RNA–Protein interactions for RNA: ENST00000398469.5

KRT42P-201, Transcript of keratin 42 pseudogene, humanhuman

TSL 2 BASIC

Gene KRT42P, Length 2,864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT42P-201ENST00000398469 HIRIP3Q9BW71 556 aaPredicted RBP19.15■□□□□ 0.66
KRT42P-201ENST00000398469 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
KRT42P-201ENST00000398469 PHLDB1Q86UU1 1377 aa19.13■□□□□ 0.65
KRT42P-201ENST00000398469 NESP48681 1621 aa19.1■□□□□ 0.65
KRT42P-201ENST00000398469 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
KRT42P-201ENST00000398469 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.65
KRT42P-201ENST00000398469 CLSPNQ9HAW4 1339 aa19.06■□□□□ 0.64
KRT42P-201ENST00000398469 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
KRT42P-201ENST00000398469 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
KRT42P-201ENST00000398469 TIAM1Q13009 1591 aa19.02■□□□□ 0.64
KRT42P-201ENST00000398469 LRRC9Q6ZRR7 1453 aa19.01■□□□□ 0.63
KRT42P-201ENST00000398469 MAPKBP1O60336 1514 aa19■□□□□ 0.63
KRT42P-201ENST00000398469 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
KRT42P-201ENST00000398469 SETD5Q9C0A6 1442 aa18.96■□□□□ 0.63
KRT42P-201ENST00000398469 PCF11O94913 1555 aaKnown RBP18.96■□□□□ 0.63
KRT42P-201ENST00000398469 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
KRT42P-201ENST00000398469 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
KRT42P-201ENST00000398469 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
KRT42P-201ENST00000398469 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
KRT42P-201ENST00000398469 DAXXQ9UER7 740 aaPredicted RBP18.91■□□□□ 0.62
KRT42P-201ENST00000398469 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
KRT42P-201ENST00000398469 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.61
KRT42P-201ENST00000398469 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
KRT42P-201ENST00000398469 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
KRT42P-201ENST00000398469 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
KRT42P-201ENST00000398469 BCANQ96GW7 911 aa18.86■□□□□ 0.61
KRT42P-201ENST00000398469 CHIC2Q9UKJ5 165 aa18.82■□□□□ 0.6
KRT42P-201ENST00000398469 ABCA10Q8WWZ4 1543 aa18.81■□□□□ 0.6
KRT42P-201ENST00000398469 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
KRT42P-201ENST00000398469 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
KRT42P-201ENST00000398469 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
KRT42P-201ENST00000398469 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
KRT42P-201ENST00000398469 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
KRT42P-201ENST00000398469 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
KRT42P-201ENST00000398469 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
KRT42P-201ENST00000398469 CASKIN1Q8WXD9 1431 aa18.75■□□□□ 0.59
KRT42P-201ENST00000398469 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
KRT42P-201ENST00000398469 CFAP43Q8NDM7 1665 aa18.75■□□□□ 0.59
KRT42P-201ENST00000398469 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
KRT42P-201ENST00000398469 FGD6Q6ZV73 1430 aa18.72■□□□□ 0.59
KRT42P-201ENST00000398469 SNAPC4Q5SXM2 1469 aa18.68■□□□□ 0.58
KRT42P-201ENST00000398469 FOXD1Q16676 465 aa18.68■□□□□ 0.58
KRT42P-201ENST00000398469 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.58
KRT42P-201ENST00000398469 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
KRT42P-201ENST00000398469 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
KRT42P-201ENST00000398469 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
KRT42P-201ENST00000398469 CCDC18Q5T9S5 1454 aa18.66■□□□□ 0.58
KRT42P-201ENST00000398469 FKBP8Q14318 412 aa18.65■□□□□ 0.58
KRT42P-201ENST00000398469 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
KRT42P-201ENST00000398469 NCOA2Q15596 1464 aa18.64■□□□□ 0.57
KRT42P-201ENST00000398469 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.57
KRT42P-201ENST00000398469 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.57
KRT42P-201ENST00000398469 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
KRT42P-201ENST00000398469 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
KRT42P-201ENST00000398469 CUL7Q14999 1698 aa18.6■□□□□ 0.57
KRT42P-201ENST00000398469 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
KRT42P-201ENST00000398469 ANP32CO43423 234 aa18.59■□□□□ 0.57
KRT42P-201ENST00000398469 TSHZ2Q9NRE2 1034 aa18.59■□□□□ 0.57
KRT42P-201ENST00000398469 NAIPQ13075 1403 aa18.59■□□□□ 0.57
KRT42P-201ENST00000398469 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
KRT42P-201ENST00000398469 HFM1A2PYH4 1435 aa18.55■□□□□ 0.56
KRT42P-201ENST00000398469 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
KRT42P-201ENST00000398469 CNGB1Q14028 1251 aaPredicted RBP18.54■□□□□ 0.56
KRT42P-201ENST00000398469 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
KRT42P-201ENST00000398469 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
KRT42P-201ENST00000398469 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
KRT42P-201ENST00000398469 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
KRT42P-201ENST00000398469 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
KRT42P-201ENST00000398469 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
KRT42P-201ENST00000398469 KCNA4P22459 653 aa18.52■□□□□ 0.56
KRT42P-201ENST00000398469 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
KRT42P-201ENST00000398469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.51■□□□□ 0.55
KRT42P-201ENST00000398469 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
KRT42P-201ENST00000398469 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
KRT42P-201ENST00000398469 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
KRT42P-201ENST00000398469 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
KRT42P-201ENST00000398469 KDM6BO15054 1643 aa18.49■□□□□ 0.55
KRT42P-201ENST00000398469 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
KRT42P-201ENST00000398469 CCDC184Q52MB2 194 aa18.46■□□□□ 0.55
KRT42P-201ENST00000398469 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
KRT42P-201ENST00000398469 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
KRT42P-201ENST00000398469 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
KRT42P-201ENST00000398469 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
KRT42P-201ENST00000398469 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
KRT42P-201ENST00000398469 SENP3-EIF4A1A0A087X0R7 540 aa18.44■□□□□ 0.54
KRT42P-201ENST00000398469 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
KRT42P-201ENST00000398469 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
KRT42P-201ENST00000398469 UGGT2Q9NYU1 1516 aa18.42■□□□□ 0.54
KRT42P-201ENST00000398469 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
KRT42P-201ENST00000398469 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
KRT42P-201ENST00000398469 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
KRT42P-201ENST00000398469 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
KRT42P-201ENST00000398469 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
KRT42P-201ENST00000398469 FBLN2P98095 1184 aa18.4■□□□□ 0.54
KRT42P-201ENST00000398469 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
KRT42P-201ENST00000398469 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
KRT42P-201ENST00000398469 ZNF777Q9ULD5 760 aaPredicted RBP18.39■□□□□ 0.53
KRT42P-201ENST00000398469 NEFLP07196 543 aa18.38■□□□□ 0.53
KRT42P-201ENST00000398469 NBPF8Q3BBV2 869 aa18.37■□□□□ 0.53
KRT42P-201ENST00000398469 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms