RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
CFAP53-201ENST00000398545 PCF11O94913 1555 aaKnown RBP22.13■■□□□ 1.13
CFAP53-201ENST00000398545 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CFAP53-201ENST00000398545 CUL7Q14999 1698 aa22.12■■□□□ 1.13
CFAP53-201ENST00000398545 RAB3GAP2Q9H2M9 1393 aa22.11■■□□□ 1.13
CFAP53-201ENST00000398545 DNMBPQ6XZF7 1577 aa22.1■■□□□ 1.13
CFAP53-201ENST00000398545 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
CFAP53-201ENST00000398545 FYCO1Q9BQS8 1478 aa22.07■■□□□ 1.12
CFAP53-201ENST00000398545 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.12
CFAP53-201ENST00000398545 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
CFAP53-201ENST00000398545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
CFAP53-201ENST00000398545 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.12
CFAP53-201ENST00000398545 PHLDB1Q86UU1 1377 aa22.01■■□□□ 1.11
CFAP53-201ENST00000398545 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
CFAP53-201ENST00000398545 TIMELESSQ9UNS1 1208 aa21.97■■□□□ 1.11
CFAP53-201ENST00000398545 CASKIN1Q8WXD9 1431 aa21.97■■□□□ 1.11
CFAP53-201ENST00000398545 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
CFAP53-201ENST00000398545 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
CFAP53-201ENST00000398545 ITGAEP38570 1179 aa21.92■■□□□ 1.1
CFAP53-201ENST00000398545 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
CFAP53-201ENST00000398545 FMN1Q68DA7 1419 aa21.88■■□□□ 1.09
CFAP53-201ENST00000398545 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
CFAP53-201ENST00000398545 FHOD3Q2V2M9 1422 aa21.87■■□□□ 1.09
CFAP53-201ENST00000398545 SAMD9Q5K651 1589 aa21.86■■□□□ 1.09
CFAP53-201ENST00000398545 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
CFAP53-201ENST00000398545 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
CFAP53-201ENST00000398545 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
CFAP53-201ENST00000398545 SUPT16HQ9Y5B9 1047 aaKnown RBP21.83■■□□□ 1.09
CFAP53-201ENST00000398545 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.09
CFAP53-201ENST00000398545 LRRIQ1Q96JM4 1722 aa21.81■■□□□ 1.08
CFAP53-201ENST00000398545 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
CFAP53-201ENST00000398545 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
CFAP53-201ENST00000398545 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
CFAP53-201ENST00000398545 PTPN23Q9H3S7 1636 aa21.75■■□□□ 1.07
CFAP53-201ENST00000398545 HFM1A2PYH4 1435 aa21.74■■□□□ 1.07
CFAP53-201ENST00000398545 EHBP1L1Q8N3D4 1523 aa21.73■■□□□ 1.07
CFAP53-201ENST00000398545 CCDC18Q5T9S5 1454 aa21.73■■□□□ 1.07
CFAP53-201ENST00000398545 UACAQ9BZF9 1416 aa21.71■■□□□ 1.07
CFAP53-201ENST00000398545 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
CFAP53-201ENST00000398545 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
CFAP53-201ENST00000398545 P3H3Q8IVL6 736 aa21.69■■□□□ 1.06
CFAP53-201ENST00000398545 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
CFAP53-201ENST00000398545 SIN3AQ96ST3 1273 aa21.69■■□□□ 1.06
CFAP53-201ENST00000398545 NESP48681 1621 aa21.68■■□□□ 1.06
CFAP53-201ENST00000398545 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
CFAP53-201ENST00000398545 MTUS2Q5JR59 1369 aa21.67■■□□□ 1.06
CFAP53-201ENST00000398545 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
CFAP53-201ENST00000398545 CCER2I3L3R5 266 aa21.64■■□□□ 1.06
CFAP53-201ENST00000398545 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.06
CFAP53-201ENST00000398545 ARHGEF11O15085 1522 aa21.64■■□□□ 1.06
CFAP53-201ENST00000398545 NCOA2Q15596 1464 aa21.64■■□□□ 1.06
CFAP53-201ENST00000398545 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.05
CFAP53-201ENST00000398545 UGGT2Q9NYU1 1516 aa21.63■■□□□ 1.05
CFAP53-201ENST00000398545 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
CFAP53-201ENST00000398545 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
CFAP53-201ENST00000398545 DDX10Q13206 875 aaKnown RBP21.6■■□□□ 1.05
CFAP53-201ENST00000398545 NAIPQ13075 1403 aa21.6■■□□□ 1.05
CFAP53-201ENST00000398545 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
CFAP53-201ENST00000398545 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
CFAP53-201ENST00000398545 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
CFAP53-201ENST00000398545 AKNAQ7Z591 1439 aa21.57■■□□□ 1.04
CFAP53-201ENST00000398545 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
CFAP53-201ENST00000398545 KCNH8Q96L42 1107 aa21.56■■□□□ 1.04
CFAP53-201ENST00000398545 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
CFAP53-201ENST00000398545 KDM5BQ9UGL1 1544 aa21.53■■□□□ 1.04
CFAP53-201ENST00000398545 ANP32CO43423 234 aa21.53■■□□□ 1.04
CFAP53-201ENST00000398545 TSHZ2Q9NRE2 1034 aa21.49■■□□□ 1.03
CFAP53-201ENST00000398545 IQGAP2Q13576 1575 aa21.49■■□□□ 1.03
CFAP53-201ENST00000398545 MAGI3Q5TCQ9 1506 aa21.48■■□□□ 1.03
CFAP53-201ENST00000398545 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
CFAP53-201ENST00000398545 MIA2Q96PC5 1412 aa21.45■■□□□ 1.02
CFAP53-201ENST00000398545 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
CFAP53-201ENST00000398545 WDR62O43379 1518 aa21.41■■□□□ 1.02
CFAP53-201ENST00000398545 NEFLP07196 543 aa21.41■■□□□ 1.02
CFAP53-201ENST00000398545 EPRSP07814 1512 aaKnown RBP21.41■■□□□ 1.02
CFAP53-201ENST00000398545 POLR1AO95602 1720 aaPredicted RBP21.4■■□□□ 1.02
CFAP53-201ENST00000398545 FKBP8Q14318 412 aa21.37■■□□□ 1.01
CFAP53-201ENST00000398545 DENND4BO75064 1496 aaPredicted RBP21.36■■□□□ 1.01
CFAP53-201ENST00000398545 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
CFAP53-201ENST00000398545 KDM6BO15054 1643 aa21.33■■□□□ 1.01
CFAP53-201ENST00000398545 DNMT1P26358 1616 aaKnown RBP21.33■■□□□ 1
CFAP53-201ENST00000398545 ROCK1Q13464 1354 aa21.29■■□□□ 1
CFAP53-201ENST00000398545 CDK13Q14004 1512 aaKnown RBP21.28■■□□□ 1
CFAP53-201ENST00000398545 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
CFAP53-201ENST00000398545 KIAA0556O60303 1618 aa21.25■□□□□ 0.99
CFAP53-201ENST00000398545 CNTLNQ9NXG0 1405 aa21.25■□□□□ 0.99
CFAP53-201ENST00000398545 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
CFAP53-201ENST00000398545 BCANQ96GW7 911 aa21.24■□□□□ 0.99
CFAP53-201ENST00000398545 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
CFAP53-201ENST00000398545 ADGBQ8N7X0 1667 aa21.22■□□□□ 0.99
CFAP53-201ENST00000398545 ITSN2Q9NZM3 1697 aa21.22■□□□□ 0.99
CFAP53-201ENST00000398545 RPRD2Q5VT52 1461 aaKnown RBP21.22■□□□□ 0.99
CFAP53-201ENST00000398545 DAPK1P53355 1430 aa21.22■□□□□ 0.99
CFAP53-201ENST00000398545 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
CFAP53-201ENST00000398545 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
CFAP53-201ENST00000398545 WASHC2AQ641Q2 1341 aa21.21■□□□□ 0.99
CFAP53-201ENST00000398545 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.98
CFAP53-201ENST00000398545 ANP32EQ9BTT0 268 aa21.2■□□□□ 0.98
CFAP53-201ENST00000398545 NCOA1Q15788 1441 aa21.2■□□□□ 0.98
CFAP53-201ENST00000398545 TEX14Q8IWB6 1497 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms