000402042 IGF1RP08069 1367 aa19.17■□□□□ 0.66
MKL1-203ENST00000402042 BCANQ96GW7 911 aa19.16■□□□□ 0.66
MKL1-203ENST00000402042 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
MKL1-203ENST00000402042 FMN1Q68DA7 1419 aa19.15■□□□□ 0.66
MKL1-203ENST00000402042 CFTRP13569 1480 aa19.15■□□□□ 0.66
MKL1-203ENST00000402042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.666e-6■□□□□ 8.3
MKL1-203ENST00000402042 FHOD3Q2V2M9 1422 aa19.14■□□□□ 0.65
MKL1-203ENST00000402042 NPM1P06748 294 aaKnown RBP eCLIP19.14■□□□□ 0.65
MKL1-203ENST00000402042 ARHGAP35Q9NRY4 1499 aa19.12■□□□□ 0.65
MKL1-203ENST00000402042 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
MKL1-203ENST00000402042 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
MKL1-203ENST00000402042 SETD5Q9C0A6 1442 aa19.09■□□□□ 0.65
MKL1-203ENST00000402042 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
MKL1-203ENST00000402042 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
MKL1-203ENST00000402042 KDM2AQ9Y2K7 1162 aa19.05■□□□□ 0.64
MKL1-203ENST00000402042 RAB3GAP2Q9H2M9 1393 aa19.04■□□□□ 0.64
MKL1-203ENST00000402042 KIF21BO75037 1637 aa19.03■□□□□ 0.64
MKL1-203ENST00000402042 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
MKL1-203ENST00000402042 UNC13AQ9UPW8 1703 aa19.02■□□□□ 0.64
MKL1-203ENST00000402042 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.63
MKL1-203ENST00000402042 TOP2BQ02880 1626 aa18.99■□□□□ 0.63
MKL1-203ENST00000402042 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
MKL1-203ENST00000402042 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
MKL1-203ENST00000402042 CUX1P39880 1505 aa18.97■□□□□ 0.63
MKL1-203ENST00000402042 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
MKL1-203ENST00000402042 FAM9BQ8IZU0 186 aa18.96■□□□□ 0.63
MKL1-203ENST00000402042 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
MKL1-203ENST00000402042 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.62
MKL1-203ENST00000402042 CARMIL2Q6F5E8 1435 aa18.95■□□□□ 0.62
MKL1-203ENST00000402042 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
MKL1-203ENST00000402042 ERICH3Q5RHP9 1530 aa18.94■□□□□ 0.62
MKL1-203ENST00000402042 NESP48681 1621 aa18.93■□□□□ 0.62
MKL1-203ENST00000402042 FKBP8Q14318 412 aa18.9■□□□□ 0.62
MKL1-203ENST00000402042 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
MKL1-203ENST00000402042 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
MKL1-203ENST00000402042 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
MKL1-203ENST00000402042 RGL3Q3MIN7 710 aa18.88■□□□□ 0.61
MKL1-203ENST00000402042 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
MKL1-203ENST00000402042 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
MKL1-203ENST00000402042 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
MKL1-203ENST00000402042 FOXD1Q16676 465 aa18.81■□□□□ 0.6
MKL1-203ENST00000402042 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.64e-6■□□□□ 10.8
MKL1-203ENST00000402042 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
MKL1-203ENST00000402042 MPHOSPH9Q99550 1183 aa18.79■□□□□ 0.6
MKL1-203ENST00000402042 CCDC18Q5T9S5 1454 aa18.78■□□□□ 0.6
MKL1-203ENST00000402042 MYT1Q01538 1121 aa18.78■□□□□ 0.6
MKL1-203ENST00000402042 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
MKL1-203ENST00000402042 CARD11Q9BXL7 1154 aa18.78■□□□□ 0.6
MKL1-203ENST00000402042 PPP1R15AO75807 674 aaPredicted RBP18.77■□□□□ 0.6
MKL1-203ENST00000402042 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
MKL1-203ENST00000402042 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
MKL1-203ENST00000402042 PHLDB1Q86UU1 1377 aa18.76■□□□□ 0.59
MKL1-203ENST00000402042 LRRC9Q6ZRR7 1453 aa18.75■□□□□ 0.59
MKL1-203ENST00000402042 SALL2Q9Y467 1007 aaPredicted RBP18.74■□□□□ 0.59
MKL1-203ENST00000402042 PKD2Q13563 968 aa18.74■□□□□ 0.59
MKL1-203ENST00000402042 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
MKL1-203ENST00000402042 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
MKL1-203ENST00000402042 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
MKL1-203ENST00000402042 ANKRD30AQ9BXX3 1397 aa18.69■□□□□ 0.58
MKL1-203ENST00000402042 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
MKL1-203ENST00000402042 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
MKL1-203ENST00000402042 FGD6Q6ZV73 1430 aa18.67■□□□□ 0.58
MKL1-203ENST00000402042 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
MKL1-203ENST00000402042 NUP155O75694 1391 aa18.66■□□□□ 0.58
MKL1-203ENST00000402042 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
MKL1-203ENST00000402042 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.574e-7■■■■□ 22.9
MKL1-203ENST00000402042 L3MBTL2Q969R5 705 aa18.64■□□□□ 0.57
MKL1-203ENST00000402042 EFCAB2Q5VUJ9 269 aa18.63■□□□□ 0.57
MKL1-203ENST00000402042 MYOM3Q5VTT5 1437 aa18.63■□□□□ 0.57
MKL1-203ENST00000402042 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
MKL1-203ENST00000402042 FYCO1Q9BQS8 1478 aa18.62■□□□□ 0.57
MKL1-203ENST00000402042 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
MKL1-203ENST00000402042 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
MKL1-203ENST00000402042 PTPRGP23470 1445 aa18.61■□□□□ 0.57
MKL1-203ENST00000402042 IRX6P78412 446 aaPredicted RBP18.61■□□□□ 0.57
MKL1-203ENST00000402042 NEFMP07197 916 aa18.6■□□□□ 0.57
MKL1-203ENST00000402042 EFCAB5A4FU69 1503 aa18.59■□□□□ 0.57
MKL1-203ENST00000402042 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
MKL1-203ENST00000402042 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.57
MKL1-203ENST00000402042 CCER2I3L3R5 266 aa18.58■□□□□ 0.57
MKL1-203ENST00000402042 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
MKL1-203ENST00000402042 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
MKL1-203ENST00000402042 RSPH4AQ5TD94 716 aa18.56■□□□□ 0.56
MKL1-203ENST00000402042 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
MKL1-203ENST00000402042 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
MKL1-203ENST00000402042 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
MKL1-203ENST00000402042 CDCA8Q53HL2 280 aa18.54■□□□□ 0.56
MKL1-203ENST00000402042 IFT140Q96RY7 1462 aa18.54■□□□□ 0.56
MKL1-203ENST00000402042 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
MKL1-203ENST00000402042 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
MKL1-203ENST00000402042 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
MKL1-203ENST00000402042 CCDC136Q96JN2 1154 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms