RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
RERE-203ENST00000400907 CARMIL1Q5VZK9 1371 aa12.1□□□□□ -0.47
RERE-203ENST00000400907 GAPVD1Q14C86 1478 aa12.1□□□□□ -0.47
RERE-203ENST00000400907 RAPGEF2Q9Y4G8 1499 aa12.09□□□□□ -0.47
RERE-203ENST00000400907 IFT140Q96RY7 1462 aa12.08□□□□□ -0.47
RERE-203ENST00000400907 SENP3Q9H4L4 574 aaPredicted RBP12.06□□□□□ -0.48
RERE-203ENST00000400907 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
RERE-203ENST00000400907 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
RERE-203ENST00000400907 CENPBP07199 599 aaPredicted RBP12.04□□□□□ -0.48
RERE-203ENST00000400907 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
RERE-203ENST00000400907 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
RERE-203ENST00000400907 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
RERE-203ENST00000400907 PRXQ9BXM0 1461 aa12.02□□□□□ -0.49
RERE-203ENST00000400907 P3H3Q8IVL6 736 aa12.02□□□□□ -0.49
RERE-203ENST00000400907 KIF21BO75037 1637 aa12.01□□□□□ -0.49
RERE-203ENST00000400907 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
RERE-203ENST00000400907 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
RERE-203ENST00000400907 SNAPC4Q5SXM2 1469 aa11.97□□□□□ -0.49
RERE-203ENST00000400907 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.49
RERE-203ENST00000400907 CEP162Q5TB80 1403 aa11.96□□□□□ -0.5
RERE-203ENST00000400907 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.5
RERE-203ENST00000400907 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
RERE-203ENST00000400907 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
RERE-203ENST00000400907 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
RERE-203ENST00000400907 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
RERE-203ENST00000400907 FHAD1B1AJZ9 1412 aa11.93□□□□□ -0.5
RERE-203ENST00000400907 CLIP1P30622 1438 aa11.92□□□□□ -0.5
RERE-203ENST00000400907 YTHDC1Q96MU7 727 aaKnown RBP11.9□□□□□ -0.5
RERE-203ENST00000400907 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
RERE-203ENST00000400907 CUL7Q14999 1698 aa11.86□□□□□ -0.51
RERE-203ENST00000400907 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
RERE-203ENST00000400907 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
RERE-203ENST00000400907 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
RERE-203ENST00000400907 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
RERE-203ENST00000400907 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
RERE-203ENST00000400907 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
RERE-203ENST00000400907 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
RERE-203ENST00000400907 APLP2Q06481 763 aa11.82□□□□□ -0.52
RERE-203ENST00000400907 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
RERE-203ENST00000400907 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
RERE-203ENST00000400907 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
RERE-203ENST00000400907 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
RERE-203ENST00000400907 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
RERE-203ENST00000400907 MIER1Q8N108 512 aa11.77□□□□□ -0.52
RERE-203ENST00000400907 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
RERE-203ENST00000400907 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
RERE-203ENST00000400907 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
RERE-203ENST00000400907 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
RERE-203ENST00000400907 IQGAP2Q13576 1575 aa11.73□□□□□ -0.53
RERE-203ENST00000400907 NUP160Q12769 1436 aa11.73□□□□□ -0.53
RERE-203ENST00000400907 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
RERE-203ENST00000400907 CHD1O14646 1710 aa11.71□□□□□ -0.54
RERE-203ENST00000400907 PRG4Q92954 1404 aaPredicted RBP11.7□□□□□ -0.54
RERE-203ENST00000400907 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
RERE-203ENST00000400907 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
RERE-203ENST00000400907 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
RERE-203ENST00000400907 DISP1Q96F81 1524 aa11.65□□□□□ -0.54
RERE-203ENST00000400907 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
RERE-203ENST00000400907 UGGT2Q9NYU1 1516 aa11.63□□□□□ -0.55
RERE-203ENST00000400907 PTPRGP23470 1445 aa11.63□□□□□ -0.55
RERE-203ENST00000400907 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
RERE-203ENST00000400907 FKBP8Q14318 412 aa11.62□□□□□ -0.55
RERE-203ENST00000400907 ITGAEP38570 1179 aa11.61□□□□□ -0.55
RERE-203ENST00000400907 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
RERE-203ENST00000400907 PLB1Q6P1J6 1458 aa11.6□□□□□ -0.55
RERE-203ENST00000400907 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
RERE-203ENST00000400907 TIMELESSQ9UNS1 1208 aa11.59□□□□□ -0.55
RERE-203ENST00000400907 SAMD9Q5K651 1589 aa11.59□□□□□ -0.55
RERE-203ENST00000400907 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
RERE-203ENST00000400907 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
RERE-203ENST00000400907 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.55
RERE-203ENST00000400907 PCF11O94913 1555 aaKnown RBP11.57□□□□□ -0.56
RERE-203ENST00000400907 CASKIN1Q8WXD9 1431 aa11.57□□□□□ -0.56
RERE-203ENST00000400907 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
RERE-203ENST00000400907 MAP3K1Q13233 1512 aa11.55□□□□□ -0.56
RERE-203ENST00000400907 BCL11AQ9H165 835 aa11.55□□□□□ -0.56
RERE-203ENST00000400907 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
RERE-203ENST00000400907 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
RERE-203ENST00000400907 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
RERE-203ENST00000400907 ANP32EQ9BTT0 268 aa11.54□□□□□ -0.56
RERE-203ENST00000400907 CDK13Q14004 1512 aaKnown RBP11.53□□□□□ -0.56
RERE-203ENST00000400907 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
RERE-203ENST00000400907 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.56
RERE-203ENST00000400907 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
RERE-203ENST00000400907 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
RERE-203ENST00000400907 DAXXQ9UER7 740 aaPredicted RBP11.51□□□□□ -0.57
RERE-203ENST00000400907 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
RERE-203ENST00000400907 NUP153P49790 1475 aaKnown RBP11.5□□□□□ -0.57
RERE-203ENST00000400907 EPRSP07814 1512 aaKnown RBP11.5□□□□□ -0.57
RERE-203ENST00000400907 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
RERE-203ENST00000400907 LRRC9Q6ZRR7 1453 aa11.49□□□□□ -0.57
RERE-203ENST00000400907 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57
RERE-203ENST00000400907 PLCB2Q00722 1185 aa11.49□□□□□ -0.57
RERE-203ENST00000400907 TIAM1Q13009 1591 aa11.48□□□□□ -0.57
RERE-203ENST00000400907 SHROOM2Q13796 1616 aa11.47□□□□□ -0.57
RERE-203ENST00000400907 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
RERE-203ENST00000400907 RAPGEF6Q8TEU7 1601 aa11.46□□□□□ -0.57
RERE-203ENST00000400907 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.57
RERE-203ENST00000400907 FOXD1Q16676 465 aa11.46□□□□□ -0.57
RERE-203ENST00000400907 ATP10BO94823 1461 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms