RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CLSPNQ9HAW4 1339 aa11.03□□□□□ -0.64
HDAC9-201ENST00000401921 PRKCSHP14314 528 aaPredicted RBP11□□□□□ -0.65
HDAC9-201ENST00000401921 DDX10Q13206 875 aaKnown RBP11□□□□□ -0.65
HDAC9-201ENST00000401921 RAB3GAP2Q9H2M9 1393 aa11□□□□□ -0.65
HDAC9-201ENST00000401921 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
HDAC9-201ENST00000401921 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
HDAC9-201ENST00000401921 FHOD3Q2V2M9 1422 aa10.98□□□□□ -0.65
HDAC9-201ENST00000401921 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
HDAC9-201ENST00000401921 MTUS2Q5JR59 1369 aa10.97□□□□□ -0.65
HDAC9-201ENST00000401921 TRIM52Q96A61 297 aa10.96□□□□□ -0.65
HDAC9-201ENST00000401921 FHAD1B1AJZ9 1412 aa10.96□□□□□ -0.65
HDAC9-201ENST00000401921 CHIC2Q9UKJ5 165 aa10.96□□□□□ -0.66
HDAC9-201ENST00000401921 NESP48681 1621 aa10.95□□□□□ -0.66
HDAC9-201ENST00000401921 CC2D2AQ9P2K1 1620 aa10.94□□□□□ -0.66
HDAC9-201ENST00000401921 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
HDAC9-201ENST00000401921 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
HDAC9-201ENST00000401921 PHLDB1Q86UU1 1377 aa10.93□□□□□ -0.66
HDAC9-201ENST00000401921 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
HDAC9-201ENST00000401921 BCANQ96GW7 911 aa10.9□□□□□ -0.66
HDAC9-201ENST00000401921 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
HDAC9-201ENST00000401921 TONSLQ96HA7 1378 aa10.9□□□□□ -0.67
HDAC9-201ENST00000401921 LRRC9Q6ZRR7 1453 aa10.89□□□□□ -0.67
HDAC9-201ENST00000401921 FBLN2P98095 1184 aa10.89□□□□□ -0.67
HDAC9-201ENST00000401921 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
HDAC9-201ENST00000401921 ANP32CO43423 234 aa10.87□□□□□ -0.67
HDAC9-201ENST00000401921 CNGB1Q14028 1251 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-201ENST00000401921 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-201ENST00000401921 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
HDAC9-201ENST00000401921 TOPBP1Q92547 1522 aa10.85□□□□□ -0.67
HDAC9-201ENST00000401921 NEFLP07196 543 aa10.85□□□□□ -0.67
HDAC9-201ENST00000401921 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
HDAC9-201ENST00000401921 FMN1Q68DA7 1419 aa10.83□□□□□ -0.68
HDAC9-201ENST00000401921 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
HDAC9-201ENST00000401921 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
HDAC9-201ENST00000401921 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-201ENST00000401921 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-201ENST00000401921 ANP32EQ9BTT0 268 aa10.8□□□□□ -0.68
HDAC9-201ENST00000401921 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
HDAC9-201ENST00000401921 GAPVD1Q14C86 1478 aa10.8□□□□□ -0.68
HDAC9-201ENST00000401921 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
HDAC9-201ENST00000401921 SUPT16HQ9Y5B9 1047 aaKnown RBP10.79□□□□□ -0.68
HDAC9-201ENST00000401921 FKBP8Q14318 412 aa10.79□□□□□ -0.68
HDAC9-201ENST00000401921 ABCA10Q8WWZ4 1543 aa10.79□□□□□ -0.68
HDAC9-201ENST00000401921 CASKIN1Q8WXD9 1431 aa10.78□□□□□ -0.68
HDAC9-201ENST00000401921 ZNF326Q5BKZ1 582 aaKnown RBP10.77□□□□□ -0.68
HDAC9-201ENST00000401921 FOXD1Q16676 465 aa10.77□□□□□ -0.69
HDAC9-201ENST00000401921 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
HDAC9-201ENST00000401921 TIMELESSQ9UNS1 1208 aa10.76□□□□□ -0.69
HDAC9-201ENST00000401921 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
HDAC9-201ENST00000401921 PRDM2Q13029 1718 aa10.74□□□□□ -0.69
HDAC9-201ENST00000401921 URB2Q14146 1524 aaKnown RBP10.74□□□□□ -0.69
HDAC9-201ENST00000401921 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC9-201ENST00000401921 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
HDAC9-201ENST00000401921 MAP3K1Q13233 1512 aa10.73□□□□□ -0.69
HDAC9-201ENST00000401921 CHMP7Q8WUX9 453 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-201ENST00000401921 CDK11AQ9UQ88 783 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-201ENST00000401921 CCDC18Q5T9S5 1454 aa10.73□□□□□ -0.69
HDAC9-201ENST00000401921 MAPKBP1O60336 1514 aa10.72□□□□□ -0.69
HDAC9-201ENST00000401921 HNRNPUQ00839 825 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDAC9-201ENST00000401921 EFCAB5A4FU69 1503 aa10.71□□□□□ -0.69
HDAC9-201ENST00000401921 SLC4A1APQ9BWU0 796 aaKnown RBP10.71□□□□□ -0.69
HDAC9-201ENST00000401921 NCOA2Q15596 1464 aa10.71□□□□□ -0.7
HDAC9-201ENST00000401921 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
HDAC9-201ENST00000401921 MYOM3Q5VTT5 1437 aa10.69□□□□□ -0.7
HDAC9-201ENST00000401921 MPHOSPH9Q99550 1183 aa10.68□□□□□ -0.7
HDAC9-201ENST00000401921 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
HDAC9-201ENST00000401921 FAM9BQ8IZU0 186 aa10.68□□□□□ -0.7
HDAC9-201ENST00000401921 CUL7Q14999 1698 aa10.67□□□□□ -0.7
HDAC9-201ENST00000401921 LAMC3Q9Y6N6 1575 aa10.67□□□□□ -0.7
HDAC9-201ENST00000401921 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-201ENST00000401921 CFDP1Q9UEE9 299 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-201ENST00000401921 PTPRKQ15262 1439 aa10.66□□□□□ -0.7
HDAC9-201ENST00000401921 ZNF644Q9H582 1327 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-201ENST00000401921 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
HDAC9-201ENST00000401921 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
HDAC9-201ENST00000401921 CCER2I3L3R5 266 aa10.64□□□□□ -0.71
HDAC9-201ENST00000401921 NAIPQ13075 1403 aa10.63□□□□□ -0.71
HDAC9-201ENST00000401921 CFAP43Q8NDM7 1665 aa10.63□□□□□ -0.71
HDAC9-201ENST00000401921 SLC24A1O60721 1099 aa10.63□□□□□ -0.71
HDAC9-201ENST00000401921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.63□□□□□ -0.71
HDAC9-201ENST00000401921 HFM1A2PYH4 1435 aa10.63□□□□□ -0.71
HDAC9-201ENST00000401921 CTTNBP2Q8WZ74 1663 aa10.62□□□□□ -0.71
HDAC9-201ENST00000401921 ERCC6Q03468 1493 aa10.62□□□□□ -0.71
HDAC9-201ENST00000401921 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
HDAC9-201ENST00000401921 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
HDAC9-201ENST00000401921 KDM2AQ9Y2K7 1162 aa10.61□□□□□ -0.71
HDAC9-201ENST00000401921 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
HDAC9-201ENST00000401921 CDK13Q14004 1512 aaKnown RBP10.6□□□□□ -0.71
HDAC9-201ENST00000401921 PLEKHD1A6NEE1 506 aa10.6□□□□□ -0.71
HDAC9-201ENST00000401921 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
HDAC9-201ENST00000401921 EHBP1L1Q8N3D4 1523 aa10.58□□□□□ -0.72
HDAC9-201ENST00000401921 TSPY4P0CV99 314 aa10.58□□□□□ -0.72
HDAC9-201ENST00000401921 TSPY10P0CW01 314 aa10.58□□□□□ -0.72
HDAC9-201ENST00000401921 GRIN2BQ13224 1484 aa10.58□□□□□ -0.72
HDAC9-201ENST00000401921 TSHZ2Q9NRE2 1034 aa10.58□□□□□ -0.72
HDAC9-201ENST00000401921 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
HDAC9-201ENST00000401921 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
HDAC9-201ENST00000401921 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
HDAC9-201ENST00000401921 PTPN23Q9H3S7 1636 aa10.56□□□□□ -0.72
HDAC9-201ENST00000401921 ZNF608Q9ULD9 1512 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms