RNA–Protein interactions for RNA: ENST00000398460.3

MEG3-201, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 3,382 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-201ENST00000398460 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
MEG3-201ENST00000398460 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
MEG3-201ENST00000398460 BCANQ96GW7 911 aa17.5■□□□□ 0.39
MEG3-201ENST00000398460 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
MEG3-201ENST00000398460 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
MEG3-201ENST00000398460 NESP48681 1621 aa17.47■□□□□ 0.39
MEG3-201ENST00000398460 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
MEG3-201ENST00000398460 LRRC9Q6ZRR7 1453 aa17.46■□□□□ 0.39
MEG3-201ENST00000398460 TIAM1Q13009 1591 aa17.46■□□□□ 0.39
MEG3-201ENST00000398460 PHLDB1Q86UU1 1377 aa17.46■□□□□ 0.38
MEG3-201ENST00000398460 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
MEG3-201ENST00000398460 ANP32EQ9BTT0 268 aa17.45■□□□□ 0.38
MEG3-201ENST00000398460 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
MEG3-201ENST00000398460 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
MEG3-201ENST00000398460 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
MEG3-201ENST00000398460 TDRD9Q8NDG6 1382 aaKnown RBP17.42■□□□□ 0.38
MEG3-201ENST00000398460 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
MEG3-201ENST00000398460 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
MEG3-201ENST00000398460 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
MEG3-201ENST00000398460 MTUS2Q5JR59 1369 aa17.38■□□□□ 0.37
MEG3-201ENST00000398460 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
MEG3-201ENST00000398460 PCF11O94913 1555 aaKnown RBP17.34■□□□□ 0.37
MEG3-201ENST00000398460 FMN1Q68DA7 1419 aa17.33■□□□□ 0.36
MEG3-201ENST00000398460 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
MEG3-201ENST00000398460 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
MEG3-201ENST00000398460 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
MEG3-201ENST00000398460 FYCO1Q9BQS8 1478 aa17.3■□□□□ 0.36
MEG3-201ENST00000398460 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
MEG3-201ENST00000398460 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
MEG3-201ENST00000398460 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
MEG3-201ENST00000398460 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
MEG3-201ENST00000398460 ARID3CA6NKF2 412 aa17.27■□□□□ 0.35
MEG3-201ENST00000398460 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
MEG3-201ENST00000398460 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
MEG3-201ENST00000398460 MAPKBP1O60336 1514 aa17.25■□□□□ 0.35
MEG3-201ENST00000398460 CUL7Q14999 1698 aa17.24■□□□□ 0.35
MEG3-201ENST00000398460 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
MEG3-201ENST00000398460 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
MEG3-201ENST00000398460 FKBP8Q14318 412 aa17.22■□□□□ 0.35
MEG3-201ENST00000398460 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
MEG3-201ENST00000398460 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.34
MEG3-201ENST00000398460 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
MEG3-201ENST00000398460 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
MEG3-201ENST00000398460 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
MEG3-201ENST00000398460 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
MEG3-201ENST00000398460 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
MEG3-201ENST00000398460 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
MEG3-201ENST00000398460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
MEG3-201ENST00000398460 WDR97A6NE52 1622 aa17.14■□□□□ 0.34
MEG3-201ENST00000398460 ANP32CO43423 234 aa17.14■□□□□ 0.33
MEG3-201ENST00000398460 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
MEG3-201ENST00000398460 CCDC18Q5T9S5 1454 aa17.13■□□□□ 0.33
MEG3-201ENST00000398460 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
MEG3-201ENST00000398460 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
MEG3-201ENST00000398460 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
MEG3-201ENST00000398460 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.32
MEG3-201ENST00000398460 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
MEG3-201ENST00000398460 PTPRKQ15262 1439 aa17.06■□□□□ 0.32
MEG3-201ENST00000398460 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
MEG3-201ENST00000398460 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
MEG3-201ENST00000398460 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
MEG3-201ENST00000398460 NAIPQ13075 1403 aa17.03■□□□□ 0.32
MEG3-201ENST00000398460 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.31
MEG3-201ENST00000398460 NEFLP07196 543 aa17.01■□□□□ 0.31
MEG3-201ENST00000398460 FBLN2P98095 1184 aa17.01■□□□□ 0.31
MEG3-201ENST00000398460 SAMD9Q5K651 1589 aa17.01■□□□□ 0.31
MEG3-201ENST00000398460 SUPT6HQ7KZ85 1726 aaKnown RBP16.99■□□□□ 0.31
MEG3-201ENST00000398460 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
MEG3-201ENST00000398460 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
MEG3-201ENST00000398460 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
MEG3-201ENST00000398460 FOXD1Q16676 465 aa16.95■□□□□ 0.3
MEG3-201ENST00000398460 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
MEG3-201ENST00000398460 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
MEG3-201ENST00000398460 IQGAP2Q13576 1575 aa16.94■□□□□ 0.3
MEG3-201ENST00000398460 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
MEG3-201ENST00000398460 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
MEG3-201ENST00000398460 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
MEG3-201ENST00000398460 CDK13Q14004 1512 aaKnown RBP16.94■□□□□ 0.3
MEG3-201ENST00000398460 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
MEG3-201ENST00000398460 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
MEG3-201ENST00000398460 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
MEG3-201ENST00000398460 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
MEG3-201ENST00000398460 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
MEG3-201ENST00000398460 UGGT2Q9NYU1 1516 aa16.92■□□□□ 0.3
MEG3-201ENST00000398460 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
MEG3-201ENST00000398460 MSH5O43196 834 aa16.92■□□□□ 0.3
MEG3-201ENST00000398460 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
MEG3-201ENST00000398460 MAGI3Q5TCQ9 1506 aa16.9■□□□□ 0.3
MEG3-201ENST00000398460 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
MEG3-201ENST00000398460 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.3
MEG3-201ENST00000398460 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
MEG3-201ENST00000398460 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
MEG3-201ENST00000398460 L3MBTL2Q969R5 705 aa16.87■□□□□ 0.29
MEG3-201ENST00000398460 CFDP1Q9UEE9 299 aaPredicted RBP16.86■□□□□ 0.29
MEG3-201ENST00000398460 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
MEG3-201ENST00000398460 LRRIQ1Q96JM4 1722 aa16.86■□□□□ 0.29
MEG3-201ENST00000398460 HNRNPUQ00839 825 aaKnown RBP eCLIP16.86■□□□□ 0.29
MEG3-201ENST00000398460 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
MEG3-201ENST00000398460 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
MEG3-201ENST00000398460 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms